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Items: 1 to 20 of 315

1.

ZDOCK and RDOCK performance in CAPRI rounds 3, 4, and 5.

Wiehe K, Pierce B, Mintseris J, Tong WW, Anderson R, Chen R, Weng Z.

Proteins. 2005 Aug 1;60(2):207-13.

PMID:
15981263
2.

Incorporation of flexibility into rigid-body docking: applications in rounds 3-5 of CAPRI.

Smith GR, Fitzjohn PW, Page CS, Bates PA.

Proteins. 2005 Aug 1;60(2):263-8.

PMID:
15981258
3.

The performance of ZDOCK and ZRANK in rounds 6-11 of CAPRI.

Wiehe K, Pierce B, Tong WW, Hwang H, Mintseris J, Weng Z.

Proteins. 2007 Dec 1;69(4):719-25.

PMID:
17803212
4.

Docking essential dynamics eigenstructures.

Mustard D, Ritchie DW.

Proteins. 2005 Aug 1;60(2):269-74.

PMID:
15981272
5.

Improving CAPRI predictions: optimized desolvation for rigid-body docking.

Fernández-Recio J, Abagyan R, Totrov M.

Proteins. 2005 Aug 1;60(2):308-13.

PMID:
15981266
7.

Geometry-based flexible and symmetric protein docking.

Schneidman-Duhovny D, Inbar Y, Nussinov R, Wolfson HJ.

Proteins. 2005 Aug 1;60(2):224-31.

PMID:
15981269
8.

Assessment of CAPRI predictions in rounds 3-5 shows progress in docking procedures.

Méndez R, Leplae R, Lensink MF, Wodak SJ.

Proteins. 2005 Aug 1;60(2):150-69.

PMID:
15981261
9.

Performance of the first protein docking server ClusPro in CAPRI rounds 3-5.

Comeau SR, Vajda S, Camacho CJ.

Proteins. 2005 Aug 1;60(2):239-44.

PMID:
15981265
10.
11.

Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI.

Carter P, Lesk VI, Islam SA, Sternberg MJ.

Proteins. 2005 Aug 1;60(2):281-8.

PMID:
15981271
12.

Approaching the CAPRI challenge with an efficient geometry-based docking.

Inbar Y, Schneidman-Duhovny D, Halperin I, Oron A, Nussinov R, Wolfson HJ.

Proteins. 2005 Aug 1;60(2):217-23.

PMID:
15981251
13.

Scoring docking models with evolutionary information.

Tress M, de Juan D, Graña O, Gómez MJ, Gómez-Puertas P, González JM, López G, Valencia A.

Proteins. 2005 Aug 1;60(2):275-80.

PMID:
15981273
14.

Data-driven docking: HADDOCK's adventures in CAPRI.

van Dijk AD, de Vries SJ, Dominguez C, Chen H, Zhou HX, Bonvin AM.

Proteins. 2005 Aug 1;60(2):232-8.

PMID:
15981252
15.

ATTRACT: protein-protein docking in CAPRI using a reduced protein model.

Zacharias M.

Proteins. 2005 Aug 1;60(2):252-6.

PMID:
15981270
17.

The targets of CAPRI rounds 3-5.

Janin J.

Proteins. 2005 Aug 1;60(2):170-5.

PMID:
15981267
18.

Development and testing of an automated approach to protein docking.

Tovchigrechko A, Vakser IA.

Proteins. 2005 Aug 1;60(2):296-301.

PMID:
15981259
19.

Protein-Protein Docking Benchmark 2.0: an update.

Mintseris J, Wiehe K, Pierce B, Anderson R, Chen R, Janin J, Weng Z.

Proteins. 2005 Aug 1;60(2):214-6.

PMID:
15981264
20.

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