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Items: 1 to 20 of 185

1.

The functional landscape of mouse gene expression.

Zhang W, Morris QD, Chang R, Shai O, Bakowski MA, Mitsakakis N, Mohammad N, Robinson MD, Zirngibl R, Somogyi E, Laurin N, Eftekharpour E, Sat E, Grigull J, Pan Q, Peng WT, Krogan N, Greenblatt J, Fehlings M, van der Kooy D, Aubin J, Bruneau BG, Rossant J, Blencowe BJ, Frey BJ, Hughes TR.

J Biol. 2004;3(5):21. Epub 2004 Dec 6.

3.

Where are we in genomics?

Hocquette JF.

J Physiol Pharmacol. 2005 Jun;56 Suppl 3:37-70. Review.

4.

Chicken skeletal muscle-associated macroarray for gene discovery.

Jorge EC, Melo CM, Rosário MF, Rossi JR, Ledur MC, Moura AS, Coutinho LL.

Genet Mol Res. 2010 Feb 2;9(1):188-207. doi: 10.4238/vol9-1gmr712.

5.

Gene set internal coherence in the context of functional profiling.

Montaner D, Minguez P, Al-Shahrour F, Dopazo J.

BMC Genomics. 2009 Apr 27;10:197. doi: 10.1186/1471-2164-10-197.

6.

Microarray-based discovery of highly expressed olfactory mucosal genes: potential roles in the various functions of the olfactory system.

Genter MB, Van Veldhoven PP, Jegga AG, Sakthivel B, Kong S, Stanley K, Witte DP, Ebert CL, Aronow BJ.

Physiol Genomics. 2003 Dec 16;16(1):67-81.

PMID:
14570983
7.

Extensive and divergent circadian gene expression in liver and heart.

Storch KF, Lipan O, Leykin I, Viswanathan N, Davis FC, Wong WH, Weitz CJ.

Nature. 2002 May 2;417(6884):78-83. Epub 2002 Apr 21. Erratum in: Nature 2002 Aug 8;418(6898):665.

PMID:
11967526
8.

Genomic approaches that aid in the identification of transcription factor target genes.

Kirmizis A, Farnham PJ.

Exp Biol Med (Maywood). 2004 Sep;229(8):705-21. Review.

PMID:
15337825
9.

CLEAN: CLustering Enrichment ANalysis.

Freudenberg JM, Joshi VK, Hu Z, Medvedovic M.

BMC Bioinformatics. 2009 Jul 29;10:234. doi: 10.1186/1471-2105-10-234.

10.

All systems GO for understanding mouse gene function.

Holmes C, Brown SD.

J Biol. 2004;3(5):20. Epub 2004 Dec 17. Review.

11.

Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles.

Prieto C, Risueño A, Fontanillo C, De las Rivas J.

PLoS One. 2008;3(12):e3911. doi: 10.1371/journal.pone.0003911. Epub 2008 Dec 15.

12.

Approaches for extracting practical information from gene co-expression networks in plant biology.

Aoki K, Ogata Y, Shibata D.

Plant Cell Physiol. 2007 Mar;48(3):381-90. Epub 2007 Jan 23. Review.

PMID:
17251202
13.

Gene expression profiling in the striatum of inbred mouse strains with distinct opioid-related phenotypes.

Korostynski M, Kaminska-Chowaniec D, Piechota M, Przewlocki R.

BMC Genomics. 2006 Jun 13;7:146.

14.

Functional genomics of the chicken--a model organism.

Cogburn LA, Porter TE, Duclos MJ, Simon J, Burgess SC, Zhu JJ, Cheng HH, Dodgson JB, Burnside J.

Poult Sci. 2007 Oct;86(10):2059-94. Review.

PMID:
17878436
15.

Co-regulation of mouse genes predicts function.

Weitzman JB.

J Biol. 2004;3(5):19. Epub 2004 Dec 6. No abstract available.

16.
17.

Significant and systematic expression differentiation in long-lived yeast strains.

Cheng C, Fabrizio P, Ge H, Wei M, Longo VD, Li LM.

PLoS One. 2007 Oct 31;2(10):e1095.

18.

Broad profiling of DNA-binding transcription factor activities improves regulatory network construction in adult mouse tissues.

Sun YM, Zhang Y, Zeng LQ, Wu JP, Wei L, Ren AH, Shao W, Qiao JY, Zhao YC, Zhang L, Mitchelson KR, Cheng J.

J Proteome Res. 2008 Oct;7(10):4455-64. doi: 10.1021/pr800417e. Epub 2008 Aug 30.

PMID:
18759473
19.

A comprehensive functional analysis of tissue specificity of human gene expression.

Dezso Z, Nikolsky Y, Sviridov E, Shi W, Serebriyskaya T, Dosymbekov D, Bugrim A, Rakhmatulin E, Brennan RJ, Guryanov A, Li K, Blake J, Samaha RR, Nikolskaya T.

BMC Biol. 2008 Nov 12;6:49. doi: 10.1186/1741-7007-6-49.

20.

Genome-wide atlas of gene expression in the adult mouse brain.

Lein ES, Hawrylycz MJ, Ao N, Ayres M, Bensinger A, Bernard A, Boe AF, Boguski MS, Brockway KS, Byrnes EJ, Chen L, Chen L, Chen TM, Chin MC, Chong J, Crook BE, Czaplinska A, Dang CN, Datta S, Dee NR, Desaki AL, Desta T, Diep E, Dolbeare TA, Donelan MJ, Dong HW, Dougherty JG, Duncan BJ, Ebbert AJ, Eichele G, Estin LK, Faber C, Facer BA, Fields R, Fischer SR, Fliss TP, Frensley C, Gates SN, Glattfelder KJ, Halverson KR, Hart MR, Hohmann JG, Howell MP, Jeung DP, Johnson RA, Karr PT, Kawal R, Kidney JM, Knapik RH, Kuan CL, Lake JH, Laramee AR, Larsen KD, Lau C, Lemon TA, Liang AJ, Liu Y, Luong LT, Michaels J, Morgan JJ, Morgan RJ, Mortrud MT, Mosqueda NF, Ng LL, Ng R, Orta GJ, Overly CC, Pak TH, Parry SE, Pathak SD, Pearson OC, Puchalski RB, Riley ZL, Rockett HR, Rowland SA, Royall JJ, Ruiz MJ, Sarno NR, Schaffnit K, Shapovalova NV, Sivisay T, Slaughterbeck CR, Smith SC, Smith KA, Smith BI, Sodt AJ, Stewart NN, Stumpf KR, Sunkin SM, Sutram M, Tam A, Teemer CD, Thaller C, Thompson CL, Varnam LR, Visel A, Whitlock RM, Wohnoutka PE, Wolkey CK, Wong VY, Wood M, Yaylaoglu MB, Young RC, Youngstrom BL, Yuan XF, Zhang B, Zwingman TA, Jones AR.

Nature. 2007 Jan 11;445(7124):168-76. Epub 2006 Dec 6.

PMID:
17151600

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