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Items: 1 to 20 of 76

1.

Analysis of among-site variation in substitution patterns.

Krishnan NM, Raina SZ, Pollock DD.

Biol Proced Online. 2004;6:180-188. Epub 2004 Sep 3.

2.

Detecting gradients of asymmetry in site-specific substitutions in mitochondrial genomes.

Krishnan NM, Seligmann H, Raina SZ, Pollock DD.

DNA Cell Biol. 2004 Oct;23(10):707-14.

3.
4.

New views on strand asymmetry in insect mitochondrial genomes.

Wei SJ, Shi M, Chen XX, Sharkey MJ, van Achterberg C, Ye GY, He JH.

PLoS One. 2010 Sep 15;5(9):e12708. doi: 10.1371/journal.pone.0012708.

6.

Possible multiple origins of replication in primate mitochondria: Alternative role of tRNA sequences.

Seligmann H, Krishnan NM, Rao BJ.

J Theor Biol. 2006 Jul 21;241(2):321-32. Epub 2006 Jan 23.

PMID:
16430924
7.

Transcription-induced mutational strand bias and its effect on substitution rates in human genes.

Mugal CF, von Grünberg HH, Peifer M.

Mol Biol Evol. 2009 Jan;26(1):131-42. doi: 10.1093/molbev/msn245. Epub 2008 Oct 29.

PMID:
18974087
8.

Evolution of base-substitution gradients in primate mitochondrial genomes.

Raina SZ, Faith JJ, Disotell TR, Seligmann H, Stewart CB, Pollock DD.

Genome Res. 2005 May;15(5):665-73.

9.

Phylogenetic analysis of mitochondrial substitution rate variation in the angiosperm tribe Sileneae.

Sloan DB, Oxelman B, Rautenberg A, Taylor DR.

BMC Evol Biol. 2009 Oct 31;9:260. doi: 10.1186/1471-2148-9-260. Erratum in: BMC Evol Biol. 2010;10:12.

10.
11.

Correlated evolution of nucleotide substitution rates and allelic variation in Mhc-DRB lineages of primates.

Garamszegi LZ, de Groot NG, Bontrop RE.

BMC Evol Biol. 2009 Apr 12;9:73. doi: 10.1186/1471-2148-9-73.

12.

Spatial covariation of mutation and nonsynonymous substitution rates in vertebrate mitochondrial genomes.

Broughton RE, Reneau PC.

Mol Biol Evol. 2006 Aug;23(8):1516-24. Epub 2006 May 16.

PMID:
16705079
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16.

Mitochondrial tRNA sequences as unusual replication origins: pathogenic implications for Homo sapiens.

Seligmann H, Krishnan NM, Rao BJ.

J Theor Biol. 2006 Dec 7;243(3):375-85. Epub 2006 Jul 1.

PMID:
16905154
17.

Similar compositional biases are caused by very different mutational effects.

Rocha EP, Touchon M, Feil EJ.

Genome Res. 2006 Dec;16(12):1537-47. Epub 2006 Oct 26.

20.

Relaxed clocks and inferences of heterogeneous patterns of nucleotide substitution and divergence time estimates across whales and dolphins (Mammalia: Cetacea).

Dornburg A, Brandley MC, McGowen MR, Near TJ.

Mol Biol Evol. 2012 Feb;29(2):721-36. doi: 10.1093/molbev/msr228. Epub 2011 Sep 15.

PMID:
21926070

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