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Items: 1 to 20 of 165

1.

Extracting phenotypic information from the literature via natural language processing.

Chen L, Friedman C.

Stud Health Technol Inform. 2004;107(Pt 2):758-62.

PMID:
15360914
2.
3.

Natural language processing and visualization in the molecular imaging domain.

Tulipano PK, Tao Y, Millar WS, Zanzonico P, Kolbert K, Xu H, Yu H, Chen L, Lussier YA, Friedman C.

J Biomed Inform. 2007 Jun;40(3):270-81.

4.

GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles.

Friedman C, Kra P, Yu H, Krauthammer M, Rzhetsky A.

Bioinformatics. 2001;17 Suppl 1:S74-82.

5.

Learning ontological rules to extract multiple relations of genic interactions from text.

Manine AP, Alphonse E, Bessières P.

Int J Med Inform. 2009 Dec;78(12):e31-8. doi: 10.1016/j.ijmedinf.2009.03.005.

PMID:
19398370
6.

Facilitating cancer research using natural language processing of pathology reports.

Xu H, Anderson K, Grann VR, Friedman C.

Stud Health Technol Inform. 2004;107(Pt 1):565-72.

PMID:
15360876
7.

A hybrid method for relation extraction from biomedical literature.

Huang M, Zhu X, Li M.

Int J Med Inform. 2006 Jun;75(6):443-55.

PMID:
16095962
9.

Two biomedical sublanguages: a description based on the theories of Zellig Harris.

Friedman C, Kra P, Rzhetsky A.

J Biomed Inform. 2002 Aug;35(4):222-35. Review.

PMID:
12755517
10.

Online tools to support literature-based discovery in the life sciences.

Weeber M, Kors JA, Mons B.

Brief Bioinform. 2005 Sep;6(3):277-86. Review.

11.

PhenoGO: assigning phenotypic context to gene ontology annotations with natural language processing.

Lussier Y, Borlawsky T, Rappaport D, Liu Y, Friedman C.

Pac Symp Biocomput. 2006:64-75.

12.

Extracting information from textual documents in the electronic health record: a review of recent research.

Meystre SM, Savova GK, Kipper-Schuler KC, Hurdle JF.

Yearb Med Inform. 2008:128-44. Review.

PMID:
18660887
13.
14.

Biomedical literature mining: challenges and solutions in the 'omics' era.

Chaussabel D.

Am J Pharmacogenomics. 2004;4(6):383-93.

PMID:
15651899
15.
16.

Natural language processing and its future in medicine.

Friedman C, Hripcsak G.

Acad Med. 1999 Aug;74(8):890-5.

PMID:
10495728
17.

OSIRISv1.2: a named entity recognition system for sequence variants of genes in biomedical literature.

Furlong LI, Dach H, Hofmann-Apitius M, Sanz F.

BMC Bioinformatics. 2008 Feb 5;9:84. doi: 10.1186/1471-2105-9-84.

18.

Text mining and ontologies in biomedicine: making sense of raw text.

Spasic I, Ananiadou S, McNaught J, Kumar A.

Brief Bioinform. 2005 Sep;6(3):239-51. Review.

19.

Developing an NLP and IR-based algorithm for analyzing gene-disease relationships.

Yen YT, Chen B, Chiu HW, Lee YC, Li YC, Hsu CY.

Methods Inf Med. 2006;45(3):321-9.

PMID:
16685344
20.
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