Format
Sort by

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 333

1.

Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets.

Wang XJ, Reyes JL, Chua NH, Gaasterland T.

Genome Biol. 2004;5(9):R65. Epub 2004 Aug 31.

2.

Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends.

German MA, Pillay M, Jeong DH, Hetawal A, Luo S, Janardhanan P, Kannan V, Rymarquis LA, Nobuta K, German R, De Paoli E, Lu C, Schroth G, Meyers BC, Green PJ.

Nat Biotechnol. 2008 Aug;26(8):941-6. doi: 10.1038/nbt1417. Epub 2008 Jun 9.

PMID:
18542052
3.

Detection of 91 potential conserved plant microRNAs in Arabidopsis thaliana and Oryza sativa identifies important target genes.

Bonnet E, Wuyts J, Rouzé P, Van de Peer Y.

Proc Natl Acad Sci U S A. 2004 Aug 3;101(31):11511-6. Epub 2004 Jul 22. Erratum in: Proc Natl Acad Sci U S A. 2005 Mar 22;102(12):4655.

4.

Identification of miRNAs and their target genes in developing maize ears by combined small RNA and degradome sequencing.

Liu H, Qin C, Chen Z, Zuo T, Yang X, Zhou H, Xu M, Cao S, Shen Y, Lin H, He X, Zhang Y, Li L, Ding H, Lübberstedt T, Zhang Z, Pan G.

BMC Genomics. 2014 Jan 14;15:25. doi: 10.1186/1471-2164-15-25.

5.

Cloning and characterization of microRNAs from rice.

Sunkar R, Girke T, Jain PK, Zhu JK.

Plant Cell. 2005 May;17(5):1397-411. Epub 2005 Apr 1.

6.

Comprehensive analysis of small RNA-seq data reveals that combination of miRNA with its isomiRs increase the accuracy of target prediction in Arabidopsis thaliana.

Ahmed F, Senthil-Kumar M, Lee S, Dai X, Mysore KS, Zhao PX.

RNA Biol. 2014;11(11):1414-29. doi: 10.1080/15476286.2014.996474.

7.
8.
9.

Transcriptome-wide identification of microRNA targets in rice.

Li YF, Zheng Y, Addo-Quaye C, Zhang L, Saini A, Jagadeeswaran G, Axtell MJ, Zhang W, Sunkar R.

Plant J. 2010 Jun 1;62(5):742-59. doi: 10.1111/j.1365-313X.2010.04187.x. Epub 2010 Feb 26.

10.

Conservation and divergence of microRNAs in Populus.

Barakat A, Wall PK, Diloreto S, Depamphilis CW, Carlson JE.

BMC Genomics. 2007 Dec 31;8:481. doi: 10.1186/1471-2164-8-481.

11.

Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins.

Merchan F, Boualem A, Crespi M, Frugier F.

Genome Biol. 2009;10(12):R136. doi: 10.1186/gb-2009-10-12-r136. Epub 2009 Dec 1.

12.

Identification and profiling of novel microRNAs in the Brassica rapa genome based on small RNA deep sequencing.

Kim B, Yu HJ, Park SG, Shin JY, Oh M, Kim N, Mun JH.

BMC Plant Biol. 2012 Nov 19;12:218. doi: 10.1186/1471-2229-12-218.

13.

Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana.

Wang XJ, Gaasterland T, Chua NH.

Genome Biol. 2005;6(4):R30. Epub 2005 Mar 15.

14.

SeqTar: an effective method for identifying microRNA guided cleavage sites from degradome of polyadenylated transcripts in plants.

Zheng Y, Li YF, Sunkar R, Zhang W.

Nucleic Acids Res. 2012 Feb;40(4):e28. doi: 10.1093/nar/gkr1092. Epub 2011 Dec 2.

15.

Computational prediction of miRNAs in Arabidopsis thaliana.

Adai A, Johnson C, Mlotshwa S, Archer-Evans S, Manocha V, Vance V, Sundaresan V.

Genome Res. 2005 Jan;15(1):78-91.

16.

Identification of soybean seed developmental stage-specific and tissue-specific miRNA targets by degradome sequencing.

Shamimuzzaman M, Vodkin L.

BMC Genomics. 2012 Jul 16;13:310. doi: 10.1186/1471-2164-13-310.

17.

Computational identification of novel microRNAs and targets in Brassica napus.

Xie FL, Huang SQ, Guo K, Xiang AL, Zhu YY, Nie L, Yang ZM.

FEBS Lett. 2007 Apr 3;581(7):1464-74. Epub 2007 Mar 8.

18.

Alternative mRNA processing increases the complexity of microRNA-based gene regulation in Arabidopsis.

Yang X, Zhang H, Li L.

Plant J. 2012 May;70(3):421-31. doi: 10.1111/j.1365-313X.2011.04882.x. Epub 2012 Jan 16.

19.

Identification of miRNAs and their targets in wheat (Triticum aestivum L.) by EST analysis.

Han J, Kong ML, Xie H, Sun QP, Nan ZJ, Zhang QZ, Pan JB.

Genet Mol Res. 2013 Sep 19;12(3):3793-805. doi: 10.4238/2013.September.19.11.

20.

Identification of the highly accumulated microRNA*s in Arabidopsis (Arabidopsis thaliana) and rice (Oryza sativa).

Shao C, Ma X, Xu X, Meng Y.

Gene. 2013 Feb 15;515(1):123-7. doi: 10.1016/j.gene.2012.11.015. Epub 2012 Nov 29.

PMID:
23201415
Items per page

Supplemental Content

Write to the Help Desk