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Items: 1 to 20 of 94

1.

Evolution of eukaryotic gene repertoire and gene structure: discovering the unexpected dynamics of genome evolution.

Rogozin IB, Babenko VN, Fedorova ND, Jackson JD, Jacobs AR, Krylov DM, Makarova KS, Mazumder R, Mekhedov SL, Mirkin BG, Nikolskaya AN, Rao BS, Smirnov S, Sorokin AV, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA, Koonin EV.

Cold Spring Harb Symp Quant Biol. 2003;68:293-301. No abstract available.

PMID:
15338629
2.
3.

Footprints of primordial introns on the eukaryotic genome: still no clear traces.

Wolf YI, Kondrashov FA, Koonin EV.

Trends Genet. 2001 Sep;17(9):499-501. No abstract available.

PMID:
11721681
4.

Evolutionary biology: Early evolution comes full circle.

Martin W, Embley TM.

Nature. 2004 Sep 9;431(7005):134-7. No abstract available.

PMID:
15356611
5.

Analysis of evolution of exon-intron structure of eukaryotic genes.

Rogozin IB, Sverdlov AV, Babenko VN, Koonin EV.

Brief Bioinform. 2005 Jun;6(2):118-34. Review.

PMID:
15975222
6.

Complex early genes.

Roy SW, Gilbert W.

Proc Natl Acad Sci U S A. 2005 Feb 8;102(6):1986-91. Epub 2005 Feb 1.

7.

Myosin repertoire expansion coincides with eukaryotic diversification in the Mesoproterozoic era.

Kollmar M, Mühlhausen S.

BMC Evol Biol. 2017 Sep 4;17(1):211. doi: 10.1186/s12862-017-1056-2.

8.

Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.

Putnam NH, Srivastava M, Hellsten U, Dirks B, Chapman J, Salamov A, Terry A, Shapiro H, Lindquist E, Kapitonov VV, Jurka J, Genikhovich G, Grigoriev IV, Lucas SM, Steele RE, Finnerty JR, Technau U, Martindale MQ, Rokhsar DS.

Science. 2007 Jul 6;317(5834):86-94.

9.

Spliceosomal introns: new insights into their evolution.

Zhaxybayeva O, Gogarten JP.

Curr Biol. 2003 Sep 30;13(19):R764-6. Review.

10.

The genome reduction hypothesis and the phylogeny of eukaryotes.

Bapteste E, Gribaldo S.

Trends Genet. 2003 Dec;19(12):696-700. Review. No abstract available.

PMID:
14642750
11.

Coevolution of genomic intron number and splice sites.

Irimia M, Penny D, Roy SW.

Trends Genet. 2007 Jul;23(7):321-5. Epub 2007 Apr 18. Review.

PMID:
17442445
12.

Intron-rich ancestors.

Roy SW.

Trends Genet. 2006 Sep;22(9):468-71. Epub 2006 Jul 20. Review.

PMID:
16857287
13.

Eukaryotic evolution: early origin of canonical introns.

Simpson AG, MacQuarrie EK, Roger AJ.

Nature. 2002 Sep 19;419(6904):270.

PMID:
12239559
14.

Rates of intron loss and gain: implications for early eukaryotic evolution.

Roy SW, Gilbert W.

Proc Natl Acad Sci U S A. 2005 Apr 19;102(16):5773-8. Epub 2005 Apr 12.

15.

Function-selective domain architecture plasticity potentials in eukaryotic genome evolution.

Linkeviciute V, Rackham OJ, Gough J, Oates ME, Fang H.

Biochimie. 2015 Dec;119:269-77. doi: 10.1016/j.biochi.2015.05.003. Epub 2015 May 15.

16.
17.

Spliceosomal introns as tools for genomic and evolutionary analysis.

Irimia M, Roy SW.

Nucleic Acids Res. 2008 Mar;36(5):1703-12. doi: 10.1093/nar/gkn012. Epub 2008 Feb 7. Review.

18.

Origin and evolution of spliceosomal introns.

Rogozin IB, Carmel L, Csuros M, Koonin EV.

Biol Direct. 2012 Apr 16;7:11. doi: 10.1186/1745-6150-7-11. Review.

19.

Messenger RNA surveillance and the evolutionary proliferation of introns.

Lynch M, Kewalramani A.

Mol Biol Evol. 2003 Apr;20(4):563-71. Epub 2003 Mar 5. Review.

PMID:
12654936
20.

The pattern of intron loss.

Roy SW, Gilbert W.

Proc Natl Acad Sci U S A. 2005 Jan 18;102(3):713-8. Epub 2005 Jan 10.

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