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Items: 1 to 20 of 147

1.

Generation of a large gene/protein lexicon by morphological pattern analysis.

Tanabe L, Wilbur WJ.

J Bioinform Comput Biol. 2004 Jan;1(4):611-26.

PMID:
15290756
2.

Identification of related gene/protein names based on an HMM of name variations.

Yeganova L, Smith L, Wilbur WJ.

Comput Biol Chem. 2004 Apr;28(2):97-107.

PMID:
15130538
3.

Tagging gene and protein names in biomedical text.

Tanabe L, Wilbur WJ.

Bioinformatics. 2002 Aug;18(8):1124-32.

PMID:
12176836
4.
5.
6.

GAPSCORE: finding gene and protein names one word at a time.

Chang JT, Schütze H, Altman RB.

Bioinformatics. 2004 Jan 22;20(2):216-25.

PMID:
14734313
7.

Gene name identification and normalization using a model organism database.

Morgan AA, Hirschman L, Colosimo M, Yeh AS, Colombe JB.

J Biomed Inform. 2004 Dec;37(6):396-410.

8.

Automatically identifying gene/protein terms in MEDLINE abstracts.

Yu H, Hatzivassiloglou V, Rzhetsky A, Wilbur WJ.

J Biomed Inform. 2002 Oct-Dec;35(5-6):322-30.

PMID:
12968781
9.

Suregene, a scalable system for automated term disambiguation of gene and protein names.

Podowski RM, Cleary JG, Goncharoff NT, Amoutzias G, Hayes WS.

J Bioinform Comput Biol. 2005 Jun;3(3):743-70.

PMID:
16108092
10.

Using name-internal and contextual features to classify biological terms.

Torii M, Kamboj S, Vijay-Shanker K.

J Biomed Inform. 2004 Dec;37(6):498-511.

11.

Use of morphological analysis in protein name recognition.

Yamamoto K, Kudo T, Konagaya A, Matsumoto Y.

J Biomed Inform. 2004 Dec;37(6):471-82.

12.

Gene name ambiguity of eukaryotic nomenclatures.

Chen L, Liu H, Friedman C.

Bioinformatics. 2005 Jan 15;21(2):248-56. Epub 2004 Aug 27.

PMID:
15333458
13.

GENETAG: a tagged corpus for gene/protein named entity recognition.

Tanabe L, Xie N, Thom LH, Matten W, Wilbur WJ.

BMC Bioinformatics. 2005;6 Suppl 1:S3. Epub 2005 May 24.

14.

Automated recognition of malignancy mentions in biomedical literature.

Jin Y, McDonald RT, Lerman K, Mandel MA, Carroll S, Liberman MY, Pereira FC, Winters RS, White PS.

BMC Bioinformatics. 2006 Nov 7;7:492.

15.

Protein names and how to find them.

Franzén K, Eriksson G, Olsson F, Asker L, Lidén P, Cöster J.

Int J Med Inform. 2002 Dec 4;67(1-3):49-61.

PMID:
12460631
16.

Large-scale extraction of gene regulation for model organisms in an ontological context.

Saric J, Jensen LJ, Rojas I.

In Silico Biol. 2005;5(1):21-32.

PMID:
15972005
17.

Disambiguating proteins, genes, and RNA in text: a machine learning approach.

Hatzivassiloglou V, Duboué PA, Rzhetsky A.

Bioinformatics. 2001;17 Suppl 1:S97-106.

PMID:
11472998
18.

Enhancing HMM-based biomedical named entity recognition by studying special phenomena.

Zhang J, Shen D, Zhou G, Su J, Tan CL.

J Biomed Inform. 2004 Dec;37(6):411-22.

20.

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