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Items: 1 to 20 of 124

1.

Lineage-specific gene duplication and loss in human and great ape evolution.

Fortna A, Kim Y, MacLaren E, Marshall K, Hahn G, Meltesen L, Brenton M, Hink R, Burgers S, Hernandez-Boussard T, Karimpour-Fard A, Glueck D, McGavran L, Berry R, Pollack J, Sikela JM.

PLoS Biol. 2004 Jul;2(7):E207. Epub 2004 Jul 13.

2.

Large-scale variation among human and great ape genomes determined by array comparative genomic hybridization.

Locke DP, Segraves R, Carbone L, Archidiacono N, Albertson DG, Pinkel D, Eichler EE.

Genome Res. 2003 Mar;13(3):347-57.

3.

Gene copy number variation spanning 60 million years of human and primate evolution.

Dumas L, Kim YH, Karimpour-Fard A, Cox M, Hopkins J, Pollack JR, Sikela JM.

Genome Res. 2007 Sep;17(9):1266-77. Epub 2007 Jul 31.

4.

Identification of large-scale human-specific copy number differences by inter-species array comparative genomic hybridization.

Goidts V, Armengol L, Schempp W, Conroy J, Nowak N, Müller S, Cooper DN, Estivill X, Enard W, Szamalek JM, Hameister H, Kehrer-Sawatzki H.

Hum Genet. 2006 Mar;119(1-2):185-98. Epub 2006 Jan 5.

PMID:
16395594
6.

Species-specific evolution of repeated DNA sequences in great apes.

Toder R, Grützner F, Haaf T, Bausch E.

Chromosome Res. 2001;9(6):431-5.

PMID:
11592477
7.

Duplication of a gene-rich cluster between 16p11.1 and Xq28: a novel pericentromeric-directed mechanism for paralogous genome evolution.

Eichler EE, Lu F, Shen Y, Antonacci R, Jurecic V, Doggett NA, Moyzis RK, Baldini A, Gibbs RA, Nelson DL.

Hum Mol Genet. 1996 Jul;5(7):899-912.

PMID:
8817324
8.

A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications.

She X, Liu G, Ventura M, Zhao S, Misceo D, Roberto R, Cardone MF, Rocchi M; NISC Comparative Sequencing Program, Green ED, Archidiacano N, Eichler EE.

Genome Res. 2006 May;16(5):576-83. Epub 2006 Apr 10.

9.

A non-human primate BAC resource to study interchromosomal segmental duplications.

Kirsch S, Hodler C, Schempp W.

Cytogenet Genome Res. 2009;125(4):253-9. doi: 10.1159/000235930. Epub 2009 Oct 27.

PMID:
19864887
10.

Using a pericentromeric interspersed repeat to recapitulate the phylogeny and expansion of human centromeric segmental duplications.

Horvath JE, Gulden CL, Bailey JA, Yohn C, McPherson JD, Prescott A, Roe BA, de Jong PJ, Ventura M, Misceo D, Archidiacono N, Zhao S, Schwartz S, Rocchi M, Eichler EE.

Mol Biol Evol. 2003 Sep;20(9):1463-79. Epub 2003 May 30.

PMID:
12777517
11.

Evolution of beta satellite DNA sequences: evidence for duplication-mediated repeat amplification and spreading.

Cardone MF, Ballarati L, Ventura M, Rocchi M, Marozzi A, Ginelli E, Meneveri R.

Mol Biol Evol. 2004 Sep;21(9):1792-9. Epub 2004 Jun 16.

PMID:
15201396
12.

Lineage-specific duplication and loss of pepsinogen genes in hominoid evolution.

Narita Y, Oda S, Takenaka O, Kageyama T.

J Mol Evol. 2010 Apr;70(4):313-24. doi: 10.1007/s00239-010-9320-8. Epub 2010 Mar 27.

PMID:
20349055
13.

A cascade of complex subtelomeric duplications during the evolution of the hominoid and Old World monkey genomes.

van Geel M, Eichler EE, Beck AF, Shan Z, Haaf T, van der Maarel SM, Frants RR, de Jong PJ.

Am J Hum Genet. 2002 Jan;70(1):269-78. Epub 2001 Nov 30.

14.

Hominoid lineage specific amplification of low-copy repeats on 22q11.2 (LCR22s) associated with velo-cardio-facial/digeorge syndrome.

Babcock M, Yatsenko S, Hopkins J, Brenton M, Cao Q, de Jong P, Stankiewicz P, Lupski JR, Sikela JM, Morrow BE.

Hum Mol Genet. 2007 Nov 1;16(21):2560-71. Epub 2007 Aug 3.

PMID:
17675367
15.

High divergence in primate-specific duplicated regions: human and chimpanzee chorionic gonadotropin beta genes.

Hallast P, Saarela J, Palotie A, Laan M.

BMC Evol Biol. 2008 Jul 7;8:195. doi: 10.1186/1471-2148-8-195.

16.

Emergence of the keratinocyte growth factor multigene family during the great ape radiation.

Kelley MJ, Pech M, Seuanez HN, Rubin JS, O'Brien SJ, Aaronson SA.

Proc Natl Acad Sci U S A. 1992 Oct 1;89(19):9287-91.

17.

Recurrent duplication-driven transposition of DNA during hominoid evolution.

Johnson ME; National Institute of Health Intramural Sequencing Center Comparative Sequencing Program, Cheng Z, Morrison VA, Scherer S, Ventura M, Gibbs RA, Green ED, Eichler EE.

Proc Natl Acad Sci U S A. 2006 Nov 21;103(47):17626-31. Epub 2006 Nov 13.

18.

Copy number variation and evolution in humans and chimpanzees.

Perry GH, Yang F, Marques-Bonet T, Murphy C, Fitzgerald T, Lee AS, Hyland C, Stone AC, Hurles ME, Tyler-Smith C, Eichler EE, Carter NP, Lee C, Redon R.

Genome Res. 2008 Nov;18(11):1698-710. doi: 10.1101/gr.082016.108. Epub 2008 Sep 4.

19.

Fluorescence in situ hybridization analysis of keratinocyte growth factor gene amplification and dispersion in evolution of great apes and humans.

Zimonjic DB, Kelley MJ, Rubin JS, Aaronson SA, Popescu NC.

Proc Natl Acad Sci U S A. 1997 Oct 14;94(21):11461-5.

20.

Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution.

Jiang Z, Tang H, Ventura M, Cardone MF, Marques-Bonet T, She X, Pevzner PA, Eichler EE.

Nat Genet. 2007 Nov;39(11):1361-8. Epub 2007 Oct 7.

PMID:
17922013

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