Similar articles for PMID: 15110839

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1

S1 subsite in snake venom thrombin-like enzymes: can S1 subsite lipophilicity be used to sort binding affinities of trypsin-like enzymes to small-molecule inhibitors?

Silva FP Jr, De-Simone SG. Silva FP Jr, et al. Bioorg Med Chem. 2004 May 15;12(10):2571-87. doi: 10.1016/j.bmc.2004.03.024. Bioorg Med Chem. 2004. PMID: 15110839

2

Predicted three-dimensional structural models of venom serine protease inhibitors and their interactions with trypsin and chymotrypsin.

Azim MK, Grossmann JG, Zaidi ZH. Azim MK, et al. J Nat Toxins. 1999 Oct;8(3):363-84. J Nat Toxins. 1999. PMID: 10591040

3

The Na+ binding channel of human coagulation proteases: novel insights on the structure and allosteric modulation revealed by molecular surface analysis.

Silva FP Jr, Antunes OA, de Alencastro RB, De Simone SG. Silva FP Jr, et al. Biophys Chem. 2006 Feb 1;119(3):282-94. doi: 10.1016/j.bpc.2005.10.001. Epub 2005 Nov 9. Biophys Chem. 2006. PMID: 16288954

4

Biochemical and molecular modeling analysis of the ability of two p-aminobenzamidine-based sorbents to selectively purify serine proteases (fibrinogenases) from snake venoms.

De-Simone SG, Correa-Netto C, Antunes OA, De-Alencastro RB, Silva FP Jr. De-Simone SG, et al. J Chromatogr B Analyt Technol Biomed Life Sci. 2005 Aug 5;822(1-2):1-9. doi: 10.1016/j.jchromb.2005.04.018. J Chromatogr B Analyt Technol Biomed Life Sci. 2005. PMID: 15994137

5

A novel serine protease inhibition motif involving a multi-centered short hydrogen bonding network at the active site.

Katz BA, Elrod K, Luong C, Rice MJ, Mackman RL, Sprengeler PA, Spencer J, Hataye J, Janc J, Link J, Litvak J, Rai R, Rice K, Sideris S, Verner E, Young W. Katz BA, et al. J Mol Biol. 2001 Apr 13;307(5):1451-86. doi: 10.1006/jmbi.2001.4516. J Mol Biol. 2001. PMID: 11292354

6

Structural features of a snake venom thrombin-like enzyme: thrombin and trypsin on a single catalytic platform?

Castro HC, Silva DM, Craik C, Zingali RB. Castro HC, et al. Biochim Biophys Acta. 2001 Jun 11;1547(2):183-95. doi: 10.1016/s0167-4838(01)00177-7. Biochim Biophys Acta. 2001. PMID: 11410274

7

In-depth study of tripeptide-based alpha-ketoheterocycles as inhibitors of thrombin. Effective utilization of the S1' subsite and its implications to structure-based drug design.

Costanzo MJ, Almond HR Jr, Hecker LR, Schott MR, Yabut SC, Zhang HC, Andrade-Gordon P, Corcoran TW, Giardino EC, Kauffman JA, Lewis JM, de Garavilla L, Haertlein BJ, Maryanoff BE. Costanzo MJ, et al. J Med Chem. 2005 Mar 24;48(6):1984-2008. doi: 10.1021/jm0303857. J Med Chem. 2005. PMID: 15771442

8

Highly selective mechanism-based thrombin inhibitors: structures of thrombin and trypsin inhibited with rigid peptidyl aldehydes.

Krishnan R, Zhang E, Hakansson K, Arni RK, Tulinsky A, Lim-Wilby MS, Levy OE, Semple JE, Brunck TK. Krishnan R, et al. Biochemistry. 1998 Sep 1;37(35):12094-103. doi: 10.1021/bi980840e. Biochemistry. 1998. PMID: 9724521

9

Identification of the substrate-binding exosites of two snake venom serine proteinases: molecular basis for the partition of two essential functions of thrombin.

Maroun RC, Serrano SM. Maroun RC, et al. J Mol Recognit. 2004 Jan-Feb;17(1):51-61. doi: 10.1002/jmr.644. J Mol Recognit. 2004. PMID: 14872537

10

Molecular cloning and expression of a functional snake venom serine proteinase, with platelet aggregating activity, from the Cerastes cerastes viper.

Dekhil H, Wisner A, Marrakchi N, El Ayeb M, Bon C, Karoui H. Dekhil H, et al. Biochemistry. 2003 Sep 16;42(36):10609-18. doi: 10.1021/bi034790b. Biochemistry. 2003. PMID: 12962484

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