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Items: 1 to 20 of 202

1.

Comparing the base usage frequency between bacteria DNA double strand.

Zhong D, Zhao GJ, Zhang ZS, Lin JH, Qin TN, Xu AL.

Yi Chuan Xue Bao. 2003 Feb;30(2):189-92.

PMID:
12776609
2.

Same-strand overlapping genes in bacteria: compositional determinants of phase bias.

Sabath N, Graur D, Landan G.

Biol Direct. 2008 Aug 21;3:36. doi: 10.1186/1745-6150-3-36.

3.

Nucleotide compositional asymmetry between the leading and lagging strands of eubacterial genomes.

Qu H, Wu H, Zhang T, Zhang Z, Hu S, Yu J.

Res Microbiol. 2010 Dec;161(10):838-46. doi: 10.1016/j.resmic.2010.09.015. Epub 2010 Sep 22.

PMID:
20868744
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Mutation and selection on the anticodon of tRNA genes in vertebrate mitochondrial genomes.

Xia X.

Gene. 2005 Jan 17;345(1):13-20. Epub 2004 Dec 19.

PMID:
15716092
7.

Proteome composition and codon usage in spirochaetes: species-specific and DNA strand-specific mutational biases.

Lafay B, Lloyd AT, McLean MJ, Devine KM, Sharp PM, Wolfe KH.

Nucleic Acids Res. 1999 Apr 1;27(7):1642-9.

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11.

Ongoing evolution of strand composition in bacterial genomes.

Rocha EP, Danchin A.

Mol Biol Evol. 2001 Sep;18(9):1789-99.

PMID:
11504858
12.

Correlations between nucleotide frequencies and amino acid composition in 115 bacterial species.

Bharanidharan D, Bhargavi GR, Uthanumallian K, Gautham N.

Biochem Biophys Res Commun. 2004 Mar 19;315(4):1097-103.

PMID:
14985126
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15.

GC skew in protein-coding genes between the leading and lagging strands in bacterial genomes: new substitution models incorporating strand bias.

MarĂ­n A, Xia X.

J Theor Biol. 2008 Aug 7;253(3):508-13. doi: 10.1016/j.jtbi.2008.04.004. Epub 2008 Apr 11.

PMID:
18486155
16.

Strand compositional asymmetries of nuclear DNA in eukaryotes.

Niu DK, Lin K, Zhang DY.

J Mol Evol. 2003 Sep;57(3):325-34.

PMID:
14629042
17.

Strand-specific mutational bias influences codon usage of weakly expressed genes in Escherichia coli.

Powdel BR, Borah M, Ray SK.

Genes Cells. 2010 Jun;15(7):773-82. doi: 10.1111/j.1365-2443.2010.01417.x. Epub 2010 Jun 7.

18.

Preferential usage of some minor codons in bacteria.

Ohno H, Sakai H, Washio T, Tomita M.

Gene. 2001 Oct 3;276(1-2):107-15.

PMID:
11591477
20.

Compositional correlation studies among the three different codon positions in 12 bacterial genomes.

Majumdar S, Gupta SK, Sundararajan VS, Ghosh TC.

Biochem Biophys Res Commun. 1999 Dec 9;266(1):66-71.

PMID:
10581166

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