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Items: 1 to 20 of 118

1.

Computational method for reducing variance with Affymetrix microarrays.

Welle S, Brooks AI, Thornton CA.

BMC Bioinformatics. 2002 Aug 30;3:23.

2.

Reproducibility of gene expression across generations of Affymetrix microarrays.

Nimgaonkar A, Sanoudou D, Butte AJ, Haslett JN, Kunkel LM, Beggs AH, Kohane IS.

BMC Bioinformatics. 2003 Jun 25;4:27. Epub 2003 Jun 25.

3.

Sources of variability and effect of experimental approach on expression profiling data interpretation.

Bakay M, Chen YW, Borup R, Zhao P, Nagaraju K, Hoffman EP.

BMC Bioinformatics. 2002;3:4. Epub 2002 Jan 31.

4.

Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data.

Chen JJ, Hsueh HM, Delongchamp RR, Lin CJ, Tsai CA.

BMC Bioinformatics. 2007 Oct 25;8:412.

5.

Accuracy of cDNA microarray methods to detect small gene expression changes induced by neuregulin on breast epithelial cells.

Yao B, Rakhade SN, Li Q, Ahmed S, Krauss R, Draghici S, Loeb JA.

BMC Bioinformatics. 2004 Jul 23;5:99.

6.

The chemiluminescence based Ziplex automated workstation focus array reproduces ovarian cancer Affymetrix GeneChip expression profiles.

Quinn MC, Wilson DJ, Young F, Dempsey AA, Arcand SL, Birch AH, Wojnarowicz PM, Provencher D, Mes-Masson AM, Englert D, Tonin PN.

J Transl Med. 2009 Jul 6;7:55. doi: 10.1186/1479-5876-7-55.

7.

Differential gene expression in pubococcygeus muscle from patients with pelvic organ prolapse.

Visco AG, Yuan L.

Am J Obstet Gynecol. 2003 Jul;189(1):102-12.

PMID:
12861146
8.

Combining gene expression data from different generations of oligonucleotide arrays.

Hwang KB, Kong SW, Greenberg SA, Park PJ.

BMC Bioinformatics. 2004 Oct 25;5:159.

9.

Identifying significant temporal variation in time course microarray data without replicates.

Billups SC, Neville MC, Rudolph M, Porter W, Schedin P.

BMC Bioinformatics. 2009 Mar 26;10:96. doi: 10.1186/1471-2105-10-96.

10.

Exploration, normalization, and summaries of high density oligonucleotide array probe level data.

Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP.

Biostatistics. 2003 Apr;4(2):249-64.

PMID:
12925520
11.

Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays.

Wang Y, Barbacioru C, Hyland F, Xiao W, Hunkapiller KL, Blake J, Chan F, Gonzalez C, Zhang L, Samaha RR.

BMC Genomics. 2006 Mar 21;7:59.

13.
14.

Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays.

Seo J, Bakay M, Chen YW, Hilmer S, Shneiderman B, Hoffman EP.

Bioinformatics. 2004 Nov 1;20(16):2534-44. Epub 2004 Apr 29.

PMID:
15117752
15.

Gene expression profile of aging in human muscle.

Welle S, Brooks AI, Delehanty JM, Needler N, Thornton CA.

Physiol Genomics. 2003 Jul 7;14(2):149-59.

PMID:
12783983
16.

Visualising gene expression in its metabolic context.

Wolf D, Gray CP, de Saizieu A.

Brief Bioinform. 2000 Sep;1(3):297-304.

PMID:
11465040
17.
18.

Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model.

Sásik R, Calvo E, Corbeil J.

Bioinformatics. 2002 Dec;18(12):1633-40.

PMID:
12490448
19.

Sex genes for genomic analysis in human brain: internal controls for comparison of probe level data extraction.

Galfalvy HC, Erraji-Benchekroun L, Smyrniotopoulos P, Pavlidis P, Ellis SP, Mann JJ, Sibille E, Arango V.

BMC Bioinformatics. 2003 Sep 8;4:37. Epub 2003 Sep 8.

20.

Spotted long oligonucleotide arrays for human gene expression analysis.

Barczak A, Rodriguez MW, Hanspers K, Koth LL, Tai YC, Bolstad BM, Speed TP, Erle DJ.

Genome Res. 2003 Jul;13(7):1775-85. Epub 2003 Jun 12.

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