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Items: 1 to 20 of 130

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Theoretical and experimental comparisons of gene expression indexes for oligonucleotide arrays.

Lemon WJ, Palatini JJ, Krahe R, Wright FA.

Bioinformatics. 2002 Nov;18(11):1470-6.

PMID:
12424118
4.

Reproducibility of alternative probe synthesis approaches for gene expression profiling with arrays.

Vernon SD, Unger ER, Rajeevan M, Dimulescu IM, Nisenbaum R, Campbell CE.

J Mol Diagn. 2000 Aug;2(3):124-7.

5.

Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model.

Sásik R, Calvo E, Corbeil J.

Bioinformatics. 2002 Dec;18(12):1633-40.

PMID:
12490448
6.

Evaluation of methods for oligonucleotide array data via quantitative real-time PCR.

Qin LX, Beyer RP, Hudson FN, Linford NJ, Morris DE, Kerr KF.

BMC Bioinformatics. 2006 Jan 17;7:23.

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data.

Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP.

Biostatistics. 2003 Apr;4(2):249-64.

9.

Specificity assessment from fractionation experiments (SAFE): a novel method to evaluate microarray probe specificity based on hybridisation stringencies.

Drobyshev AL, Machka C, Horsch M, Seltmann M, Liebscher V, Hrabé de Angelis M, Beckers J.

Nucleic Acids Res. 2003 Jan 15;31(2):E1-1.

10.

A novel, high-performance random array platform for quantitative gene expression profiling.

Kuhn K, Baker SC, Chudin E, Lieu MH, Oeser S, Bennett H, Rigault P, Barker D, McDaniel TK, Chee MS.

Genome Res. 2004 Nov;14(11):2347-56.

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Expression profiling with oligonucleotide arrays: technologies and applications for neurobiology.

Sendera TJ, Dorris D, Ramakrishnan R, Nguyen A, Trakas D, Mazumder A.

Neurochem Res. 2002 Oct;27(10):1005-26.

PMID:
12462401
13.

Oligonucleotide microarray analysis of aminoallyl-labeled cDNA targets from linear RNA amplification.

Kaposi-Novak P, Lee JS, Mikaelyan A, Patel V, Thorgeirsson SS.

Biotechniques. 2004 Oct;37(4):580, 582-6, 588.

PMID:
15517970
14.

On-chip hybridization kinetics for optimization of gene expression experiments.

Khomyakova E, Livshits MA, Steinhauser MC, Dauphinot L, Cohen-Kaminsky S, Rossier J, Soussaline F, Potier MC.

Biotechniques. 2008 Jan;44(1):109-17.

15.

Nonspecific hybridization scaling of microarray expression estimates: a physicochemical approach for chip-to-chip normalization.

Binder H, Brücker J, Burden CJ.

J Phys Chem B. 2009 Mar 5;113(9):2874-95. doi: 10.1021/jp808118m.

PMID:
19708217
16.

Alternative mRNA polyadenylation can potentially affect detection of gene expression by affymetrix genechip arrays.

D'mello V, Lee JY, MacDonald CC, Tian B.

Appl Bioinformatics. 2006;5(4):249-53.

PMID:
17140271
17.

Cross-hybridization modeling on Affymetrix exon arrays.

Kapur K, Jiang H, Xing Y, Wong WH.

Bioinformatics. 2008 Dec 15;24(24):2887-93. doi: 10.1093/bioinformatics/btn571. Epub 2008 Nov 4.

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Statistical evaluation of differential expression on cDNA nylon arrays with replicated experiments.

Herwig R, Aanstad P, Clark M, Lehrach H.

Nucleic Acids Res. 2001 Dec 1;29(23):E117.

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