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Items: 1 to 20 of 2146

1.

Three-dimensional structural views of damaged-DNA recognition: T4 endonuclease V, E. coli Vsr protein, and human nucleotide excision repair factor XPA.

Morikawa K, Shirakawa M.

Mutat Res. 2000 Aug 30;460(3-4):257-75. Review. Erratum in: Mutat Res 2001 Apr 4;485(3):267-8.

PMID:
10946233
2.

Atomic model of a pyrimidine dimer excision repair enzyme complexed with a DNA substrate: structural basis for damaged DNA recognition.

Vassylyev DG, Kashiwagi T, Mikami Y, Ariyoshi M, Iwai S, Ohtsuka E, Morikawa K.

Cell. 1995 Dec 1;83(5):773-82.

3.

The nucleotide excision repair protein UvrB, a helicase-like enzyme with a catch.

Theis K, Skorvaga M, Machius M, Nakagawa N, Van Houten B, Kisker C.

Mutat Res. 2000 Aug 30;460(3-4):277-300. Review.

PMID:
10946234
4.

The role of base flipping in damage recognition and catalysis by T4 endonuclease V.

McCullough AK, Dodson ML, Schärer OD, Lloyd RS.

J Biol Chem. 1997 Oct 24;272(43):27210-7.

5.

Structure and activity of a thermostable thymine-DNA glycosylase: evidence for base twisting to remove mismatched normal DNA bases.

Mol CD, Arvai AS, Begley TJ, Cunningham RP, Tainer JA.

J Mol Biol. 2002 Jan 18;315(3):373-84.

PMID:
11786018
6.
7.

Crystal structure of a pyrimidine dimer-specific excision repair enzyme from bacteriophage T4: refinement at 1.45 A and X-ray analysis of the three active site mutants.

Morikawa K, Ariyoshi M, Vassylyev DG, Matsumoto O, Katayanagi K, Ohtsuka E.

J Mol Biol. 1995 Jun 2;249(2):360-75.

PMID:
7783199
9.
10.

Solution structure of the DNA- and RPA-binding domain of the human repair factor XPA.

Ikegami T, Kuraoka I, Saijo M, Kodo N, Kyogoku Y, Morikawa K, Tanaka K, Shirakawa M.

Nat Struct Biol. 1998 Aug;5(8):701-6.

PMID:
9699634
11.

RPA stabilizes the XPA-damaged DNA complex through protein-protein interaction.

Wang M, Mahrenholz A, Lee SH.

Biochemistry. 2000 May 30;39(21):6433-9.

PMID:
10828957
12.

X-ray structure of T4 endonuclease V: an excision repair enzyme specific for a pyrimidine dimer.

Morikawa K, Matsumoto O, Tsujimoto M, Katayanagi K, Ariyoshi M, Doi T, Ikehara M, Inaoka T, Ohtsuka E.

Science. 1992 Apr 24;256(5056):523-6.

PMID:
1575827
13.

Role of the basic amino acid cluster and Glu-23 in pyrimidine dimer glycosylase activity of T4 endonuclease V.

Doi T, Recktenwald A, Karaki Y, Kikuchi M, Morikawa K, Ikehara M, Inaoka T, Hori N, Ohtsuka E.

Proc Natl Acad Sci U S A. 1992 Oct 15;89(20):9420-4.

14.

Resonance assignments, solution structure, and backbone dynamics of the DNA- and RPA-binding domain of human repair factor XPA.

Ikegami T, Kuraoka I, Saijo M, Kodo N, Kyogoku Y, Morikawa K, Tanaka K, Shirakawa M.

J Biochem. 1999 Mar;125(3):495-506.

15.

Double-check probing of DNA bending and unwinding by XPA-RPA: an architectural function in DNA repair.

Missura M, Buterin T, Hindges R, Hübscher U, Kaspárková J, Brabec V, Naegeli H.

EMBO J. 2001 Jul 2;20(13):3554-64.

16.

Biochemical analysis of the damage recognition process in nucleotide excision repair.

You JS, Wang M, Lee SH.

J Biol Chem. 2003 Feb 28;278(9):7476-85. Epub 2002 Dec 13.

17.

Implications of the zinc-finger motif found in the DNA-binding domain of the human XPA protein.

Morita EH, Ohkubo T, Kuraoka I, Shirakawa M, Tanaka K, Morikawa K.

Genes Cells. 1996 May;1(5):437-42.

18.

Crystal structures of human DNA polymerase beta complexed with DNA: implications for catalytic mechanism, processivity, and fidelity.

Pelletier H, Sawaya MR, Wolfle W, Wilson SH, Kraut J.

Biochemistry. 1996 Oct 1;35(39):12742-61.

PMID:
8841118
20.

Nuclear magnetic resonance study of the interaction of T4 endonuclease V with DNA.

Lee BJ, Sakashita H, Ohkubo T, Ikehara M, Doi T, Morikawa K, Kyogoku Y, Osafune T, Iwai S, Ohtsuka E.

Biochemistry. 1994 Jan 11;33(1):57-64.

PMID:
8286363

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