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Items: 1 to 20 of 360

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The emergence of catalytic and structural diversity within the beta-clip fold.

Iyer LM, Aravind L.

Proteins. 2004 Jun 1;55(4):977-91.

PMID:
15146494
7.

Evolution of function in protein superfamilies, from a structural perspective.

Todd AE, Orengo CA, Thornton JM.

J Mol Biol. 2001 Apr 6;307(4):1113-43.

PMID:
11286560
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A novel ligand-binding domain involved in regulation of amino acid metabolism in prokaryotes.

Ettema TJ, Brinkman AB, Tani TH, Rafferty JB, Van Der Oost J.

J Biol Chem. 2002 Oct 4;277(40):37464-8. Epub 2002 Jul 23.

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Sequence and hydropathy profile analysis of two classes of secondary transporters.

Lolkema JS, Slotboom DJ.

Mol Membr Biol. 2005 May-Jun;22(3):177-89.

PMID:
16096261
12.

Efficient recognition of protein fold at low sequence identity by conservative application of Psi-BLAST: application.

Stevens FJ, Kuemmel C, Babnigg G, Collart FR.

J Mol Recognit. 2005 Mar-Apr;18(2):150-7.

PMID:
15593246
13.

Regulatory potential, phyletic distribution and evolution of ancient, intracellular small-molecule-binding domains.

Anantharaman V, Koonin EV, Aravind L.

J Mol Biol. 2001 Apr 13;307(5):1271-92.

PMID:
11292341
14.

Large-scale comparison of protein sequence alignment algorithms with structure alignments.

Sauder JM, Arthur JW, Dunbrack RL Jr.

Proteins. 2000 Jul 1;40(1):6-22.

PMID:
10813826
15.

Conservation of folding and stability within a protein family: the tyrosine corner as an evolutionary cul-de-sac.

Hamill SJ, Cota E, Chothia C, Clarke J.

J Mol Biol. 2000 Jan 21;295(3):641-9.

PMID:
10623553
16.

Structural classification of thioredoxin-like fold proteins.

Qi Y, Grishin NV.

Proteins. 2005 Feb 1;58(2):376-88.

PMID:
15558583
17.

The FxRxHrS motif: a conserved region essential for DNA binding of the VirR response regulator from Clostridium perfringens.

McGowan S, Lucet IS, Cheung JK, Awad MM, Whisstock JC, Rood JI.

J Mol Biol. 2002 Oct 4;322(5):997-1011.

PMID:
12367524
18.

A Web-based classification system of DNA-binding protein families.

Karmirantzou M, Hamodrakas SJ.

Protein Eng. 2001 Jul;14(7):465-72.

PMID:
11522919
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