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Items: 1 to 20 of 102

1.

Development and validation of whole genome-wide and genic microsatellite markers in oil palm (Elaeis guineensis Jacq.): First microsatellite database (OpSatdb).

B KB, K L MR, Sahu S, Mathur RK, P NK, G R, P A, H P B.

Sci Rep. 2019 Feb 13;9(1):1899. doi: 10.1038/s41598-018-37737-7.

2.

Development of novel EST-SSR markers in the macaúba palm (Acrocomia aculeata) using transcriptome sequencing and cross-species transferability in Arecaceae species.

Bazzo BR, de Carvalho LM, Carazzolle MF, Pereira GAG, Colombo CA.

BMC Plant Biol. 2018 Nov 12;18(1):276. doi: 10.1186/s12870-018-1509-9.

3.

SSR mining in oil palm EST database: application in oil palm germplasm diversity studies.

Ting NC, Zaki NM, Rosli R, Low ET, Ithnin M, Cheah SC, Tan SG, Singh R.

J Genet. 2010 Aug;89(2):135-45.

4.

Microsatellite-based high density linkage map in oil palm (Elaeis guineensis Jacq.).

Billotte N, Marseillac N, Risterucci AM, Adon B, Brottier P, Baurens FC, Singh R, Herrán A, Asmady H, Billot C, Amblard P, Durand-Gasselin T, Courtois B, Asmono D, Cheah SC, Rohde W, Ritter E, Charrier A.

Theor Appl Genet. 2005 Feb;110(4):754-65. Epub 2005 Jan 26.

PMID:
15723275
5.

Development and validation of genic-SSR markers in sesame by RNA-seq.

Zhang H, Wei L, Miao H, Zhang T, Wang C.

BMC Genomics. 2012 Jul 16;13:316. doi: 10.1186/1471-2164-13-316.

6.

Development, characterisation, and across-taxa utility of oil palm (Elaeis guineensis Jacq.) microsatellite markers.

Billotte N, Risterucci AM, Barcelos E, Noyer JL, Amblard P, Baurens FC.

Genome. 2001 Jun;44(3):413-25.

PMID:
11444700
7.

Exploiting transcriptome data for the development and characterization of gene-based SSR markers related to cold tolerance in oil palm (Elaeis guineensis).

Xiao Y, Zhou L, Xia W, Mason AS, Yang Y, Ma Z, Peng M.

BMC Plant Biol. 2014 Dec 19;14:384. doi: 10.1186/s12870-014-0384-2.

8.

Identification and characterization of gene-based SSR markers in date palm (Phoenix dactylifera L.).

Zhao Y, Williams R, Prakash CS, He G.

BMC Plant Biol. 2012 Dec 15;12:237. doi: 10.1186/1471-2229-12-237.

9.

SSR markers in transcripts of genes linked to post-transcriptional and transcriptional regulatory functions during vegetative and reproductive development of Elaeis guineensis.

Tranbarger TJ, Kluabmongkol W, Sangsrakru D, Morcillo F, Tregear JW, Tragoonrung S, Billotte N.

BMC Plant Biol. 2012 Jan 3;12:1. doi: 10.1186/1471-2229-12-1.

10.

Development and mapping of simple sequence repeat markers for pearl millet from data mining of expressed sequence tags.

Senthilvel S, Jayashree B, Mahalakshmi V, Kumar PS, Nakka S, Nepolean T, Hash C.

BMC Plant Biol. 2008 Nov 27;8:119. doi: 10.1186/1471-2229-8-119.

11.

Development, identification and validation of CAPS marker for SHELL trait which governs dura, pisifera and tenera fruit forms in oil palm (Elaeis guineensis Jacq.).

Babu BK, Mathur RK, Kumar PN, Ramajayam D, Ravichandran G, Venu MV, Babu SS.

PLoS One. 2017 Feb 13;12(2):e0171933. doi: 10.1371/journal.pone.0171933. eCollection 2017.

12.

Utility of EST-derived SSR in cultivated peanut (Arachis hypogaea L.) and Arachis wild species.

Liang X, Chen X, Hong Y, Liu H, Zhou G, Li S, Guo B.

BMC Plant Biol. 2009 Mar 24;9:35. doi: 10.1186/1471-2229-9-35.

13.

Genetic architecture of palm oil fatty acid composition in cultivated oil palm (Elaeis guineensis Jacq.) compared to its wild relative E. oleifera (H.B.K) Cortés.

Montoya C, Cochard B, Flori A, Cros D, Lopes R, Cuellar T, Espeout S, Syaputra I, Villeneuve P, Pina M, Ritter E, Leroy T, Billotte N.

PLoS One. 2014 May 9;9(5):e95412. doi: 10.1371/journal.pone.0095412. eCollection 2014. Erratum in: PLoS One. 2014;9(6):e101628.

15.

A second generation framework for the analysis of microsatellites in expressed sequence tags and the development of EST-SSR markers for a conifer, Cryptomeria japonica.

Ueno S, Moriguchi Y, Uchiyama K, Ujino-Ihara T, Futamura N, Sakurai T, Shinohara K, Tsumura Y.

BMC Genomics. 2012 Apr 16;13:136. doi: 10.1186/1471-2164-13-136.

16.

Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.).

Thiel T, Michalek W, Varshney RK, Graner A.

Theor Appl Genet. 2003 Feb;106(3):411-22. Epub 2002 Sep 14.

PMID:
12589540
17.

Genic and Intergenic SSR Database Generation, SNPs Determination and Pathway Annotations, in Date Palm (Phoenix dactylifera L.).

Mokhtar MM, Adawy SS, El-Assal Sel-D, Hussein EH.

PLoS One. 2016 Jul 19;11(7):e0159268. doi: 10.1371/journal.pone.0159268. eCollection 2016.

18.

A Genome-Wide Survey of the Microsatellite Content of the Globe Artichoke Genome and the Development of a Web-Based Database.

Portis E, Portis F, Valente L, Moglia A, Barchi L, Lanteri S, Acquadro A.

PLoS One. 2016 Sep 20;11(9):e0162841. doi: 10.1371/journal.pone.0162841. eCollection 2016.

19.

Elaeis oleifera genomic-SSR markers: exploitation in oil palm germplasm diversity and cross-amplification in arecaceae.

Zaki NM, Singh R, Rosli R, Ismail I.

Int J Mol Sci. 2012;13(4):4069-88. doi: 10.3390/ijms13044069. Epub 2012 Mar 28.

20.

Exploiting rice-sorghum synteny for targeted development of EST-SSRs to enrich the sorghum genetic linkage map.

Ramu P, Kassahun B, Senthilvel S, Ashok Kumar C, Jayashree B, Folkertsma RT, Reddy LA, Kuruvinashetti MS, Haussmann BI, Hash CT.

Theor Appl Genet. 2009 Nov;119(7):1193-204. doi: 10.1007/s00122-009-1120-4. Epub 2009 Aug 8.

PMID:
19669123

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