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Items: 1 to 20 of 106

1.

Exploring the Limits and Causes of Plastid Genome Expansion in Volvocine Green Algae.

Gaouda H, Hamaji T, Yamamoto K, Kawai-Toyooka H, Suzuki M, Noguchi H, Minakuchi Y, Toyoda A, Fujiyama A, Nozaki H, Smith DR.

Genome Biol Evol. 2018 Sep 1;10(9):2248-2254. doi: 10.1093/gbe/evy175.

2.

The mitochondrial and plastid genomes of Volvox carteri: bloated molecules rich in repetitive DNA.

Smith DR, Lee RW.

BMC Genomics. 2009 Mar 26;10:132. doi: 10.1186/1471-2164-10-132.

3.

Mitochondrial and plastid genomes of the colonial green alga Gonium pectorale give insights into the origins of organelle DNA architecture within the volvocales.

Hamaji T, Smith DR, Noguchi H, Toyoda A, Suzuki M, Kawai-Toyooka H, Fujiyama A, Nishii I, Marriage T, Olson BJ, Nozaki H.

PLoS One. 2013;8(2):e57177. doi: 10.1371/journal.pone.0057177. Epub 2013 Feb 26.

4.

The Dunaliella salina organelle genomes: large sequences, inflated with intronic and intergenic DNA.

Smith DR, Lee RW, Cushman JC, Magnuson JK, Tran D, Polle JE.

BMC Plant Biol. 2010 May 7;10:83. doi: 10.1186/1471-2229-10-83.

5.

Low nucleotide diversity for the expanded organelle and nuclear genomes of Volvox carteri supports the mutational-hazard hypothesis.

Smith DR, Lee RW.

Mol Biol Evol. 2010 Oct;27(10):2244-56. doi: 10.1093/molbev/msq110. Epub 2010 Apr 29.

PMID:
20430860
6.

Organelle genome complexity scales positively with organism size in volvocine green algae.

Smith DR, Hamaji T, Olson BJ, Durand PM, Ferris P, Michod RE, Featherston J, Nozaki H, Keeling PJ.

Mol Biol Evol. 2013 Apr;30(4):793-7. doi: 10.1093/molbev/mst002. Epub 2013 Jan 7.

7.

Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri.

Prochnik SE, Umen J, Nedelcu AM, Hallmann A, Miller SM, Nishii I, Ferris P, Kuo A, Mitros T, Fritz-Laylin LK, Hellsten U, Chapman J, Simakov O, Rensing SA, Terry A, Pangilinan J, Kapitonov V, Jurka J, Salamov A, Shapiro H, Schmutz J, Grimwood J, Lindquist E, Lucas S, Grigoriev IV, Schmitt R, Kirk D, Rokhsar DS.

Science. 2010 Jul 9;329(5988):223-6. doi: 10.1126/science.1188800.

8.
9.

Evolution of cytokinesis-related protein localization during the emergence of multicellularity in volvocine green algae.

Arakaki Y, Fujiwara T, Kawai-Toyooka H, Kawafune K, Featherston J, Durand PM, Miyagishima SY, Nozaki H.

BMC Evol Biol. 2017 Dec 6;17(1):243. doi: 10.1186/s12862-017-1091-z.

10.

The Plastid Genome of Polytoma uvella Is the Largest Known among Colorless Algae and Plants and Reflects Contrasting Evolutionary Paths to Nonphotosynthetic Lifestyles.

Figueroa-Martinez F, Nedelcu AM, Smith DR, Reyes-Prieto A.

Plant Physiol. 2017 Feb;173(2):932-943. doi: 10.1104/pp.16.01628. Epub 2016 Dec 8.

11.

Haematococcus lacustris: the makings of a giant-sized chloroplast genome.

Smith DR.

AoB Plants. 2018 Oct 1;10(5):ply058. doi: 10.1093/aobpla/ply058. eCollection 2018 Oct. Review.

12.

Molecular phylogeny of the volvocine flagellates.

Larson A, Kirk MM, Kirk DL.

Mol Biol Evol. 1992 Jan;9(1):85-105.

PMID:
1552843
13.

Whole transcriptome RNA-Seq analysis reveals extensive cell type-specific compartmentalization in Volvox carteri.

Klein B, Wibberg D, Hallmann A.

BMC Biol. 2017 Nov 28;15(1):111. doi: 10.1186/s12915-017-0450-y.

14.

Delineating a New Heterothallic Species of Volvox (Volvocaceae, Chlorophyceae) Using New Strains of "Volvox africanus".

Nozaki H, Matsuzaki R, Yamamoto K, Kawachi M, Takahashi F.

PLoS One. 2015 Nov 12;10(11):e0142632. doi: 10.1371/journal.pone.0142632. eCollection 2015.

15.

Sequence of the Gonium pectorale Mating Locus Reveals a Complex and Dynamic History of Changes in Volvocine Algal Mating Haplotypes.

Hamaji T, Mogi Y, Ferris PJ, Mori T, Miyagishima S, Kabeya Y, Nishimura Y, Toyoda A, Noguchi H, Fujiyama A, Olson BJ, Marriage TN, Nishii I, Umen JG, Nozaki H.

G3 (Bethesda). 2016 May 3;6(5):1179-89. doi: 10.1534/g3.115.026229.

16.

The New Red Algal Subphylum Proteorhodophytina Comprises the Largest and Most Divergent Plastid Genomes Known.

Muñoz-Gómez SA, Mejía-Franco FG, Durnin K, Colp M, Grisdale CJ, Archibald JM, Slamovits CH.

Curr Biol. 2017 Jun 5;27(11):1677-1684.e4. doi: 10.1016/j.cub.2017.04.054. Epub 2017 May 18.

17.

Plastid Genome of Dictyopteris divaricata (Dictyotales, Phaeophyceae): Understanding the Evolution of Plastid Genomes in Brown Algae.

Liu F, Jin Z, Wang Y, Bi Y, Melton JT 3rd.

Mar Biotechnol (NY). 2017 Dec;19(6):627-637. doi: 10.1007/s10126-017-9781-5. Epub 2017 Nov 21.

PMID:
29164355
18.

Stable nuclear transformation of Gonium pectorale.

Lerche K, Hallmann A.

BMC Biotechnol. 2009 Jul 10;9:64. doi: 10.1186/1472-6750-9-64.

19.

Co-option during the evolution of multicellular and developmental complexity in the volvocine green algae.

Olson BJ, Nedelcu AM.

Curr Opin Genet Dev. 2016 Aug;39:107-115. doi: 10.1016/j.gde.2016.06.003. Epub 2016 Jul 2. Review.

PMID:
27379901
20.

Evolution of reproductive development in the volvocine algae.

Hallmann A.

Sex Plant Reprod. 2011 Jun;24(2):97-112. doi: 10.1007/s00497-010-0158-4. Epub 2010 Dec 21. Review.

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