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Items: 1 to 20 of 97

1.

Inference of cell type content from human brain transcriptomic datasets illuminates the effects of age, manner of death, dissection, and psychiatric diagnosis.

Hagenauer MH, Schulmann A, Li JZ, Vawter MP, Walsh DM, Thompson RC, Turner CA, Bunney WE, Myers RM, Barchas JD, Schatzberg AF, Watson SJ, Akil H.

PLoS One. 2018 Jul 17;13(7):e0200003. doi: 10.1371/journal.pone.0200003. eCollection 2018.

2.

Effect of RNA quality on transcript intensity levels in microarray analysis of human post-mortem brain tissues.

Popova T, Mennerich D, Weith A, Quast K.

BMC Genomics. 2008 Feb 25;9:91. doi: 10.1186/1471-2164-9-91.

3.

Pattern of gene expression in different stages of schizophrenia: Down-regulation of NPTX2 gene revealed by a meta-analysis of microarray datasets.

Manchia M, Piras IS, Huentelman MJ, Pinna F, Zai CC, Kennedy JL, Carpiniello B.

Eur Neuropsychopharmacol. 2017 Oct;27(10):1054-1063. doi: 10.1016/j.euroneuro.2017.07.002. Epub 2017 Jul 18.

PMID:
28732597
5.

Methodological considerations for gene expression profiling of human brain.

Atz M, Walsh D, Cartagena P, Li J, Evans S, Choudary P, Overman K, Stein R, Tomita H, Potkin S, Myers R, Watson SJ, Jones EG, Akil H, Bunney WE Jr, Vawter MP; Members of National Institute of Mental Health Conte Center and Pritzker Neuropsychiatric Disorders Research Consortium.

J Neurosci Methods. 2007 Jul 30;163(2):295-309. Epub 2007 Apr 8.

6.

Correlation analysis between genome-wide expression profiles and cytoarchitectural abnormalities in the prefrontal cortex of psychiatric disorders.

Kim S, Webster MJ.

Mol Psychiatry. 2010 Mar;15(3):326-36. doi: 10.1038/mp.2008.99. Epub 2008 Sep 2.

PMID:
18762803
7.

RT-qPCR study on post-mortem brain samples from patients with major psychiatric disorders: reference genes and specimen characteristics.

Abasolo N, Torrell H, Roig B, Moyano S, Vilella E, Martorell L.

J Psychiatr Res. 2011 Nov;45(11):1411-8. doi: 10.1016/j.jpsychires.2011.06.001. Epub 2011 Jun 24.

PMID:
21704324
8.

Gene expression profiling of post-mortem orbitofrontal cortex in violent suicide victims.

Thalmeier A, Dickmann M, Giegling I, Schneider B, M Hartmann A, Maurer K, Schnabel A, Kauert G, Möller HJ, Rujescu D.

Int J Neuropsychopharmacol. 2008 Mar;11(2):217-28. Epub 2007 Jul 3.

PMID:
17608962
9.

Identification of the BRD1 interaction network and its impact on mental disorder risk.

Fryland T, Christensen JH, Pallesen J, Mattheisen M, Palmfeldt J, Bak M, Grove J, Demontis D, Blechingberg J, Ooi HS, Nyegaard M, Hauberg ME, Tommerup N, Gregersen N, Mors O, Corydon TJ, Nielsen AL, Børglum AD.

Genome Med. 2016 May 3;8(1):53. doi: 10.1186/s13073-016-0308-x.

10.

Isolation of primary microglia from the human post-mortem brain: effects of ante- and post-mortem variables.

Mizee MR, Miedema SS, van der Poel M, Adelia, Schuurman KG, van Strien ME, Melief J, Smolders J, Hendrickx DA, Heutinck KM, Hamann J, Huitinga I.

Acta Neuropathol Commun. 2017 Feb 17;5(1):16. doi: 10.1186/s40478-017-0418-8.

11.

Whole-transcriptome brain expression and exon-usage profiling in major depression and suicide: evidence for altered glial, endothelial and ATPase activity.

Pantazatos SP, Huang YY, Rosoklija GB, Dwork AJ, Arango V, Mann JJ.

Mol Psychiatry. 2017 May;22(5):760-773. doi: 10.1038/mp.2016.130. Epub 2016 Aug 16.

12.

Pathological 43-kDa transactivation response DNA-binding protein in older adults with and without severe mental illness.

Geser F, Robinson JL, Malunda JA, Xie SX, Clark CM, Kwong LK, Moberg PJ, Moore EM, Van Deerlin VM, Lee VM, Arnold SE, Trojanowski JQ.

Arch Neurol. 2010 Oct;67(10):1238-50. doi: 10.1001/archneurol.2010.254.

13.

The cerebral microvasculature in schizophrenia: a laser capture microdissection study.

Harris LW, Wayland M, Lan M, Ryan M, Giger T, Lockstone H, Wuethrich I, Mimmack M, Wang L, Kotter M, Craddock R, Bahn S.

PLoS One. 2008;3(12):e3964. doi: 10.1371/journal.pone.0003964. Epub 2008 Dec 17.

14.

Quality control parameters on a large dataset of regionally dissected human control brains for whole genome expression studies.

Trabzuni D, Ryten M, Walker R, Smith C, Imran S, Ramasamy A, Weale ME, Hardy J.

J Neurochem. 2011 Oct;119(2):275-82. doi: 10.1111/j.1471-4159.2011.07432.x. Epub 2011 Sep 20.

15.

Effects of mental illness and aging in two thalamic nuclei.

Byne W, Tatusov A, Yiannoulos G, Vong GS, Marcus S.

Schizophr Res. 2008 Dec;106(2-3):172-81. doi: 10.1016/j.schres.2008.08.023. Epub 2008 Oct 2.

16.

Analyzing schizophrenia by DNA microarrays.

Horváth S, Janka Z, Mirnics K.

Biol Psychiatry. 2011 Jan 15;69(2):157-62. doi: 10.1016/j.biopsych.2010.07.017. Review.

17.

Circadian patterns of gene expression in the human brain and disruption in major depressive disorder.

Li JZ, Bunney BG, Meng F, Hagenauer MH, Walsh DM, Vawter MP, Evans SJ, Choudary PV, Cartagena P, Barchas JD, Schatzberg AF, Jones EG, Myers RM, Watson SJ Jr, Akil H, Bunney WE.

Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):9950-5. doi: 10.1073/pnas.1305814110. Epub 2013 May 13.

18.

Development of a versatile enrichment analysis tool reveals associations between the maternal brain and mental health disorders, including autism.

Eisinger BE, Saul MC, Driessen TM, Gammie SC.

BMC Neurosci. 2013 Nov 19;14:147. doi: 10.1186/1471-2202-14-147.

19.

BABAR: an R package to simplify the normalisation of common reference design microarray-based transcriptomic datasets.

Alston MJ, Seers J, Hinton JC, Lucchini S.

BMC Bioinformatics. 2010 Feb 3;11:73. doi: 10.1186/1471-2105-11-73.

20.

Transcriptomic analysis of postmortem brain identifies dysregulated splicing events in novel candidate genes for schizophrenia.

Cohen OS, Mccoy SY, Middleton FA, Bialosuknia S, Zhang-James Y, Liu L, Tsuang MT, Faraone SV, Glatt SJ.

Schizophr Res. 2012 Dec;142(1-3):188-99. doi: 10.1016/j.schres.2012.09.015. Epub 2012 Oct 9.

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