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Items: 1 to 20 of 101

1.

Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus.

Quinodoz SA, Ollikainen N, Tabak B, Palla A, Schmidt JM, Detmar E, Lai MM, Shishkin AA, Bhat P, Takei Y, Trinh V, Aznauryan E, Russell P, Cheng C, Jovanovic M, Chow A, Cai L, McDonel P, Garber M, Guttman M.

Cell. 2018 Jul 26;174(3):744-757.e24. doi: 10.1016/j.cell.2018.05.024. Epub 2018 Jun 7.

PMID:
29887377
2.

Three-dimensional genome organization in interphase and its relation to genome function.

Goetze S, Mateos-Langerak J, van Driel R.

Semin Cell Dev Biol. 2007 Oct;18(5):707-14. Epub 2007 Aug 25. Review.

PMID:
17905616
3.

[Compartmentalization of the cell nucleus and spatial organization of the genome].

Gavrilov AA, Razin SV.

Mol Biol (Mosk). 2015 Jan-Feb;49(1):26-45. Review. Russian.

4.

A three-dimensional model of the yeast genome.

Duan Z, Andronescu M, Schutz K, McIlwain S, Kim YJ, Lee C, Shendure J, Fields S, Blau CA, Noble WS.

Nature. 2010 May 20;465(7296):363-7. doi: 10.1038/nature08973. Epub 2010 May 2.

5.

Organization of the genome and gene expression in a nuclear environment lacking histones and nucleosomes: the amazing dinoflagellates.

Moreno Díaz de la Espina S, Alverca E, Cuadrado A, Franca S.

Eur J Cell Biol. 2005 Mar;84(2-3):137-49. Review.

PMID:
15819396
6.

An interphase model for mitotic chromosome organization in eukaryota.

Lavania UC, Sharma AK.

Biosystems. 1981;14(2):171-8.

PMID:
7295909
7.

The dynamics of chromosome organization and gene regulation.

Spector DL.

Annu Rev Biochem. 2003;72:573-608. Review.

PMID:
14527325
8.
9.

Physical tethering and volume exclusion determine higher-order genome organization in budding yeast.

Tjong H, Gong K, Chen L, Alber F.

Genome Res. 2012 Jul;22(7):1295-305. doi: 10.1101/gr.129437.111. Epub 2012 May 22.

10.

Nuclear neighbours: the spatial and functional organization of genes and nuclear domains.

Schul W, de Jong L, van Driel R.

J Cell Biochem. 1998 Aug 1;70(2):159-71. Review.

PMID:
9671222
11.

The three-dimensional genome organization of Drosophila melanogaster through data integration.

Li Q, Tjong H, Li X, Gong K, Zhou XJ, Chiolo I, Alber F.

Genome Biol. 2017 Jul 31;18(1):145. doi: 10.1186/s13059-017-1264-5.

12.

Chromatin organization in the mammalian nucleus.

Gilbert N, Gilchrist S, Bickmore WA.

Int Rev Cytol. 2005;242:283-336. Review.

PMID:
15598472
13.

5C-ID: Increased resolution Chromosome-Conformation-Capture-Carbon-Copy with in situ 3C and double alternating primer design.

Kim JH, Titus KR, Gong W, Beagan JA, Cao Z, Phillips-Cremins JE.

Methods. 2018 Jun 1;142:39-46. doi: 10.1016/j.ymeth.2018.05.005. Epub 2018 May 24.

PMID:
29772275
14.

A predictive computational model of the dynamic 3D interphase yeast nucleus.

Wong H, Marie-Nelly H, Herbert S, Carrivain P, Blanc H, Koszul R, Fabre E, Zimmer C.

Curr Biol. 2012 Oct 23;22(20):1881-90. doi: 10.1016/j.cub.2012.07.069. Epub 2012 Aug 30.

15.

The nucleolus: a raft adrift in the nuclear sea or the keystone in nuclear structure?

O'Sullivan JM, Pai DA, Cridge AG, Engelke DR, Ganley AR.

Biomol Concepts. 2013 Jun;4(3):277-86. doi: 10.1515/bmc-2012-0043. Review.

16.

Dynamics of the mammalian nucleus: can microscopic movements help us to understand our genes?

Sleeman JE.

Philos Trans A Math Phys Eng Sci. 2004 Dec 15;362(1825):2775-93. Review.

PMID:
15539370
18.

tRNA gene identity affects nuclear positioning.

Rodley CD, Pai DA, Mills TA, Engelke DR, O'Sullivan JM.

PLoS One. 2011;6(12):e29267. doi: 10.1371/journal.pone.0029267. Epub 2011 Dec 19.

19.

Structural-Functional Domains of the Eukaryotic Genome.

Razin SV, Gavrilov AA.

Biochemistry (Mosc). 2018 Apr;83(4):302-312. doi: 10.1134/S0006297918040028. Review.

20.

Gene gating: a hypothesis.

Blobel G.

Proc Natl Acad Sci U S A. 1985 Dec;82(24):8527-9.

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