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Items: 1 to 20 of 133

1.

Expression atlas and comparative coexpression network analyses reveal important genes involved in the formation of lignified cell wall in Brachypodium distachyon.

Sibout R, Proost S, Hansen BO, Vaid N, Giorgi FM, Ho-Yue-Kuang S, Legée F, Cézart L, Bouchabké-Coussa O, Soulhat C, Provart N, Pasha A, Le Bris P, Roujol D, Hofte H, Jamet E, Lapierre C, Persson S, Mutwil M.

New Phytol. 2017 Aug;215(3):1009-1025. doi: 10.1111/nph.14635. Epub 2017 Jun 15.

2.

Functional testing of a PF02458 homologue of putative rice arabinoxylan feruloyl transferase genes in Brachypodium distachyon.

Buanafina MM, Fescemyer HW, Sharma M, Shearer EA.

Planta. 2016 Mar;243(3):659-74. doi: 10.1007/s00425-015-2430-1. Epub 2015 Nov 26.

PMID:
26612070
3.

Functional characterization of cinnamyl alcohol dehydrogenase and caffeic acid O-methyltransferase in Brachypodium distachyon.

Trabucco GM, Matos DA, Lee SJ, Saathoff AJ, Priest HD, Mockler TC, Sarath G, Hazen SP.

BMC Biotechnol. 2013 Jul 31;13:61. doi: 10.1186/1472-6750-13-61.

4.

Genome-wide identification, phylogeny and expression analysis of AP2/ERF transcription factors family in Brachypodium distachyon.

Cui L, Feng K, Wang M, Wang M, Deng P, Song W, Nie X.

BMC Genomics. 2016 Aug 15;17(1):636. doi: 10.1186/s12864-016-2968-8.

5.

Genome-wide identification and analysis of MAPK and MAPKK gene families in Brachypodium distachyon.

Chen L, Hu W, Tan S, Wang M, Ma Z, Zhou S, Deng X, Zhang Y, Huang C, Yang G, He G.

PLoS One. 2012;7(10):e46744. doi: 10.1371/journal.pone.0046744. Epub 2012 Oct 17.

6.

Disrupting the cinnamyl alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon.

Bouvier d'Yvoire M, Bouchabke-Coussa O, Voorend W, Antelme S, Cézard L, Legée F, Lebris P, Legay S, Whitehead C, McQueen-Mason SJ, Gomez LD, Jouanin L, Lapierre C, Sibout R.

Plant J. 2013 Feb;73(3):496-508. doi: 10.1111/tpj.12053. Epub 2012 Dec 10.

7.
8.

Identification of lignin-deficient Brachypodium distachyon (L.) Beauv. mutants induced by gamma radiation.

Lee MB, Kim JY, Seo YW.

J Sci Food Agric. 2017 May;97(7):2159-2165. doi: 10.1002/jsfa.8024. Epub 2016 Oct 5.

PMID:
27604502
9.

Genome-wide analysis of the MADS-box gene family in Brachypodium distachyon.

Wei B, Zhang RZ, Guo JJ, Liu DM, Li AL, Fan RC, Mao L, Zhang XQ.

PLoS One. 2014 Jan 13;9(1):e84781. doi: 10.1371/journal.pone.0084781. eCollection 2014.

10.

LACCASE5 is required for lignification of the Brachypodium distachyon Culm.

Wang Y, Bouchabke-Coussa O, Lebris P, Antelme S, Soulhat C, Gineau E, Dalmais M, Bendahmane A, Morin H, Mouille G, Legée F, Cézard L, Lapierre C, Sibout R.

Plant Physiol. 2015 May;168(1):192-204. doi: 10.1104/pp.114.255489. Epub 2015 Mar 9.

11.

Annotation and comparative analysis of the glycoside hydrolase genes in Brachypodium distachyon.

Tyler L, Bragg JN, Wu J, Yang X, Tuskan GA, Vogel JP.

BMC Genomics. 2010 Oct 25;11:600. doi: 10.1186/1471-2164-11-600.

12.

Range of cell-wall alterations enhance saccharification in Brachypodium distachyon mutants.

Marriott PE, Sibout R, Lapierre C, Fangel JU, Willats WG, Hofte H, Gómez LD, McQueen-Mason SJ.

Proc Natl Acad Sci U S A. 2014 Oct 7;111(40):14601-6. doi: 10.1073/pnas.1414020111. Epub 2014 Sep 22.

14.

Brachypodium distachyon as a model plant toward improved biofuel crops: Search for secreted proteins involved in biogenesis and disassembly of cell wall polymers.

Douché T, San Clemente H, Burlat V, Roujol D, Valot B, Zivy M, Pont-Lezica R, Jamet E.

Proteomics. 2013 Aug;13(16):2438-54. doi: 10.1002/pmic.201200507. Epub 2013 Jul 23.

PMID:
23784962
15.

Protocol for Coexpression Network Construction and Stress-Responsive Expression Analysis in Brachypodium.

Sircar S, Parekh N, Sablok G.

Methods Mol Biol. 2018;1667:203-221. doi: 10.1007/978-1-4939-7278-4_16.

PMID:
29039014
16.

Effects of PHENYLALANINE AMMONIA LYASE (PAL) knockdown on cell wall composition, biomass digestibility, and biotic and abiotic stress responses in Brachypodium.

Cass CL, Peraldi A, Dowd PF, Mottiar Y, Santoro N, Karlen SD, Bukhman YV, Foster CE, Thrower N, Bruno LC, Moskvin OV, Johnson ET, Willhoit ME, Phutane M, Ralph J, Mansfield SD, Nicholson P, Sedbrook JC.

J Exp Bot. 2015 Jul;66(14):4317-35. doi: 10.1093/jxb/erv269. Epub 2015 Jun 19.

17.

Structural Redesigning Arabidopsis Lignins into Alkali-Soluble Lignins through the Expression of p-Coumaroyl-CoA:Monolignol Transferase PMT.

Sibout R, Le Bris P, Legée F, Cézard L, Renault H, Lapierre C.

Plant Physiol. 2016 Mar;170(3):1358-66. doi: 10.1104/pp.15.01877. Epub 2016 Jan 29.

18.
19.

Regulation of secondary wall synthesis and cell death by NAC transcription factors in the monocot Brachypodium distachyon.

Valdivia ER, Herrera MT, Gianzo C, Fidalgo J, Revilla G, Zarra I, Sampedro J.

J Exp Bot. 2013 Mar;64(5):1333-43. doi: 10.1093/jxb/ers394. Epub 2013 Feb 5.

20.

Transcriptome analysis of hormone-induced gene expression in Brachypodium distachyon.

Kakei Y, Mochida K, Sakurai T, Yoshida T, Shinozaki K, Shimada Y.

Sci Rep. 2015 Sep 30;5:14476. doi: 10.1038/srep14476.

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