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Items: 1 to 20 of 202

1.

Mitochondrial Mutation Rate, Spectrum and Heteroplasmy in Caenorhabditis elegans Spontaneous Mutation Accumulation Lines of Differing Population Size.

Konrad A, Thompson O, Waterston RH, Moerman DG, Keightley PD, Bergthorsson U, Katju V.

Mol Biol Evol. 2017 Jun 1;34(6):1319-1334. doi: 10.1093/molbev/msx051. Erratum in: Mol Biol Evol. 2017 Mar 1;34(3):778.

2.

Fitness decline in spontaneous mutation accumulation lines of Caenorhabditis elegans with varying effective population sizes.

Katju V, Packard LB, Bu L, Keightley PD, Bergthorsson U.

Evolution. 2015 Jan;69(1):104-16. doi: 10.1111/evo.12554. Epub 2014 Dec 9.

PMID:
25338758
3.

Paths of Heritable Mitochondrial DNA Mutation and Heteroplasmy in Reference and gas-1 Strains of Caenorhabditis elegans.

Wernick RI, Estes S, Howe DK, Denver DR.

Front Genet. 2016 Apr 13;7:51. doi: 10.3389/fgene.2016.00051. eCollection 2016.

4.

Muller's Ratchet and compensatory mutation in Caenorhabditis briggsae mitochondrial genome evolution.

Howe DK, Denver DR.

BMC Evol Biol. 2008 Feb 26;8:62. doi: 10.1186/1471-2148-8-62.

5.

Adaptive Evolution under Extreme Genetic Drift in Oxidatively Stressed Caenorhabditis elegans.

Christy SF, Wernick RI, Lue MJ, Velasco G, Howe DK, Denver DR, Estes S.

Genome Biol Evol. 2017 Nov 1;9(11):3008-3022. doi: 10.1093/gbe/evx222.

6.

High direct estimate of the mutation rate in the mitochondrial genome of Caenorhabditis elegans.

Denver DR, Morris K, Lynch M, Vassilieva LL, Thomas WK.

Science. 2000 Sep 29;289(5488):2342-4.

7.

Parkin modulates heteroplasmy of truncated mtDNA in Caenorhabditis elegans.

Valenci I, Yonai L, Bar-Yaacov D, Mishmar D, Ben-Zvi A.

Mitochondrion. 2015 Jan;20:64-70. doi: 10.1016/j.mito.2014.11.001. Epub 2014 Nov 15.

PMID:
25462019
8.

Detecting heteroplasmy from high-throughput sequencing of complete human mitochondrial DNA genomes.

Li M, Schönberg A, Schaefer M, Schroeder R, Nasidze I, Stoneking M.

Am J Hum Genet. 2010 Aug 13;87(2):237-49. doi: 10.1016/j.ajhg.2010.07.014.

9.

Direct estimation of the mitochondrial DNA mutation rate in Drosophila melanogaster.

Haag-Liautard C, Coffey N, Houle D, Lynch M, Charlesworth B, Keightley PD.

PLoS Biol. 2008 Aug 19;6(8):e204. doi: 10.1371/journal.pbio.0060204.

10.

Selective sweeps and parallel mutation in the adaptive recovery from deleterious mutation in Caenorhabditis elegans.

Denver DR, Howe DK, Wilhelm LJ, Palmer CA, Anderson JL, Stein KC, Phillips PC, Estes S.

Genome Res. 2010 Dec;20(12):1663-71. doi: 10.1101/gr.108191.110. Epub 2010 Oct 29.

11.

High mutation rates in the mitochondrial genomes of Daphnia pulex.

Xu S, Schaack S, Seyfert A, Choi E, Lynch M, Cristescu ME.

Mol Biol Evol. 2012 Feb;29(2):763-9. doi: 10.1093/molbev/msr243. Epub 2011 Oct 13.

12.
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14.

Selfish little circles: transmission bias and evolution of large deletion-bearing mitochondrial DNA in Caenorhabditis briggsae nematodes.

Clark KA, Howe DK, Gafner K, Kusuma D, Ping S, Estes S, Denver DR.

PLoS One. 2012;7(7):e41433. doi: 10.1371/journal.pone.0041433. Epub 2012 Jul 31.

15.

Sex and Mitonuclear Adaptation in Experimental Caenorhabditis elegans Populations.

Wernick RI, Christy SF, Howe DK, Sullins JA, Ramirez JF, Sare M, Penley MJ, Morran LT, Denver DR, Estes S.

Genetics. 2019 Mar;211(3):1045-1058. doi: 10.1534/genetics.119.301935. Epub 2019 Jan 22.

PMID:
30670540
16.

A genome-wide view of Caenorhabditis elegans base-substitution mutation processes.

Denver DR, Dolan PC, Wilhelm LJ, Sung W, Lucas-Lledó JI, Howe DK, Lewis SC, Okamoto K, Thomas WK, Lynch M, Baer CF.

Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16310-4. doi: 10.1073/pnas.0904895106. Epub 2009 Sep 10.

17.

Evolution of Caenorhabditis mitochondrial genome pseudogenes and Caenorhabditis briggsae natural isolates.

Raboin MJ, Timko AF, Howe DK, Félix MA, Denver DR.

Mol Biol Evol. 2010 May;27(5):1087-96. doi: 10.1093/molbev/msp318. Epub 2009 Dec 21.

18.

Mutation rates and intraspecific divergence of the mitochondrial genome of Pristionchus pacificus.

Molnar RI, Bartelmes G, Dinkelacker I, Witte H, Sommer RJ.

Mol Biol Evol. 2011 Aug;28(8):2317-26. doi: 10.1093/molbev/msr057. Epub 2011 Mar 2.

PMID:
21368317
19.

Rapid fitness recovery in mutationally degraded lines of Caenorhabditis elegans.

Estes S, Lynch M.

Evolution. 2003 May;57(5):1022-30.

PMID:
12836820
20.

Purifying selection in mammalian mitochondrial protein-coding genes is highly effective and congruent with evolution of nuclear genes.

Popadin KY, Nikolaev SI, Junier T, Baranova M, Antonarakis SE.

Mol Biol Evol. 2013 Feb;30(2):347-55. doi: 10.1093/molbev/mss219. Epub 2012 Sep 14.

PMID:
22983951

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