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Items: 1 to 20 of 95

1.

Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences.

Poznik GD, Xue Y, Mendez FL, Willems TF, Massaia A, Wilson Sayres MA, Ayub Q, McCarthy SA, Narechania A, Kashin S, Chen Y, Banerjee R, Rodriguez-Flores JL, Cerezo M, Shao H, Gymrek M, Malhotra A, Louzada S, Desalle R, Ritchie GR, Cerveira E, Fitzgerald TW, Garrison E, Marcketta A, Mittelman D, Romanovitch M, Zhang C, Zheng-Bradley X, Abecasis GR, McCarroll SA, Flicek P, Underhill PA, Coin L, Zerbino DR, Yang F, Lee C, Clarke L, Auton A, Erlich Y, Handsaker RE; 1000 Genomes Project Consortium, Bustamante CD, Tyler-Smith C.

Nat Genet. 2016 Jun;48(6):593-9. doi: 10.1038/ng.3559. Epub 2016 Apr 25. Review.

2.

A calibrated human Y-chromosomal phylogeny based on resequencing.

Wei W, Ayub Q, Chen Y, McCarthy S, Hou Y, Carbone I, Xue Y, Tyler-Smith C.

Genome Res. 2013 Feb;23(2):388-95. doi: 10.1101/gr.143198.112. Epub 2012 Oct 4.

3.

The Y-chromosome tree bursts into leaf: 13,000 high-confidence SNPs covering the majority of known clades.

Hallast P, Batini C, Zadik D, Maisano Delser P, Wetton JH, Arroyo-Pardo E, Cavalleri GL, de Knijff P, Destro Bisol G, Dupuy BM, Eriksen HA, Jorde LB, King TE, Larmuseau MH, López de Munain A, López-Parra AM, Loutradis A, Milasin J, Novelletto A, Pamjav H, Sajantila A, Schempp W, Sears M, Tolun A, Tyler-Smith C, Van Geystelen A, Watkins S, Winney B, Jobling MA.

Mol Biol Evol. 2015 Mar;32(3):661-73. doi: 10.1093/molbev/msu327. Epub 2014 Dec 2.

4.
5.

Molecular dissection of the basal clades in the human Y chromosome phylogenetic tree.

Scozzari R, Massaia A, D'Atanasio E, Myres NM, Perego UA, Trombetta B, Cruciani F.

PLoS One. 2012;7(11):e49170. doi: 10.1371/journal.pone.0049170. Epub 2012 Nov 7.

6.

Phylogeny of Y-chromosome haplogroup C3b-F1756, an important paternal lineage in Altaic-speaking populations.

Wei LH, Huang YZ, Yan S, Wen SQ, Wang LX, Du PX, Yao DL, Li SL, Yang YJ, Jin L, Li H.

J Hum Genet. 2017 Oct;62(10):915-918. doi: 10.1038/jhg.2017.60. Epub 2017 Jun 1.

PMID:
28566770
7.

Analysis of 62 hybrid assembled human Y chromosomes exposes rapid structural changes and high rates of gene conversion.

Skov L; Danish Pan Genome Consortium, Schierup MH.

PLoS Genet. 2017 Aug 28;13(8):e1006834. doi: 10.1371/journal.pgen.1006834. eCollection 2017 Aug.

8.

DAZ gene copies: evidence of Y chromosome evolution.

Fernandes AT, Fernandes S, Gonçalves R, Sá R, Costa P, Rosa A, Ferrás C, Sousa M, Brehm A, Barros A.

Mol Hum Reprod. 2006 Aug;12(8):519-23. Epub 2006 Jun 15.

PMID:
16777954
9.

Structural variation on the short arm of the human Y chromosome: recurrent multigene deletions encompassing Amelogenin Y.

Jobling MA, Lo IC, Turner DJ, Bowden GR, Lee AC, Xue Y, Carvalho-Silva D, Hurles ME, Adams SM, Chang YM, Kraaijenbrink T, Henke J, Guanti G, McKeown B, van Oorschot RA, Mitchell RJ, de Knijff P, Tyler-Smith C, Parkin EJ.

Hum Mol Genet. 2007 Feb 1;16(3):307-16. Epub 2006 Dec 22.

10.

Low-pass DNA sequencing of 1200 Sardinians reconstructs European Y-chromosome phylogeny.

Francalacci P, Morelli L, Angius A, Berutti R, Reinier F, Atzeni R, Pilu R, Busonero F, Maschio A, Zara I, Sanna D, Useli A, Urru MF, Marcelli M, Cusano R, Oppo M, Zoledziewska M, Pitzalis M, Deidda F, Porcu E, Poddie F, Kang HM, Lyons R, Tarrier B, Gresham JB, Li B, Tofanelli S, Alonso S, Dei M, Lai S, Mulas A, Whalen MB, Uzzau S, Jones C, Schlessinger D, Abecasis GR, Sanna S, Sidore C, Cucca F.

Science. 2013 Aug 2;341(6145):565-9. doi: 10.1126/science.1237947.

11.

New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree.

Karafet TM, Mendez FL, Meilerman MB, Underhill PA, Zegura SL, Hammer MF.

Genome Res. 2008 May;18(5):830-8. doi: 10.1101/gr.7172008. Epub 2008 Apr 2.

12.

Recurrent mutation in SNPs within Y chromosome E3b (E-M215) haplogroup: a rebuttal.

Cruciani F, Trombetta B, Novelletto A, Scozzari R.

Am J Hum Biol. 2008 Sep-Oct;20(5):614-6. doi: 10.1002/ajhb.20790.

PMID:
18449920
13.

Deep phylogenetic analysis of haplogroup G1 provides estimates of SNP and STR mutation rates on the human Y-chromosome and reveals migrations of Iranic speakers.

Balanovsky O, Zhabagin M, Agdzhoyan A, Chukhryaeva M, Zaporozhchenko V, Utevska O, Highnam G, Sabitov Z, Greenspan E, Dibirova K, Skhalyakho R, Kuznetsova M, Koshel S, Yusupov Y, Nymadawa P, Zhumadilov Z, Pocheshkhova E, Haber M, Zalloua PA, Yepiskoposyan L, Dybo A, Tyler-Smith C, Balanovska E.

PLoS One. 2015 Apr 7;10(4):e0122968. doi: 10.1371/journal.pone.0122968. eCollection 2015.

14.

Understanding the Y chromosome variation in Korea--relevance of combined haplogroup and haplotype analyses.

Park MJ, Lee HY, Yang WI, Shin KJ.

Int J Legal Med. 2012 Jul;126(4):589-99. doi: 10.1007/s00414-012-0703-9. Epub 2012 May 9.

PMID:
22569803
15.
16.

Indigenous and foreign Y-chromosomes characterize the Lingayat and Vokkaliga populations of Southwest India.

Chennakrishnaiah S, Perez D, Gayden T, Rivera L, Regueiro M, Herrera RJ.

Gene. 2013 Sep 10;526(2):96-106. doi: 10.1016/j.gene.2013.04.074. Epub 2013 May 7.

PMID:
23664983
17.

Introduction of an single nucleodite polymorphism-based "Major Y-chromosome haplogroup typing kit" suitable for predicting the geographical origin of male lineages.

Brión M, Sanchez JJ, Balogh K, Thacker C, Blanco-Verea A, Børsting C, Stradmann-Bellinghausen B, Bogus M, Syndercombe-Court D, Schneider PM, Carracedo A, Morling N.

Electrophoresis. 2005 Dec;26(23):4411-20.

PMID:
16273584
18.

Population structure of Y chromosome SNP haplogroups in the United States and forensic implications for constructing Y chromosome STR databases.

Hammer MF, Chamberlain VF, Kearney VF, Stover D, Zhang G, Karafet T, Walsh B, Redd AJ.

Forensic Sci Int. 2006 Dec 1;164(1):45-55. Epub 2005 Dec 5.

PMID:
16337103
19.

The Y-chromosome short tandem repeats variation within haplogroup E3b: evidence of recurrent mutation in SNP.

Fernandes AT, Rosa A, Gonçalves R, Jesus J, Brehm A.

Am J Hum Biol. 2008 Mar-Apr;20(2):185-90.

PMID:
17990327
20.

A new topology of the human Y chromosome haplogroup E1b1 (E-P2) revealed through the use of newly characterized binary polymorphisms.

Trombetta B, Cruciani F, Sellitto D, Scozzari R.

PLoS One. 2011 Jan 6;6(1):e16073. doi: 10.1371/journal.pone.0016073.

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