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Items: 1 to 20 of 199

1.

SNP discovery in common bean by restriction-associated DNA (RAD) sequencing for genetic diversity and population structure analysis.

Valdisser PA, Pappas GJ Jr, de Menezes IP, Müller BS, Pereira WJ, Narciso MG, Brondani C, Souza TL, Borba TC, Vianello RP.

Mol Genet Genomics. 2016 Jun;291(3):1277-91. doi: 10.1007/s00438-016-1182-3. Epub 2016 Mar 1.

PMID:
26932372
2.

In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping.

Valdisser PAMR, Pereira WJ, Almeida Filho JE, Müller BSF, Coelho GRC, de Menezes IPP, Vianna JPG, Zucchi MI, Lanna AC, Coelho ASG, de Oliveira JP, Moraes ADC, Brondani C, Vianello RP.

BMC Genomics. 2017 May 30;18(1):423. doi: 10.1186/s12864-017-3805-4.

3.

Microsatellite marker diversity in common bean (Phaseolus vulgaris L.).

Blair MW, Giraldo MC, Buendía HF, Tovar E, Duque MC, Beebe SE.

Theor Appl Genet. 2006 Jun;113(1):100-9. Epub 2006 Apr 14.

PMID:
16614831
4.

Single strand conformation polymorphism based SNP and Indel markers for genetic mapping and synteny analysis of common bean (Phaseolus vulgaris L.).

Galeano CH, Fernández AC, Gómez M, Blair MW.

BMC Genomics. 2009 Dec 23;10:629. doi: 10.1186/1471-2164-10-629.

5.

Gene-based SSR markers for common bean (Phaseolus vulgaris L.) derived from root and leaf tissue ESTs: an integration of the BMc series.

Blair MW, Hurtado N, Chavarro CM, Muñoz-Torres MC, Giraldo MC, Pedraza F, Tomkins J, Wing R.

BMC Plant Biol. 2011 Mar 22;11:50. doi: 10.1186/1471-2229-11-50.

6.

Nucleotide diversity based on phaseolin and iron reductase genes in common bean accessions of different geographical origins.

Diniz AL, Zucchi MI, Santini L, Benchimol-Reis LL, Fungaro MH, Vieira ML.

Genome. 2014 Feb;57(2):69-77. doi: 10.1139/gen-2013-0183. Epub 2014 Feb 9.

PMID:
24702064
7.

Uneven recombination rate and linkage disequilibrium across a reference SNP map for common bean (Phaseolus vulgaris L.).

Blair MW, Cortés AJ, Farmer AD, Huang W, Ambachew D, Penmetsa RV, Carrasquilla-Garcia N, Assefa T, Cannon SB.

PLoS One. 2018 Mar 9;13(3):e0189597. doi: 10.1371/journal.pone.0189597. eCollection 2018.

8.

Development and diversity of Andean-derived, gene-based microsatellites for common bean (Phaseolus vulgaris L.).

Blair MW, Torres MM, Giraldo MC, Pedraza F.

BMC Plant Biol. 2009 Jul 31;9:100. doi: 10.1186/1471-2229-9-100.

9.

SNP marker diversity in common bean (Phaseolus vulgaris L.).

Cortés AJ, Chavarro MC, Blair MW.

Theor Appl Genet. 2011 Sep;123(5):827-45. doi: 10.1007/s00122-011-1630-8. Epub 2011 Jul 23.

PMID:
21785951
10.

A high-throughput SNP marker system for parental polymorphism screening, and diversity analysis in common bean (Phaseolus vulgaris L.).

Blair MW, Cortés AJ, Penmetsa RV, Farmer A, Carrasquilla-Garcia N, Cook DR.

Theor Appl Genet. 2013 Feb;126(2):535-48. doi: 10.1007/s00122-012-1999-z. Epub 2012 Nov 3.

PMID:
23124389
11.

High throughput SNP discovery and genotyping in grapevine (Vitis vinifera L.) by combining a re-sequencing approach and SNPlex technology.

Lijavetzky D, Cabezas JA, Ibáñez A, Rodríguez V, Martínez-Zapater JM.

BMC Genomics. 2007 Nov 19;8:424.

12.

Domestication patterns in common bean (Phaseolus vulgaris L.) and the origin of the Mesoamerican and Andean cultivated races.

Chacón S MI, Pickersgill B, Debouck DG.

Theor Appl Genet. 2005 Feb;110(3):432-44. Epub 2005 Jan 18.

PMID:
15655667
13.

Structure of genetic diversity in the two major gene pools of common bean (Phaseolus vulgaris L., Fabaceae).

Kwak M, Gepts P.

Theor Appl Genet. 2009 Mar;118(5):979-92. doi: 10.1007/s00122-008-0955-4. Epub 2009 Jan 8.

PMID:
19130029
14.

Construction and EST sequencing of full-length, drought stress cDNA libraries for common beans (Phaseolus vulgaris L.).

Blair MW, Fernandez AC, Ishitani M, Moreta D, Seki M, Ayling S, Shinozaki K.

BMC Plant Biol. 2011 Nov 25;11:171. doi: 10.1186/1471-2229-11-171.

15.

Linkage maps of the Atlantic salmon (Salmo salar) genome derived from RAD sequencing.

Gonen S, Lowe NR, Cezard T, Gharbi K, Bishop SC, Houston RD.

BMC Genomics. 2014 Feb 27;15:166. doi: 10.1186/1471-2164-15-166.

16.

Analysis of BAC-end sequences in common bean (Phaseolus vulgaris L.) towards the development and characterization of long motifs SSRs.

Müller BS, Sakamoto T, de Menezes IP, Prado GS, Martins WS, Brondani C, de Barros EG, Vianello RP.

Plant Mol Biol. 2014 Nov;86(4-5):455-70. doi: 10.1007/s11103-014-0240-7. Epub 2014 Aug 28.

PMID:
25164100
17.

Genetic diversity, seed size associations and population structure of a core collection of common beans (Phaseolus vulgaris L.).

Blair MW, Díaz LM, Buendía HF, Duque MC.

Theor Appl Genet. 2009 Oct;119(6):955-72. doi: 10.1007/s00122-009-1064-8. Epub 2009 Aug 18.

PMID:
19688198
18.

Identification of SNP and SSR markers in eggplant using RAD tag sequencing.

Barchi L, Lanteri S, Portis E, Acquadro A, Valè G, Toppino L, Rotino GL.

BMC Genomics. 2011 Jun 10;12:304. doi: 10.1186/1471-2164-12-304.

19.
20.

Evolution of SSR diversity from wild types to U.S. advanced cultivars in the Andean and Mesoamerican domestications of common bean (Phaseolus vulgaris).

Gioia T, Logozzo G, Marzario S, Spagnoletti Zeuli P, Gepts P.

PLoS One. 2019 Jan 31;14(1):e0211342. doi: 10.1371/journal.pone.0211342. eCollection 2019.

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