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Items: 1 to 20 of 94

1.

Remarkably Divergent Regions Punctuate the Genome Assembly of the Caenorhabditis elegans Hawaiian Strain CB4856.

Thompson OA, Snoek LB, Nijveen H, Sterken MG, Volkers RJ, Brenchley R, Van't Hof A, Bevers RP, Cossins AR, Yanai I, Hajnal A, Schmid T, Perkins JD, Spencer D, Kruglyak L, Andersen EC, Moerman DG, Hillier LW, Kammenga JE, Waterston RH.

Genetics. 2015 Jul;200(3):975-89. doi: 10.1534/genetics.115.175950. Epub 2015 May 19.

2.

Genome-wide variations in a natural isolate of the nematode Caenorhabditis elegans.

Vergara IA, Tarailo-Graovac M, Frech C, Wang J, Qin Z, Zhang T, She R, Chu JS, Wang K, Chen N.

BMC Genomics. 2014 Apr 2;15:255. doi: 10.1186/1471-2164-15-255.

3.

Shifting patterns of natural variation in the nuclear genome of caenorhabditis elegans.

Solorzano E, Okamoto K, Datla P, Sung W, Bergeron RD, Thomas WK.

BMC Evol Biol. 2011 Jun 16;11:168. doi: 10.1186/1471-2148-11-168.

4.

Copy number variation in the genomes of twelve natural isolates of Caenorhabditis elegans.

Maydan JS, Lorch A, Edgley ML, Flibotte S, Moerman DG.

BMC Genomics. 2010 Jan 25;11:62. doi: 10.1186/1471-2164-11-62.

5.

Mitochondrial DNA variant in COX1 subunit significantly alters energy metabolism of geographically divergent wild isolates in Caenorhabditis elegans.

Dingley SD, Polyak E, Ostrovsky J, Srinivasan S, Lee I, Rosenfeld AB, Tsukikawa M, Xiao R, Selak MA, Coon JJ, Hebert AS, Grimsrud PA, Kwon YJ, Pagliarini DJ, Gai X, Schurr TG, Hüttemann M, Nakamaru-Ogiso E, Falk MJ.

J Mol Biol. 2014 May 29;426(11):2199-216. doi: 10.1016/j.jmb.2014.02.009. Epub 2014 Feb 14.

6.

Mos1-mediated transgenesis to probe consequences of single gene mutations in variation-rich isolates of Caenorhabditis elegans.

Tarailo-Graovac M, Chen N.

PLoS One. 2012;7(11):e48762. doi: 10.1371/journal.pone.0048762. Epub 2012 Nov 14.

7.

Rapid high resolution single nucleotide polymorphism-comparative genome hybridization mapping in Caenorhabditis elegans.

Flibotte S, Edgley ML, Maydan J, Taylor J, Zapf R, Waterston R, Moerman DG.

Genetics. 2009 Jan;181(1):33-7. doi: 10.1534/genetics.108.096487. Epub 2008 Oct 28.

8.

High-throughput gene mapping in Caenorhabditis elegans.

Swan KA, Curtis DE, McKusick KB, Voinov AV, Mapa FA, Cancilla MR.

Genome Res. 2002 Jul;12(7):1100-5.

9.

A genome-wide library of CB4856/N2 introgression lines of Caenorhabditis elegans.

Doroszuk A, Snoek LB, Fradin E, Riksen J, Kammenga J.

Nucleic Acids Res. 2009 Sep;37(16):e110. doi: 10.1093/nar/gkp528. Epub 2009 Jun 19.

10.

Natural variations of cold tolerance and temperature acclimation in Caenorhabditis elegans.

Okahata M, Ohta A, Mizutani H, Minakuchi Y, Toyoda A, Kuhara A.

J Comp Physiol B. 2016 Dec;186(8):985-998. Epub 2016 Jun 18.

11.

Genomic sequence of a mutant strain of Caenorhabditis elegans with an altered recombination pattern.

Rose AM, O'Neil NJ, Bilenky M, Butterfield YS, Malhis N, Flibotte S, Jones MR, Marra M, Baillie DL, Jones SJ.

BMC Genomics. 2010 Feb 23;11:131. doi: 10.1186/1471-2164-11-131.

12.

Multigenic natural variation underlies Caenorhabditis elegans olfactory preference for the bacterial pathogen Serratia marcescens.

Glater EE, Rockman MV, Bargmann CI.

G3 (Bethesda). 2014 Feb 19;4(2):265-76. doi: 10.1534/g3.113.008649.

13.

Whole genome sequencing highlights genetic changes associated with laboratory domestication of C. elegans.

Weber KP, De S, Kozarewa I, Turner DJ, Babu MM, de Bono M.

PLoS One. 2010 Nov 11;5(11):e13922. doi: 10.1371/journal.pone.0013922.

14.

Rapid gene mapping in Caenorhabditis elegans using a high density polymorphism map.

Wicks SR, Yeh RT, Gish WR, Waterston RH, Plasterk RH.

Nat Genet. 2001 Jun;28(2):160-4.

PMID:
11381264
15.
16.

A genome-wide view of Caenorhabditis elegans base-substitution mutation processes.

Denver DR, Dolan PC, Wilhelm LJ, Sung W, Lucas-Lledó JI, Howe DK, Lewis SC, Okamoto K, Thomas WK, Lynch M, Baer CF.

Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16310-4. doi: 10.1073/pnas.0904895106. Epub 2009 Sep 10.

17.

The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics.

Stein LD, Bao Z, Blasiar D, Blumenthal T, Brent MR, Chen N, Chinwalla A, Clarke L, Clee C, Coghlan A, Coulson A, D'Eustachio P, Fitch DH, Fulton LA, Fulton RE, Griffiths-Jones S, Harris TW, Hillier LW, Kamath R, Kuwabara PE, Mardis ER, Marra MA, Miner TL, Minx P, Mullikin JC, Plumb RW, Rogers J, Schein JE, Sohrmann M, Spieth J, Stajich JE, Wei C, Willey D, Wilson RK, Durbin R, Waterston RH.

PLoS Biol. 2003 Nov;1(2):E45. Epub 2003 Nov 17.

18.

The million mutation project: a new approach to genetics in Caenorhabditis elegans.

Thompson O, Edgley M, Strasbourger P, Flibotte S, Ewing B, Adair R, Au V, Chaudhry I, Fernando L, Hutter H, Kieffer A, Lau J, Lee N, Miller A, Raymant G, Shen B, Shendure J, Taylor J, Turner EH, Hillier LW, Moerman DG, Waterston RH.

Genome Res. 2013 Oct;23(10):1749-62. doi: 10.1101/gr.157651.113. Epub 2013 Jun 25.

19.

Natural Genetic Variation Differentially Affects the Proteome and Transcriptome in Caenorhabditis elegans.

Kamkina P, Snoek LB, Grossmann J, Volkers RJ, Sterken MG, Daube M, Roschitzki B, Fortes C, Schlapbach R, Roth A, von Mering C, Hengartner MO, Schrimpf SP, Kammenga JE.

Mol Cell Proteomics. 2016 May;15(5):1670-80. doi: 10.1074/mcp.M115.052548. Epub 2016 Mar 4.

20.

Single nucleotide polymorphisms in wild isolates of Caenorhabditis elegans.

Koch R, van Luenen HG, van der Horst M, Thijssen KL, Plasterk RH.

Genome Res. 2000 Nov;10(11):1690-6.

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