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Items: 1 to 20 of 102

1.

Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication.

Carneiro M, Rubin CJ, Di Palma F, Albert FW, Alföldi J, Martinez Barrio A, Pielberg G, Rafati N, Sayyab S, Turner-Maier J, Younis S, Afonso S, Aken B, Alves JM, Barrell D, Bolet G, Boucher S, Burbano HA, Campos R, Chang JL, Duranthon V, Fontanesi L, Garreau H, Heiman D, Johnson J, Mage RG, Peng Z, Queney G, Rogel-Gaillard C, Ruffier M, Searle S, Villafuerte R, Xiong A, Young S, Forsberg-Nilsson K, Good JM, Lander ES, Ferrand N, Lindblad-Toh K, Andersson L.

Science. 2014 Aug 29;345(6200):1074-1079. doi: 10.1126/science.1253714.

2.

Whole-genome resequencing reveals loci under selection during chicken domestication.

Rubin CJ, Zody MC, Eriksson J, Meadows JR, Sherwood E, Webster MT, Jiang L, Ingman M, Sharpe T, Ka S, Hallböök F, Besnier F, Carlborg O, Bed'hom B, Tixier-Boichard M, Jensen P, Siegel P, Lindblad-Toh K, Andersson L.

Nature. 2010 Mar 25;464(7288):587-91. doi: 10.1038/nature08832. Epub 2010 Mar 10.

PMID:
20220755
3.

Comparative analysis of the domestic cat genome reveals genetic signatures underlying feline biology and domestication.

Montague MJ, Li G, Gandolfi B, Khan R, Aken BL, Searle SM, Minx P, Hillier LW, Koboldt DC, Davis BW, Driscoll CA, Barr CS, Blackistone K, Quilez J, Lorente-Galdos B, Marques-Bonet T, Alkan C, Thomas GW, Hahn MW, Menotti-Raymond M, O'Brien SJ, Wilson RK, Lyons LA, Murphy WJ, Warren WC.

Proc Natl Acad Sci U S A. 2014 Dec 2;111(48):17230-5. doi: 10.1073/pnas.1410083111. Epub 2014 Nov 10.

4.

Elevated Proportions of Deleterious Genetic Variation in Domestic Animals and Plants.

Makino T, Rubin CJ, Carneiro M, Axelsson E, Andersson L, Webster MT.

Genome Biol Evol. 2018 Jan 1;10(1):276-290. doi: 10.1093/gbe/evy004.

5.

The genetic structure of domestic rabbits.

Carneiro M, Afonso S, Geraldes A, Garreau H, Bolet G, Boucher S, Tircazes A, Queney G, Nachman MW, Ferrand N.

Mol Biol Evol. 2011 Jun;28(6):1801-16. doi: 10.1093/molbev/msr003. Epub 2011 Jan 7.

6.

Animal domestication. The genes that turned wildcats into kitty cats.

Grimm D.

Science. 2014 Nov 14;346(6211):799. doi: 10.1126/science.346.6211.799. No abstract available.

PMID:
25395514
7.

Candidate genes underlying heritable differences in reproductive seasonality between wild and domestic rabbits.

Carneiro M, Piorno V, Rubin CJ, Alves JM, Ferrand N, Alves PC, Andersson L.

Anim Genet. 2015 Aug;46(4):418-25. doi: 10.1111/age.12299. Epub 2015 May 22.

PMID:
25999142
8.

Molecular microevolution and epigenetic patterns of the long non-coding gene H19 show its potential function in pig domestication and breed divergence.

Li C, Wang X, Cai H, Fu Y, Luan Y, Wang W, Xiang H, Li C.

BMC Evol Biol. 2016 Apr 23;16:87. doi: 10.1186/s12862-016-0657-5.

10.

Genomic diversity and evolution of the head crest in the rock pigeon.

Shapiro MD, Kronenberg Z, Li C, Domyan ET, Pan H, Campbell M, Tan H, Huff CD, Hu H, Vickrey AI, Nielsen SC, Stringham SA, Hu H, Willerslev E, Gilbert MT, Yandell M, Zhang G, Wang J.

Science. 2013 Mar 1;339(6123):1063-7. doi: 10.1126/science.1230422. Epub 2013 Jan 31.

11.

Genome-wide definition of selective sweeps reveals molecular evidence of trait-driven domestication among elite goat (Capra species) breeds for the production of dairy, cashmere, and meat.

Zhang B, Chang L, Lan X, Asif N, Guan F, Fu D, Li B, Yan C, Zhang H, Zhang X, Huang Y, Chen H, Yu J, Li S.

Gigascience. 2018 Dec 1;7(12). doi: 10.1093/gigascience/giy105.

12.

A genome-wide scan for signatures of directional selection in domesticated pigs.

Moon S, Kim TH, Lee KT, Kwak W, Lee T, Lee SW, Kim MJ, Cho K, Kim N, Chung WH, Sung S, Park T, Cho S, Groenen MA, Nielsen R, Kim Y, Kim H.

BMC Genomics. 2015 Feb 25;16:130. doi: 10.1186/s12864-015-1330-x.

13.

Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication.

Vonholdt BM, Pollinger JP, Lohmueller KE, Han E, Parker HG, Quignon P, Degenhardt JD, Boyko AR, Earl DA, Auton A, Reynolds A, Bryc K, Brisbin A, Knowles JC, Mosher DS, Spady TC, Elkahloun A, Geffen E, Pilot M, Jedrzejewski W, Greco C, Randi E, Bannasch D, Wilton A, Shearman J, Musiani M, Cargill M, Jones PG, Qian Z, Huang W, Ding ZL, Zhang YP, Bustamante CD, Ostrander EA, Novembre J, Wayne RK.

Nature. 2010 Apr 8;464(7290):898-902. doi: 10.1038/nature08837. Epub 2010 Mar 17.

14.

Molecular evolution of the Bovini tribe (Bovidae, Bovinae): is there evidence of rapid evolution or reduced selective constraint in Domestic cattle?

MacEachern S, McEwan J, McCulloch A, Mather A, Savin K, Goddard M.

BMC Genomics. 2009 Apr 24;10:179. doi: 10.1186/1471-2164-10-179.

15.

Blood biochemical polymorphisms as markers for genetic characteristics of wild Spanish and domestic rabbits.

Arana A, Zaragoza P, Rodellar C, Amorena B.

Genetica. 1989;79(1):1-9.

PMID:
2591740
16.

Evidence of long-term gene flow and selection during domestication from analyses of Eurasian wild and domestic pig genomes.

Frantz LA, Schraiber JG, Madsen O, Megens HJ, Cagan A, Bosse M, Paudel Y, Crooijmans RP, Larson G, Groenen MA.

Nat Genet. 2015 Oct;47(10):1141-8. doi: 10.1038/ng.3394. Epub 2015 Aug 31.

PMID:
26323058
17.

The legacy of domestication: accumulation of deleterious mutations in the dog genome.

Cruz F, Vilà C, Webster MT.

Mol Biol Evol. 2008 Nov;25(11):2331-6. doi: 10.1093/molbev/msn177. Epub 2008 Aug 9.

PMID:
18689870
18.

Reference genome of wild goat (capra aegagrus) and sequencing of goat breeds provide insight into genic basis of goat domestication.

Dong Y, Zhang X, Xie M, Arefnezhad B, Wang Z, Wang W, Feng S, Huang G, Guan R, Shen W, Bunch R, McCulloch R, Li Q, Li B, Zhang G, Xu X, Kijas JW, Salekdeh GH, Wang W, Jiang Y.

BMC Genomics. 2015 Jun 5;16:431. doi: 10.1186/s12864-015-1606-1.

19.

Genome-wide mapping reveals conservation of promoter DNA methylation following chicken domestication.

Li Q, Wang Y, Hu X, Zhao Y, Li N.

Sci Rep. 2015 Mar 4;5:8748. doi: 10.1038/srep08748.

20.

Genomic signatures of domestication on neurogenetic genes in Drosophila melanogaster.

Stanley CE Jr, Kulathinal RJ.

BMC Evol Biol. 2016 Jan 5;16:6. doi: 10.1186/s12862-015-0580-1.

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