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Items: 1 to 20 of 162

1.

A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor.

Luo MC, Gu YQ, You FM, Deal KR, Ma Y, Hu Y, Huo N, Wang Y, Wang J, Chen S, Jorgensen CM, Zhang Y, McGuire PE, Pasternak S, Stein JC, Ware D, Kramer M, McCombie WR, Kianian SF, Martis MM, Mayer KF, Sehgal SK, Li W, Gill BS, Bevan MW, Simková H, Dolezel J, Weining S, Lazo GR, Anderson OD, Dvorak J.

Proc Natl Acad Sci U S A. 2013 May 7;110(19):7940-5. doi: 10.1073/pnas.1219082110. Epub 2013 Apr 22.

2.

Physical mapping of a large plant genome using global high-information-content-fingerprinting: the distal region of the wheat ancestor Aegilops tauschii chromosome 3DS.

Fleury D, Luo MC, Dvorak J, Ramsay L, Gill BS, Anderson OD, You FM, Shoaei Z, Deal KR, Langridge P.

BMC Genomics. 2010 Jun 17;11:382. doi: 10.1186/1471-2164-11-382.

3.

Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae.

Luo MC, Deal KR, Akhunov ED, Akhunova AR, Anderson OD, Anderson JA, Blake N, Clegg MT, Coleman-Derr D, Conley EJ, Crossman CC, Dubcovsky J, Gill BS, Gu YQ, Hadam J, Heo HY, Huo N, Lazo G, Ma Y, Matthews DE, McGuire PE, Morrell PL, Qualset CO, Renfro J, Tabanao D, Talbert LE, Tian C, Toleno DM, Warburton ML, You FM, Zhang W, Dvorak J.

Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15780-5. doi: 10.1073/pnas.0908195106. Epub 2009 Aug 26.

4.

Gene space dynamics during the evolution of Aegilops tauschii, Brachypodium distachyon, Oryza sativa, and Sorghum bicolor genomes.

Massa AN, Wanjugi H, Deal KR, O'Brien K, You FM, Maiti R, Chan AP, Gu YQ, Luo MC, Anderson OD, Rabinowicz PD, Dvorak J, Devos KM.

Mol Biol Evol. 2011 Sep;28(9):2537-47. doi: 10.1093/molbev/msr080. Epub 2011 Apr 6.

5.

Radiation hybrid maps of the D-genome of Aegilops tauschii and their application in sequence assembly of large and complex plant genomes.

Kumar A, Seetan R, Mergoum M, Tiwari VK, Iqbal MJ, Wang Y, Al-Azzam O, Šimková H, Luo MC, Dvorak J, Gu YQ, Denton A, Kilian A, Lazo GR, Kianian SF.

BMC Genomics. 2015 Oct 16;16:800. doi: 10.1186/s12864-015-2030-2.

6.

A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat.

Gu YQ, Ma Y, Huo N, Vogel JP, You FM, Lazo GR, Nelson WM, Soderlund C, Dvorak J, Anderson OD, Luo MC.

BMC Genomics. 2009 Oct 27;10:496. doi: 10.1186/1471-2164-10-496.

7.

Genome sequence of the progenitor of the wheat D genome Aegilops tauschii.

Luo MC, Gu YQ, Puiu D, Wang H, Twardziok SO, Deal KR, Huo N, Zhu T, Wang L, Wang Y, McGuire PE, Liu S, Long H, Ramasamy RK, Rodriguez JC, Van SL, Yuan L, Wang Z, Xia Z, Xiao L, Anderson OD, Ouyang S, Liang Y, Zimin AV, Pertea G, Qi P, Bennetzen JL, Dai X, Dawson MW, Müller HG, Kugler K, Rivarola-Duarte L, Spannagl M, Mayer KFX, Lu FH, Bevan MW, Leroy P, Li P, You FM, Sun Q, Liu Z, Lyons E, Wicker T, Salzberg SL, Devos KM, Dvořák J.

Nature. 2017 Nov 23;551(7681):498-502. doi: 10.1038/nature24486. Epub 2017 Nov 15.

PMID:
29143815
8.

Discovery of high-confidence single nucleotide polymorphisms from large-scale de novo analysis of leaf transcripts of Aegilops tauschii, a wild wheat progenitor.

Iehisa JC, Shimizu A, Sato K, Nasuda S, Takumi S.

DNA Res. 2012 Dec;19(6):487-97. doi: 10.1093/dnares/dss028. Epub 2012 Nov 2.

9.

Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions.

Nishijima R, Yoshida K, Motoi Y, Sato K, Takumi S.

Mol Genet Genomics. 2016 Aug;291(4):1681-94. doi: 10.1007/s00438-016-1211-2. Epub 2016 May 3.

PMID:
27142109
10.
11.

Sequencing and comparative analyses of Aegilops tauschii chromosome arm 3DS reveal rapid evolution of Triticeae genomes.

Xie J, Huo N, Zhou S, Wang Y, Guo G, Deal KR, Ouyang S, Liang Y, Wang Z, Xiao L, Zhu T, Hu T, Tiwari V, Zhang J, Li H, Ni Z, Yao Y, Peng H, Zhang S, Anderson OD, McGuire PE, Dvorak J, Luo MC, Liu Z, Gu YQ, Sun Q.

J Genet Genomics. 2017 Jan 20;44(1):51-61. doi: 10.1016/j.jgg.2016.09.005. Epub 2016 Oct 5.

PMID:
27765484
12.

Aegilops tauschii single nucleotide polymorphisms shed light on the origins of wheat D-genome genetic diversity and pinpoint the geographic origin of hexaploid wheat.

Wang J, Luo MC, Chen Z, You FM, Wei Y, Zheng Y, Dvorak J.

New Phytol. 2013 May;198(3):925-37. doi: 10.1111/nph.12164. Epub 2013 Feb 4.

13.

Genetic and physical mapping of powdery mildew resistance gene MlHLT in Chinese wheat landrace Hulutou.

Wang Z, Li H, Zhang D, Guo L, Chen J, Chen Y, Wu Q, Xie J, Zhang Y, Sun Q, Dvorak J, Luo MC, Liu Z.

Theor Appl Genet. 2015 Feb;128(2):365-73. doi: 10.1007/s00122-014-2436-2. Epub 2014 Dec 4.

PMID:
25471672
15.

Fine mapping of shattering locus Br2 reveals a putative chromosomal inversion polymorphism between the two lineages of Aegilops tauschii.

Zhang Z, Zhu H, Gill BS, Li W.

Theor Appl Genet. 2015 Apr;128(4):745-55. doi: 10.1007/s00122-015-2469-1. Epub 2015 Feb 6.

PMID:
25656150
16.

Development of a D genome specific marker resource for diploid and hexaploid wheat.

Wang Y, Drader T, Tiwari VK, Dong L, Kumar A, Huo N, Ghavami F, Iqbal MJ, Lazo GR, Leonard J, Gill BS, Kianian SF, Luo MC, Gu YQ.

BMC Genomics. 2015 Aug 28;16:646. doi: 10.1186/s12864-015-1852-2.

17.

A high-density cytogenetic map of the Aegilops tauschii genome incorporating retrotransposons and defense-related genes: insights into cereal chromosome structure and function.

Boyko E, Kalendar R, Korzun V, Fellers J, Korol A, Schulman AH, Gill BS.

Plant Mol Biol. 2002 Mar-Apr;48(5-6):767-90.

PMID:
11999849
18.
20.

New insights into structural organization and gene duplication in a 1.75-Mb genomic region harboring the α-gliadin gene family in Aegilops tauschii, the source of wheat D genome.

Huo N, Dong L, Zhang S, Wang Y, Zhu T, Mohr T, Altenbach S, Liu Z, Dvorak J, Anderson OD, Luo MC, Wang D, Gu YQ.

Plant J. 2017 Nov;92(4):571-583. doi: 10.1111/tpj.13675. Epub 2017 Oct 9.

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