Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 125

1.

Signalogs: orthology-based identification of novel signaling pathway components in three metazoans.

Korcsmáros T, Szalay MS, Rovó P, Palotai R, Fazekas D, Lenti K, Farkas IJ, Csermely P, Vellai T.

PLoS One. 2011 May 3;6(5):e19240. doi: 10.1371/journal.pone.0019240.

2.

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons.

Remm M, Storm CE, Sonnhammer EL.

J Mol Biol. 2001 Dec 14;314(5):1041-52.

PMID:
11743721
3.

Comparative analysis of function and interaction of transcription factors in nematodes: extensive conservation of orthology coupled to rapid sequence evolution.

Haerty W, Artieri C, Khezri N, Singh RS, Gupta BP.

BMC Genomics. 2008 Aug 27;9:399. doi: 10.1186/1471-2164-9-399.

4.

OrthoList: a compendium of C. elegans genes with human orthologs.

Shaye DD, Greenwald I.

PLoS One. 2011;6(5):e20085. doi: 10.1371/journal.pone.0020085. Epub 2011 May 25. Erratum in: PLoS One. 2014;9(1). doi:10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

5.

Uniform curation protocol of metazoan signaling pathways to predict novel signaling components.

Pálfy M, Farkas IJ, Vellai T, Korcsmáros T.

Methods Mol Biol. 2013;1021:285-97. doi: 10.1007/978-1-62703-450-0_15.

PMID:
23715991
6.

OrthoClust: an orthology-based network framework for clustering data across multiple species.

Yan KK, Wang D, Rozowsky J, Zheng H, Cheng C, Gerstein M.

Genome Biol. 2014 Aug 28;15(8):R100. doi: 10.1186/gb-2014-15-8-r100.

7.

Functional knowledge transfer for high-accuracy prediction of under-studied biological processes.

Park CY, Wong AK, Greene CS, Rowland J, Guan Y, Bongo LA, Burdine RD, Troyanskaya OG.

PLoS Comput Biol. 2013;9(3):e1002957. doi: 10.1371/journal.pcbi.1002957. Epub 2013 Mar 14.

8.

SignaLink 2 - a signaling pathway resource with multi-layered regulatory networks.

Fazekas D, Koltai M, Türei D, Módos D, Pálfy M, Dúl Z, Zsákai L, Szalay-Bekő M, Lenti K, Farkas IJ, Vellai T, Csermely P, Korcsmáros T.

BMC Syst Biol. 2013 Jan 18;7:7. doi: 10.1186/1752-0509-7-7.

9.

Epsin potentiates Notch pathway activity in Drosophila and C. elegans.

Tian X, Hansen D, Schedl T, Skeath JB.

Development. 2004 Dec;131(23):5807-15.

10.

Genome-wide prediction of C. elegans genetic interactions.

Zhong W, Sternberg PW.

Science. 2006 Mar 10;311(5766):1481-4.

11.

Building and analyzing protein interactome networks by cross-species comparisons.

Wiles AM, Doderer M, Ruan J, Gu TT, Ravi D, Blackman B, Bishop AJ.

BMC Syst Biol. 2010 Mar 30;4:36. doi: 10.1186/1752-0509-4-36.

12.

Integrating computational biology and forward genetics in Drosophila.

Aerts S, Vilain S, Hu S, Tranchevent LC, Barriot R, Yan J, Moreau Y, Hassan BA, Quan XJ.

PLoS Genet. 2009 Jan;5(1):e1000351. doi: 10.1371/journal.pgen.1000351. Epub 2009 Jan 23.

13.

Integration of Drosophila and Human Genetics to Understand Notch Signaling Related Diseases.

Salazar JL, Yamamoto S.

Adv Exp Med Biol. 2018;1066:141-185. doi: 10.1007/978-3-319-89512-3_8. Review.

14.

Notch signaling in the C. elegans embryo.

Priess JR.

WormBook. 2005 Jun 25:1-16. Review.

15.

Information-based methods for predicting gene function from systematic gene knock-downs.

Weirauch MT, Wong CK, Byrne AB, Stuart JM.

BMC Bioinformatics. 2008 Oct 29;9:463. doi: 10.1186/1471-2105-9-463.

17.

Cross-organism learning method to discover new gene functionalities.

Domeniconi G, Masseroli M, Moro G, Pinoli P.

Comput Methods Programs Biomed. 2016 Apr;126:20-34. doi: 10.1016/j.cmpb.2015.12.002. Epub 2015 Dec 17.

PMID:
26724853
18.
19.
20.

Introduction to Notch signaling.

Yamamoto S, Schulze KL, Bellen HJ.

Methods Mol Biol. 2014;1187:1-14. doi: 10.1007/978-1-4939-1139-4_1. Review.

PMID:
25053477

Supplemental Content

Support Center