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Items: 1 to 20 of 114

1.

Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental response.

Zhong M, Niu W, Lu ZJ, Sarov M, Murray JI, Janette J, Raha D, Sheaffer KL, Lam HY, Preston E, Slightham C, Hillier LW, Brock T, Agarwal A, Auerbach R, Hyman AA, Gerstein M, Mango SE, Kim SK, Waterston RH, Reinke V, Snyder M.

PLoS Genet. 2010 Feb 19;6(2):e1000848. doi: 10.1371/journal.pgen.1000848.

2.

Regulation of organogenesis by the Caenorhabditis elegans FoxA protein PHA-4.

Gaudet J, Mango SE.

Science. 2002 Feb 1;295(5556):821-5.

3.

Dynamic chromatin organization during foregut development mediated by the organ selector gene PHA-4/FoxA.

Fakhouri TH, Stevenson J, Chisholm AD, Mango SE.

PLoS Genet. 2010 Aug 12;6(8). pii: e1001060. doi: 10.1371/journal.pgen.1001060.

4.

TRANSCRIPTION. Recruitment of RNA polymerase II by the pioneer transcription factor PHA-4.

Hsu HT, Chen HM, Yang Z, Wang J, Lee NK, Burger A, Zaret K, Liu T, Levine E, Mango SE.

Science. 2015 Jun 19;348(6241):1372-6. doi: 10.1126/science.aab1223. Erratum in: Science. 2015 Oct 16;350(6258):aad5928.

5.

In vitro and in vivo characterization of Caenorhabditis elegans PHA-4/FoxA response elements.

Raharjo WH, Logan BC, Wen S, Kalb JM, Gaudet J.

Dev Dyn. 2010 Aug;239(8):2219-32. doi: 10.1002/dvdy.22359.

6.

Regulatory analysis of the C. elegans genome with spatiotemporal resolution.

Araya CL, Kawli T, Kundaje A, Jiang L, Wu B, Vafeados D, Terrell R, Weissdepp P, Gevirtzman L, Mace D, Niu W, Boyle AP, Xie D, Ma L, Murray JI, Reinke V, Waterston RH, Snyder M.

Nature. 2014 Aug 28;512(7515):400-5. doi: 10.1038/nature13497. Erratum in: Nature. 2015 Dec 3;528(7580):152.

7.

Supplementary nuclear receptor NHR-60 is required for normal embryonic and early larval development of Caenorhabditis elegans.

Simecková K, Brozová E, Vohánka J, Pohludka M, Kostrouch Z, Krause MW, Rall JE, Kostrouchová M.

Folia Biol (Praha). 2007;53(3):85-96.

8.

pha-4 is Ce-fkh-1, a fork head/HNF-3alpha,beta,gamma homolog that functions in organogenesis of the C. elegans pharynx.

Kalb JM, Lau KK, Goszczynski B, Fukushige T, Moons D, Okkema PG, McGhee JD.

Development. 1998 Jun;125(12):2171-80.

9.

Environmentally induced foregut remodeling by PHA-4/FoxA and DAF-12/NHR.

Ao W, Gaudet J, Kent WJ, Muttumu S, Mango SE.

Science. 2004 Sep 17;305(5691):1743-6.

10.

Caenorhabditis elegans TBX-2 Directly Regulates Its Own Expression in a Negative Autoregulatory Loop.

Milton AC, Okkema PG.

G3 (Bethesda). 2015 Apr 14;5(6):1177-86. doi: 10.1534/g3.115.018101.

11.

The histone H3K36 methyltransferase MES-4 acts epigenetically to transmit the memory of germline gene expression to progeny.

Rechtsteiner A, Ercan S, Takasaki T, Phippen TM, Egelhofer TA, Wang W, Kimura H, Lieb JD, Strome S.

PLoS Genet. 2010 Sep 2;6(9):e1001091. doi: 10.1371/journal.pgen.1001091.

13.

Transcription factors GATA/ELT-2 and forkhead/HNF-3/PHA-4 regulate the tropomyosin gene expression in the pharynx and intestine of Caenorhabditis elegans.

Anokye-Danso F, Anyanful A, Sakube Y, Kagawa H.

J Mol Biol. 2008 May 30;379(2):201-11. doi: 10.1016/j.jmb.2007.11.103. Epub 2007 Dec 7.

PMID:
18448117
14.

PHA-4/FoxA cooperates with TAM-1/TRIM to regulate cell fate restriction in the C. elegans foregut.

Kiefer JC, Smith PA, Mango SE.

Dev Biol. 2007 Mar 15;303(2):611-24. Epub 2006 Dec 2.

15.

Whole-genome analysis of temporal gene expression during foregut development.

Gaudet J, Muttumu S, Horner M, Mango SE.

PLoS Biol. 2004 Nov;2(11):e352. Epub 2004 Oct 19.

16.

Regulation of signaling genes by TGFbeta during entry into dauer diapause in C. elegans.

Liu T, Zimmerman KK, Patterson GI.

BMC Dev Biol. 2004 Sep 20;4:11.

17.

Interference between the PHA-4 and PEB-1 transcription factors in formation of the Caenorhabditis elegans pharynx.

Kalb JM, Beaster-Jones L, Fernandez AP, Okkema PG, Goszczynski B, McGhee JD.

J Mol Biol. 2002 Jul 19;320(4):697-704.

PMID:
12095247
18.

The dyf-3 gene encodes a novel protein required for sensory cilium formation in Caenorhabditis elegans.

Murayama T, Toh Y, Ohshima Y, Koga M.

J Mol Biol. 2005 Feb 25;346(3):677-87. Epub 2004 Dec 24.

PMID:
15713455
19.

Development of Caenorhabditis elegans pharynx, with emphasis on its nervous system.

Pilon M, Mörck C.

Acta Pharmacol Sin. 2005 Apr;26(4):396-404. Review.

20.

Genome-wide analysis of sex-enriched gene expression during C. elegans larval development.

Thoemke K, Yi W, Ross JM, Kim S, Reinke V, Zarkower D.

Dev Biol. 2005 Aug 15;284(2):500-8.

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