Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 55

1.

Interpreting top-down mass spectra using spectral alignment.

Frank AM, Pesavento JJ, Mizzen CA, Kelleher NL, Pevzner PA.

Anal Chem. 2008 Apr 1;80(7):2499-505. doi: 10.1021/ac702324u. Epub 2008 Feb 27.

PMID:
18302345
2.

Towards de novo identification of metabolites by analyzing tandem mass spectra.

Böcker S, Rasche F.

Bioinformatics. 2008 Aug 15;24(16):i49-i55. doi: 10.1093/bioinformatics/btn270.

PMID:
18689839
3.

Top-down proteomics on a high-field Fourier transform ion cyclotron resonance mass spectrometer.

Ouvry-Patat SA, Torres MP, Gelfand CA, Quek HH, Easterling M, Speir JP, Borchers CH.

Methods Mol Biol. 2009;492:215-31. doi: 10.1007/978-1-59745-493-3_12.

PMID:
19241035
4.

Simulation of high- and low-resolution mass spectra for assessment of calibration methods.

Turner PG, Taylor S, Goulermas JY, Hampton K.

Rapid Commun Mass Spectrom. 2007;21(3):305-13.

PMID:
17206595
5.

Algorithms and tools for analysis and management of mass spectrometry data.

Veltri P.

Brief Bioinform. 2008 Mar;9(2):144-55. doi: 10.1093/bib/bbn007. Epub 2008 Mar 20.

PMID:
18356204
6.

Proteomics by mass spectrometry: approaches, advances, and applications.

Yates JR, Ruse CI, Nakorchevsky A.

Annu Rev Biomed Eng. 2009;11:49-79. doi: 10.1146/annurev-bioeng-061008-124934. Review.

PMID:
19400705
7.

SALAMI (Spectrum ALignments using high Accuracy Mass and hIgh sensitivity data): how to make the best out of hybrid MS/MS data.

Monigatti F, Steen H.

J Proteome Res. 2008 May;7(5):1984-93. doi: 10.1021/pr7006895. Epub 2008 Apr 12.

PMID:
18407685
8.

A hybrid method for peptide identification using integer linear optimization, local database search, and quadrupole time-of-flight or OrbiTrap tandem mass spectrometry.

DiMaggio PA Jr, Floudas CA, Lu B, Yates JR 3rd.

J Proteome Res. 2008 Apr;7(4):1584-93. doi: 10.1021/pr700577z. Epub 2008 Mar 7.

PMID:
18324765
9.

Unraveling molecular complexity of phosphorylated human cardiac troponin I by top down electron capture dissociation/electron transfer dissociation mass spectrometry.

Zabrouskov V, Ge Y, Schwartz J, Walker JW.

Mol Cell Proteomics. 2008 Oct;7(10):1838-49. doi: 10.1074/mcp.M700524-MCP200. Epub 2008 Apr 28.

10.

Automated intensity descent algorithm for interpretation of complex high-resolution mass spectra.

Chen L, Sze SK, Yang H.

Anal Chem. 2006 Jul 15;78(14):5006-18.

PMID:
16841924
11.

Towards a universal product ion mass spectral library - reproducibility of product ion spectra across eleven different mass spectrometers.

Hopley C, Bristow T, Lubben A, Simpson A, Bull E, Klagkou K, Herniman J, Langley J.

Rapid Commun Mass Spectrom. 2008 Jun;22(12):1779-86. doi: 10.1002/rcm.3545.

PMID:
18470872
12.
13.

Increased confidence in large-scale phosphoproteomics data by complementary mass spectrometric techniques and matching of phosphopeptide data sets.

Alcolea MP, Kleiner O, Cutillas PR.

J Proteome Res. 2009 Aug;8(8):3808-15. doi: 10.1021/pr800955n.

PMID:
19537829
14.

Retention time alignment algorithms for LC/MS data must consider non-linear shifts.

Podwojski K, Fritsch A, Chamrad DC, Paul W, Sitek B, Stühler K, Mutzel P, Stephan C, Meyer HE, Urfer W, Ickstadt K, Rahnenführer J.

Bioinformatics. 2009 Mar 15;25(6):758-64. doi: 10.1093/bioinformatics/btp052. Epub 2009 Jan 28.

PMID:
19176558
15.

Toward high-throughput and reliable peptide identification via MS/MS spectra.

Liu J.

Methods Mol Biol. 2008;484:333-44. doi: 10.1007/978-1-59745-398-1_22.

PMID:
18592190
16.

Increasing the mass accuracy of high-resolution LC-MS data using background ions: a case study on the LTQ-Orbitrap.

Scheltema RA, Kamleh A, Wildridge D, Ebikeme C, Watson DG, Barrett MP, Jansen RC, Breitling R.

Proteomics. 2008 Nov;8(22):4647-56. doi: 10.1002/pmic.200800314.

PMID:
18937253
17.

A strategy for the prior processing of high-resolution mass spectral data obtained from high-dimensional combined fractional diagonal chromatography.

Valkenborg D, Thomas G, Krols L, Kas K, Burzykowski T.

J Mass Spectrom. 2009 Apr;44(4):516-29. doi: 10.1002/jms.1527.

PMID:
19065607
18.

LC-MS for protein characterization: current capabilities and future trends.

Chen G, Pramanik BN.

Expert Rev Proteomics. 2008 Jun;5(3):435-44. doi: 10.1586/14789450.5.3.435. Review.

PMID:
18532911
19.

Mass spectral metabonomics beyond elemental formula: chemical database querying by matching experimental with computational fragmentation spectra.

Hill DW, Kertesz TM, Fontaine D, Friedman R, Grant DF.

Anal Chem. 2008 Jul 15;80(14):5574-82. doi: 10.1021/ac800548g. Epub 2008 Jun 12.

PMID:
18547062
20.

Supplemental Content

Support Center