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Items: 1 to 20 of 25

1.

Loss of Interneuron-Derived Collagen XIX Leads to a Reduction in Perineuronal Nets in the Mammalian Telencephalon.

Su J, Cole J, Fox MA.

ASN Neuro. 2017 Feb;9(1):1759091416689020. doi: 10.1177/1759091416689020.

2.

Collagen XIX is expressed by interneurons and contributes to the formation of hippocampal synapses.

Su J, Gorse K, Ramirez F, Fox MA.

J Comp Neurol. 2010 Jan 10;518(2):229-53. doi: 10.1002/cne.22228.

3.

Trimerization and triple helix stabilization of the collagen XIX NC2 domain.

Boudko SP, Engel J, Bächinger HP.

J Biol Chem. 2008 Dec 5;283(49):34345-51. doi: 10.1074/jbc.M806352200. Epub 2008 Oct 8.

4.

Structure of the human type XIX collagen (COL19A1) gene, which suggests it has arisen from an ancestor gene of the FACIT family.

Khaleduzzaman M, Sumiyoshi H, Ueki Y, Inoguchi K, Ninomiya Y, Yoshioka H.

Genomics. 1997 Oct 15;45(2):304-12.

PMID:
9344653
5.

Collagen-derived matricryptins promote inhibitory nerve terminal formation in the developing neocortex.

Su J, Chen J, Lippold K, Monavarfeshani A, Carrillo GL, Jenkins R, Fox MA.

J Cell Biol. 2016 Mar 14;212(6):721-36. doi: 10.1083/jcb.201509085.

6.

Ubiquitous expression of the alpha1(XIX) collagen gene (Col19a1) during mouse embryogenesis becomes restricted to a few tissues in the adult organism.

Sumiyoshi H, Inoguchi K, Khaleduzzaman M, Ninomiya Y, Yoshioka H.

J Biol Chem. 1997 Jul 4;272(27):17104-11.

7.

Embryonic expression of type XIX collagen is transient and confined to muscle cells.

Sumiyoshi H, Laub F, Yoshioka H, Ramirez F.

Dev Dyn. 2001 Feb;220(2):155-62.

8.

Esophageal muscle physiology and morphogenesis require assembly of a collagen XIX-rich basement membrane zone.

Sumiyoshi H, Mor N, Lee SY, Doty S, Henderson S, Tanaka S, Yoshioka H, Rattan S, Ramirez F.

J Cell Biol. 2004 Aug 16;166(4):591-600. Epub 2004 Aug 9.

9.

Foxf genes integrate tbx5 and hedgehog pathways in the second heart field for cardiac septation.

Hoffmann AD, Yang XH, Burnicka-Turek O, Bosman JD, Ren X, Steimle JD, Vokes SA, McMahon AP, Kalinichenko VV, Moskowitz IP.

PLoS Genet. 2014 Oct 30;10(10):e1004604. doi: 10.1371/journal.pgen.1004604. eCollection 2014 Oct. Erratum in: PLoS Genet. 2016 Dec 29;12 (12 ):e1006533.

10.

Distinct transcriptomic changes in E14.5 mouse skeletal muscle lacking RYR1 or Cav1.1 converge at E18.5.

Filipova D, Henry M, Rotshteyn T, Brunn A, Carstov M, Deckert M, Hescheler J, Sachinidis A, Pfitzer G, Papadopoulos S.

PLoS One. 2018 Mar 15;13(3):e0194428. doi: 10.1371/journal.pone.0194428. eCollection 2018.

11.

DNA microarray analysis of genes involved in p53 mediated apoptosis: activation of Apaf-1.

Kannan K, Kaminski N, Rechavi G, Jakob-Hirsch J, Amariglio N, Givol D.

Oncogene. 2001 Jun 7;20(26):3449-55.

12.

Nell1-deficient mice have reduced expression of extracellular matrix proteins causing cranial and vertebral defects.

Desai J, Shannon ME, Johnson MD, Ruff DW, Hughes LA, Kerley MK, Carpenter DA, Johnson DK, Rinchik EM, Culiat CT.

Hum Mol Genet. 2006 Apr 15;15(8):1329-41. Epub 2006 Mar 14.

PMID:
16537572
13.

Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates.

Miller JA, Nathanson J, Franjic D, Shim S, Dalley RA, Shapouri S, Smith KA, Sunkin SM, Bernard A, Bennett JL, Lee CK, Hawrylycz MJ, Jones AR, Amaral DG, Šestan N, Gage FH, Lein ES.

Development. 2013 Nov;140(22):4633-44. doi: 10.1242/dev.097212. Epub 2013 Oct 23.

14.

GUDMAP: the genitourinary developmental molecular anatomy project.

McMahon AP, Aronow BJ, Davidson DR, Davies JA, Gaido KW, Grimmond S, Lessard JL, Little MH, Potter SS, Wilder EL, Zhang P; GUDMAP project.

J Am Soc Nephrol. 2008 Apr;19(4):667-71. doi: 10.1681/ASN.2007101078. Epub 2008 Feb 20.

15.

A conditional knockout resource for the genome-wide study of mouse gene function.

Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V, Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs P, Fu J, Nefedov M, de Jong PJ, Stewart AF, Bradley A.

Nature. 2011 Jun 15;474(7351):337-42. doi: 10.1038/nature10163.

16.

A high-resolution anatomical atlas of the transcriptome in the mouse embryo.

Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, Nürnberger A, Schmidt K, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S, Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P, Reymond A, Davidson DR, Dollé P, Antonarakis SE, Yaspo ML, Martinez S, Baldock RA, Eichele G, Ballabio A.

PLoS Biol. 2011 Jan 18;9(1):e1000582. doi: 10.1371/journal.pbio.1000582.

17.

Antisense transcription in the mammalian transcriptome.

Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engström PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C; RIKEN Genome Exploration Research Group; Genome Science Group (Genome Network Project Core Group); FANTOM Consortium.

Science. 2005 Sep 2;309(5740):1564-6.

18.

High-efficiency full-length cDNA cloning.

Carninci P, Hayashizaki Y.

Methods Enzymol. 1999;303:19-44. No abstract available.

PMID:
10349636
19.

RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K, Togawa Y.

Genome Res. 2000 Nov;10(11):1757-71.

20.

Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M, Konno H, Okazaki Y, Muramatsu M, Hayashizaki Y.

Genome Res. 2000 Oct;10(10):1617-30.

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