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Items: 1 to 20 of 12636

1.

DCARS: Differential correlation across ranked samples.

Ghazanfar S, Strbenac D, Ormerod JT, Yang JYH, Patrick E.

Bioinformatics. 2018 Aug 9. doi: 10.1093/bioinformatics/bty698. [Epub ahead of print]

PMID:
30102408
2.

On Entropy and Information in Gene Interaction Networks.

Wallace ZS, Rosenthal SB, Fisch KM, Ideker T, Sasik R.

Bioinformatics. 2018 Aug 9. doi: 10.1093/bioinformatics/bty691. [Epub ahead of print]

PMID:
30102349
3.

isiKnock: in silico knockouts in signaling pathways.

Scheidel J, Giese H, Schweizer B, Amstein L, Ackermann J, Koch I.

Bioinformatics. 2018 Aug 9. doi: 10.1093/bioinformatics/bty700. [Epub ahead of print]

PMID:
30102342
4.

A quantitative map of protein sequence space for the cis-defensin superfamily.

Shafee T, Anderson M.

Bioinformatics. 2018 Aug 9. doi: 10.1093/bioinformatics/bty697. [Epub ahead of print]

PMID:
30102339
5.

CharGer: Clinical Characterization of Germline Variants.

Scott AD, Huang KL, Weerasinghe A, Mashl RJ, Gao Q, Martins Rodrigues F, Wyczalkowski M, Ding L.

Bioinformatics. 2018 Aug 9. doi: 10.1093/bioinformatics/bty649. [Epub ahead of print]

PMID:
30102335
6.

Cell membrane proteins with high N-glycosylation, high expression, and multiple interaction partners are preferred by mammalian viruses as receptors.

Zhang Z, Zhu Z, Chen W, Cai Z, Xu B, Tan Z, Wu A, Ge X, Guo X, Tan Z, Xia Z, Zhu H, Jiang T, Peng Y.

Bioinformatics. 2018 Aug 9. doi: 10.1093/bioinformatics/bty694. [Epub ahead of print]

PMID:
30102334
7.

Clustering of temporal gene expression data with mixtures of mixed effects models with a penalized likelihood.

Lu D, Tripodis Y, Gerstenfeld L, Demissie S.

Bioinformatics. 2018 Aug 8. doi: 10.1093/bioinformatics/bty696. [Epub ahead of print]

PMID:
30101356
8.

PrimedRPA: Primer design for Recombinase polymerase amplification assays.

Higgins M, Ravenhall M, Ward D, Phelan J, Ibrahim A, Forrest MS, Clark TG, Campino S.

Bioinformatics. 2018 Aug 8. doi: 10.1093/bioinformatics/bty701. [Epub ahead of print]

PMID:
30101342
9.

A powerful conditional gene-based association approach implicated functionally important genes for schizophrenia.

Li M, Jiang L, Mak TSH, Kwan JSH, Xue C, Chen P, Leung HC, Cui L, Li T, Sham PC.

Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty682. [Epub ahead of print]

PMID:
30101339
10.

LipidFinder on LIPID MAPS: peak filtering, MS searching and statistical analysis for lipidomics.

Fahy E, Alvarez-Jarreta J, Brasher CJ, Nguyen A, Hawksworth JI, Rodrigues P, Meckelmann S, Allen SM, O'Donnell VB.

Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty679. [Epub ahead of print]

PMID:
30101336
11.

MIPUP: Minimum perfect unmixed phylogenies for multi-sampled tumors via branchings and ILP.

Husic E, Li X, Hujdurovic A, Mehine M, Rizzi R, Mäkinen V, Milanic M, Tomescu AI.

Bioinformatics. 2018 Aug 8. doi: 10.1093/bioinformatics/bty683. [Epub ahead of print]

PMID:
30101335
12.

GlycanAnalyzer: Software for Automated Interpretation of N-Glycan Profiles after Exoglycosidase Digestions.

Walsh I, Nguyen-Khuong T, Wongtrakul-Kish K, Tay SJ, Chew D, Tasha J, Taron CH, Rudd PM.

Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty681. [Epub ahead of print]

PMID:
30101321
13.

Processing of big heterogeneous genomic datasets for tertiary analysis of Next Generation Sequencing data.

Masseroli M, Canakoglu A, Pinoli P, Kaitoua A, Gulino A, Horlova O, Nanni L, Bernasconi A, Perna S, Stamoulakatou E, Ceri S.

Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty688. [Epub ahead of print]

PMID:
30101316
14.

Linkage disequilibrium maps to guide contig ordering for genome assembly.

Pengelly RJ, Collins A.

Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty687. [Epub ahead of print]

PMID:
30101310
15.

Container-based bioinformatics with Pachyderm.

Novella JA, Khoonsari PE, Herman S, Whitenack D, Capuccini M, Burman J, Kultima K, Spjuth O.

Bioinformatics. 2018 Aug 8. doi: 10.1093/bioinformatics/bty699. [Epub ahead of print]

PMID:
30101309
16.

Global importance of RNA secondary structures in protein coding sequences.

Fricke M, Gerst R, Ibrahim B, Niepmann M, Marz M.

Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty678. [Epub ahead of print]

PMID:
30101307
17.

ASGART: fast and parallel genome scale segmental duplications mapping.

Delehelle F, Cussat-Blanc S, Alliot JM, Luga H, Balaresque P.

Bioinformatics. 2018 Aug 15;34(16):2708-2714. doi: 10.1093/bioinformatics/bty172.

PMID:
30101303
18.

Genetic Simulation Resources and the GSR Certification Program.

Peng B, Leong MC, Chen HS, Rotunno M, Brignole KR, Clarke J, Mechanic LE.

Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty666. [Epub ahead of print] No abstract available.

PMID:
30101297
19.

CABS-flex standalone: a simulation environment for fast modeling of protein flexibility.

Kurcinski M, Oleniecki T, Ciemny MP, Kuriata A, Kolinski A, Kmiecik S.

Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty685. [Epub ahead of print]

PMID:
30101282
20.

KEDDY: a knowledge-based statistical gene set test method to detect differential functional protein-protein interactions.

Jung S.

Bioinformatics. 2018 Aug 7. doi: 10.1093/bioinformatics/bty686. [Epub ahead of print]

PMID:
30101275

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