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Items: 1 to 20 of 1035

1.

ARIADNA: machine learning method for ancient DNA variant discovery.

Kawash JK, Smith SD, Karaiskos S, Grigoriev A.

DNA Res. 2018 Sep 11. doi: 10.1093/dnares/dsy029. [Epub ahead of print]

PMID:
30215675
2.

De novo transcriptome sequencing and metabolite profiling analyses reveal the complex metabolic genes involved in the terpenoid biosynthesis in Blue Anise Sage (Salvia guaranitica L.).

Ali M, Hussain RM, Rehman NU, She G, Li P, Wan X, Guo L, Zhao J.

DNA Res. 2018 Sep 4. doi: 10.1093/dnares/dsy028. [Epub ahead of print]

PMID:
30188980
3.

Comparative mitochondrial genomics reveals a possible role of a recent duplication of NADH dehydrogenase subunit 5 in gene regulation.

Li R, Ren X, Bi Y, Ding Q, Ho VWS, Zhao Z.

DNA Res. 2018 Aug 6. doi: 10.1093/dnares/dsy026. [Epub ahead of print]

PMID:
30085012
4.

Transcriptome-referenced association study of clove shape traits in garlic.

Chen X, Liu X, Zhu S, Tang S, Mei S, Chen J, Li S, Liu M, Gu Y, Dai Q, Liu T.

DNA Res. 2018 Aug 6. doi: 10.1093/dnares/dsy027. [Epub ahead of print]

PMID:
30084885
5.

Genome-wide comparative analysis in Solanaceous species reveals evolution of microRNAs targeting defense genes in Capsicum spp.

Seo E, Kim T, Park JH, Yeom SI, Kim S, Seo MK, Shin C, Choi D.

DNA Res. 2018 Jul 27. doi: 10.1093/dnares/dsy025. [Epub ahead of print]

PMID:
30060137
6.

Mobile elements contribute to the uniqueness of human genome with 15,000 human-specific insertions and 14 Mbp sequence increase.

Tang W, Mun S, Joshi A, Han K, Liang P.

DNA Res. 2018 Jul 19. doi: 10.1093/dnares/dsy022. [Epub ahead of print]

PMID:
30052927
7.

Design and evaluation of a sequence capture system for genome-wide SNP genotyping in highly heterozygous plant genomes: a case study with a keystone Neotropical hardwood tree genome.

Silva-Junior OB, Grattapaglia D, Novaes E, Collevatti RG.

DNA Res. 2018 Jul 17. doi: 10.1093/dnares/dsy023. [Epub ahead of print]

PMID:
30020434
8.

Genome-wide characterization of DNA methylation, small RNA expression, and histone H3 lysine nine di-methylation in Brassica rapa L.

Takahashi S, Osabe K, Fukushima N, Takuno S, Miyaji N, Shimizu M, Takasaki-Yasuda T, Suzuki Y, Dennis ES, Seki M, Fujimoto R.

DNA Res. 2018 Jun 29. doi: 10.1093/dnares/dsy021. [Epub ahead of print]

PMID:
29982343
9.

The genome of tapeworm Taenia multiceps sheds light on understanding parasitic mechanism and control of coenurosis disease.

Li W, Liu B, Yang Y, Ren Y, Wang S, Liu C, Zhang N, Qu Z, Yang W, Zhang Y, Yan H, Jiang F, Li L, Li S, Jia W, Yin H, Cai X, Liu T, McManus DP, Fan W, Fu B.

DNA Res. 2018 Jun 25. doi: 10.1093/dnares/dsy020. [Epub ahead of print]

PMID:
29947776
10.

The GntR family transcriptional regulator PMM1637 regulates the highly conserved cyanobacterial sRNA Yfr2 in marine picocyanobacteria.

Lambrecht SJ, Wahlig JML, Steglich C.

DNA Res. 2018 Jun 12. doi: 10.1093/dnares/dsy019. [Epub ahead of print]

PMID:
29901694
11.

Highly dense linkage maps from 31 full-sibling families of turbot (Scophthalmus maximus) provide insights into recombination patterns and chromosome rearrangements throughout a newly refined genome assembly.

Maroso F, Hermida M, Millán A, Blanco A, Saura M, Fernández A, Dalla Rovere G, Bargelloni L, Cabaleiro S, Villanueva B, Bouza C, Martínez P.

DNA Res. 2018 Aug 1;25(4):439-450. doi: 10.1093/dnares/dsy015.

12.

Optimization of single strand DNA incorporation reaction by Moloney murine leukaemia virus reverse transcriptase.

Ohtsubo Y, Sasaki H, Nagata Y, Tsuda M.

DNA Res. 2018 Jun 11. doi: 10.1093/dnares/dsy018. [Epub ahead of print]

PMID:
29897438
13.

Transposon-associated epigenetic silencing during Pleurotus ostreatus life cycle.

Borgognone A, Castanera R, Morselli M, López-Varas L, Rubbi L, Pisabarro AG, Pellegrini M, Ramírez L.

DNA Res. 2018 Jun 8. doi: 10.1093/dnares/dsy016. [Epub ahead of print]

PMID:
29893819
14.

Transcriptomic and functional analyses unveil the role of long non-coding RNAs in anthocyanin biosynthesis during sea buckthorn fruit ripening.

Zhang G, Chen D, Zhang T, Duan A, Zhang J, He C.

DNA Res. 2018 Jun 4. doi: 10.1093/dnares/dsy017. [Epub ahead of print]

PMID:
29873696
15.

A survey of transcriptome complexity in Sus scrofa using single-molecule long-read sequencing.

Li Y, Fang C, Fu Y, Hu A, Li C, Zou C, Li X, Zhao S, Zhang C, Li C.

DNA Res. 2018 Aug 1;25(4):421-437. doi: 10.1093/dnares/dsy014.

16.

Draft genome of a high value tropical timber tree, Teak (Tectona grandis L. f): insights into SSR diversity, phylogeny and conservation.

Yasodha R, Vasudeva R, Balakrishnan S, Sakthi AR, Abel N, Binai N, Rajashekar B, Bachpai VKW, Pillai C, Dev SA.

DNA Res. 2018 Aug 1;25(4):409-419. doi: 10.1093/dnares/dsy013.

17.

Detection of genome-edited cells by oligoribonucleotide interference-PCR.

Fujita T, Yuno M, Kitaura F, Fujii H.

DNA Res. 2018 Aug 1;25(4):395-407. doi: 10.1093/dnares/dsy012.

18.

Activation of σ20-dependent recombination and horizontal gene transfer in Mycoplasma genitalium.

Torres-Puig S, Martínez-Torró C, Granero-Moya I, Querol E, Piñol J, Pich OQ.

DNA Res. 2018 Aug 1;25(4):383-393. doi: 10.1093/dnares/dsy011.

19.

A new approach for comprehensively describing heterogametic sex chromosomes.

Li S, Ajimura M, Chen Z, Liu J, Chen E, Guo H, Tadapatri V, Reddy CG, Zhang J, Kishino H, Abe H, Xia Q, Arunkumar KP, Mita K.

DNA Res. 2018 Aug 1;25(4):375-382. doi: 10.1093/dnares/dsy010.

20.

Unravelling the epigenomic interactions between parental inbreds resulting in an altered hybrid methylome in pigeonpea.

Junaid A, Kumar H, Rao AR, Patil AN, Singh NK, Gaikwad K.

DNA Res. 2018 Aug 1;25(4):361-373. doi: 10.1093/dnares/dsy008.

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