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Items: 1 to 20 of 180

1.

On reliable discovery of molecular signatures.

Nilsson R, Björkegren J, Tegnér J.

BMC Bioinformatics. 2009 Jan 29;10:38. doi: 10.1186/1471-2105-10-38.

2.

ExactFDR: exact computation of false discovery rate estimate in case-control association studies.

Wojcik J, Forner K.

Bioinformatics. 2008 Oct 15;24(20):2407-8. doi: 10.1093/bioinformatics/btn379. Epub 2008 Jul 28.

PMID:
18662924
3.

Robust estimation of the false discovery rate.

Pounds S, Cheng C.

Bioinformatics. 2006 Aug 15;22(16):1979-87. Epub 2006 Jun 15.

PMID:
16777905
4.
5.

Sample size determination for the false discovery rate.

Pounds S, Cheng C.

Bioinformatics. 2005 Dec 1;21(23):4263-71. Epub 2005 Oct 4. Erratum in: Bioinformatics. 2009 Mar 1;25(5):698-9.

PMID:
16204346
6.

Quick calculation for sample size while controlling false discovery rate with application to microarray analysis.

Liu P, Hwang JT.

Bioinformatics. 2007 Mar 15;23(6):739-46. Epub 2007 Jan 19. Erratum in: Bioinformatics. 2008 Jan 1;24(1):149.

PMID:
17237060
7.

Finding co-mutated genes and candidate cancer genes in cancer genomes by stratified false discovery rate control.

Wang J, Zhang Y, Shen X, Zhu J, Zhang L, Zou J, Guo Z.

Mol Biosyst. 2011 Apr;7(4):1158-66. doi: 10.1039/c0mb00211a. Epub 2011 Jan 28.

PMID:
21279201
8.

Estimation of false discovery proportion under general dependence.

Pawitan Y, Calza S, Ploner A.

Bioinformatics. 2006 Dec 15;22(24):3025-31. Epub 2006 Oct 17.

PMID:
17046978
10.
11.

Universal false discovery rate estimation methodology for genome-wide association studies.

Forner K, Lamarine M, Guedj M, Dauvillier J, Wojcik J.

Hum Hered. 2008;65(4):183-94. Epub 2007 Dec 11.

PMID:
18073488
12.

Potential bias in GO::TermFinder.

Flight RM, Wentzell PD.

Brief Bioinform. 2009 May;10(3):289-94. doi: 10.1093/bib/bbn054. Epub 2009 Mar 11.

PMID:
19279157
13.
14.
15.

Mining gene expression profiles: expression signatures as cancer phenotypes.

Nevins JR, Potti A.

Nat Rev Genet. 2007 Aug;8(8):601-9. Epub 2007 Jul 3. Review.

PMID:
17607306
16.

FUNC: a package for detecting significant associations between gene sets and ontological annotations.

Prüfer K, Muetzel B, Do HH, Weiss G, Khaitovich P, Rahm E, Pääbo S, Lachmann M, Enard W.

BMC Bioinformatics. 2007 Feb 6;8:41.

17.

"Omics" data and levels of evidence for biomarker discovery.

Ghosh D, Poisson LM.

Genomics. 2009 Jan;93(1):13-6. doi: 10.1016/j.ygeno.2008.07.006. Epub 2008 Sep 14. Review.

18.
19.

FDR-controlling testing procedures and sample size determination for microarrays.

Li SS, Bigler J, Lampe JW, Potter JD, Feng Z.

Stat Med. 2005 Aug 15;24(15):2267-80.

PMID:
15977294
20.

Comments on 'On correcting the overestimation of the permutation-based false discovery rate estimator'.

Xie Y.

Bioinformatics. 2008 Oct 15;24(20):2420. doi: 10.1093/bioinformatics/btn456. Epub 2008 Sep 1. No abstract available.

PMID:
18762484

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