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Items: 1 to 20 of 204

1.

Structural mechanism for coordination of proofreading and polymerase activities in archaeal DNA polymerases.

Kuroita T, Matsumura H, Yokota N, Kitabayashi M, Hashimoto H, Inoue T, Imanaka T, Kai Y.

J Mol Biol. 2005 Aug 12;351(2):291-8.

PMID:
16019029
2.

Crystal structure of a pol alpha family DNA polymerase from the hyperthermophilic archaeon Thermococcus sp. 9 degrees N-7.

Rodriguez AC, Park HW, Mao C, Beese LS.

J Mol Biol. 2000 Jun 2;299(2):447-62.

PMID:
10860752
3.

Crystal structure of DNA polymerase from hyperthermophilic archaeon Pyrococcus kodakaraensis KOD1.

Hashimoto H, Nishioka M, Fujiwara S, Takagi M, Imanaka T, Inoue T, Kai Y.

J Mol Biol. 2001 Feb 23;306(3):469-77.

PMID:
11178906
4.

Crystal structure of Pfu, the high fidelity DNA polymerase from Pyrococcus furiosus.

Kim SW, Kim DU, Kim JK, Kang LW, Cho HS.

Int J Biol Macromol. 2008 May 1;42(4):356-61. doi: 10.1016/j.ijbiomac.2008.01.010. Epub 2008 Feb 12.

PMID:
18355915
5.

Long and accurate PCR with a mixture of KOD DNA polymerase and its exonuclease deficient mutant enzyme.

Nishioka M, Mizuguchi H, Fujiwara S, Komatsubara S, Kitabayashi M, Uemura H, Takagi M, Imanaka T.

J Biotechnol. 2001 Jun 15;88(2):141-9.

PMID:
11403848
6.

Characterization of the 3' exonuclease subunit DP1 of Methanococcus jannaschii replicative DNA polymerase D.

Jokela M, Eskelinen A, Pospiech H, Rouvinen J, Syväoja JE.

Nucleic Acids Res. 2004 Apr 30;32(8):2430-40. Print 2004.

7.

Investigating the role of the little finger domain of Y-family DNA polymerases in low fidelity synthesis and translesion replication.

Boudsocq F, Kokoska RJ, Plosky BS, Vaisman A, Ling H, Kunkel TA, Yang W, Woodgate R.

J Biol Chem. 2004 Jul 30;279(31):32932-40. Epub 2004 May 21.

8.

Sensing domain and extension rate of a family B-type DNA polymerase determine the stalling at a deaminated base.

Kim YJ, Cha SS, Lee HS, Ryu YG, Bae SS, Cho Y, Cho HS, Kim SJ, Kwon ST, Lee JH, Kang SG.

J Microbiol Biotechnol. 2008 Aug;18(8):1377-85.

9.

Chimeric thermostable DNA polymerases with reverse transcriptase and attenuated 3'-5' exonuclease activity.

Schönbrunner NJ, Fiss EH, Budker O, Stoffel S, Sigua CL, Gelfand DH, Myers TW.

Biochemistry. 2006 Oct 24;45(42):12786-95.

PMID:
17042497
10.

Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1.

Matsumura H, Takahashi H, Inoue T, Yamamoto T, Hashimoto H, Nishioka M, Fujiwara S, Takagi M, Imanaka T, Kai Y.

Proteins. 2006 May 15;63(3):711-5. No abstract available.

PMID:
16493661
12.

Characterization of DNA polymerase from Pyrococcus sp. strain KOD1 and its application to PCR.

Takagi M, Nishioka M, Kakihara H, Kitabayashi M, Inoue H, Kawakami B, Oka M, Imanaka T.

Appl Environ Microbiol. 1997 Nov;63(11):4504-10.

13.

Compartmentalized self-replication (CSR) selection of Thermococcus litoralis Sh1B DNA polymerase for diminished uracil binding.

Tubeleviciute A, Skirgaila R.

Protein Eng Des Sel. 2010 Aug;23(8):589-97. doi: 10.1093/protein/gzq032. Epub 2010 May 31.

PMID:
20513707
14.

Cloning, purification, and characterization of a new DNA polymerase from a hyperthermophilic archaeon, Thermococcus sp. NA1.

Kim YJ, Lee HS, Bae SS, Jeon JH, Lim JK, Cho Y, Nam KH, Kang SG, Kim SJ, Kwon ST, Lee JH.

J Microbiol Biotechnol. 2007 Jul;17(7):1090-7.

15.

Portraits of a Y-family DNA polymerase.

Yang W.

FEBS Lett. 2005 Feb 7;579(4):868-72. Review.

16.

Crystallization and preliminary diffraction analysis of a hyperthermostable DNA polymerase from a Thermococcus archaeon.

Zhou M, Mao C, Rodriguez AC, Kiefer JR, Kucera RB, Beese LS.

Acta Crystallogr D Biol Crystallogr. 1998 Sep 1;54(Pt 5):994-5.

PMID:
9757117
17.

Crystal structure of a subtilisin homologue, Tk-SP, from Thermococcus kodakaraensis: requirement of a C-terminal beta-jelly roll domain for hyperstability.

Foophow T, Tanaka S, Angkawidjaja C, Koga Y, Takano K, Kanaya S.

J Mol Biol. 2010 Jul 23;400(4):865-77. doi: 10.1016/j.jmb.2010.05.064. Epub 2010 Jun 1.

PMID:
20595040
18.

Structure of Escherichia coli exonuclease I suggests how processivity is achieved.

Breyer WA, Matthews BW.

Nat Struct Biol. 2000 Dec;7(12):1125-8.

PMID:
11101894
19.

Crystal structure and functional implications of Pyrococcus furiosus hef helicase domain involved in branched DNA processing.

Nishino T, Komori K, Tsuchiya D, Ishino Y, Morikawa K.

Structure. 2005 Jan;13(1):143-53.

20.

Cloning, expression, and PCR application of DNA polymerase from the hyperthermophilic archaeon, Thermococcus celer.

Kim KP, Bae H, Kim IH, Kwon ST.

Biotechnol Lett. 2011 Feb;33(2):339-46. doi: 10.1007/s10529-010-0434-2. Epub 2010 Oct 16.

PMID:
20953664

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