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Items: 8

1.

Distinct Roles for Condensin's Two ATPase Sites in Chromosome Condensation.

Elbatsh AMO, Kim E, Eeftens JM, Raaijmakers JA, van der Weide RH, García-Nieto A, Bravo S, Ganji M, Uit de Bos J, Teunissen H, Medema RH, de Wit E, Haering CH, Dekker C, Rowland BD.

Mol Cell. 2019 Dec 5;76(5):724-737.e5. doi: 10.1016/j.molcel.2019.09.020. Epub 2019 Oct 16.

2.

The ChAHP Complex Counteracts Chromatin Looping at CTCF Sites that Emerged from SINE Expansions in Mouse.

Kaaij LJT, Mohn F, van der Weide RH, de Wit E, Bühler M.

Cell. 2019 Sep 5;178(6):1437-1451.e14. doi: 10.1016/j.cell.2019.08.007.

PMID:
31491387
3.

High-throughput identification of human SNPs affecting regulatory element activity.

van Arensbergen J, Pagie L, FitzPatrick VD, de Haas M, Baltissen MP, Comoglio F, van der Weide RH, Teunissen H, Võsa U, Franke L, de Wit E, Vermeulen M, Bussemaker HJ, van Steensel B.

Nat Genet. 2019 Jul;51(7):1160-1169. doi: 10.1038/s41588-019-0455-2. Epub 2019 Jun 28.

PMID:
31253979
4.

Developing landscapes: genome architecture during early embryogenesis.

van der Weide RH, de Wit E.

Curr Opin Genet Dev. 2019 Apr;55:39-45. doi: 10.1016/j.gde.2019.04.009. Epub 2019 May 18. Review.

PMID:
31112906
5.

Systemic Loss and Gain of Chromatin Architecture throughout Zebrafish Development.

Kaaij LJT, van der Weide RH, Ketting RF, de Wit E.

Cell Rep. 2018 Jul 3;24(1):1-10.e4. doi: 10.1016/j.celrep.2018.06.003.

6.

The Cohesin Release Factor WAPL Restricts Chromatin Loop Extension.

Haarhuis JHI, van der Weide RH, Blomen VA, Yáñez-Cuna JO, Amendola M, van Ruiten MS, Krijger PHL, Teunissen H, Medema RH, van Steensel B, Brummelkamp TR, de Wit E, Rowland BD.

Cell. 2017 May 4;169(4):693-707.e14. doi: 10.1016/j.cell.2017.04.013.

7.

The Genomic Scrapheap Challenge; Extracting Relevant Data from Unmapped Whole Genome Sequencing Reads, Including Strain Specific Genomic Segments, in Rats.

van der Weide RH, Simonis M, Hermsen R, Toonen P, Cuppen E, de Ligt J.

PLoS One. 2016 Aug 8;11(8):e0160036. doi: 10.1371/journal.pone.0160036. eCollection 2016.

8.

Genomic landscape of rat strain and substrain variation.

Hermsen R, de Ligt J, Spee W, Blokzijl F, Schäfer S, Adami E, Boymans S, Flink S, van Boxtel R, van der Weide RH, Aitman T, Hübner N, Simonis M, Tabakoff B, Guryev V, Cuppen E.

BMC Genomics. 2015 May 6;16:357. doi: 10.1186/s12864-015-1594-1.

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