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Items: 1 to 50 of 64

1.

Membrane trafficking as an active regulator of constitutively secreted cytokines.

Revelo NH, Ter Beest M, van den Bogaart G.

J Cell Sci. 2019 Oct 10;133(5). pii: jcs234781. doi: 10.1242/jcs.234781. Review.

PMID:
31601617
2.

Radical Stress Is More Cytotoxic in the Nucleus than in Other Organelles.

Paardekooper LM, van Vroonhoven E, Ter Beest M, van den Bogaart G.

Int J Mol Sci. 2019 Aug 25;20(17). pii: E4147. doi: 10.3390/ijms20174147.

3.

Stx5-Mediated ER-Golgi Transport in Mammals and Yeast.

Linders PT, Horst CV, Beest MT, van den Bogaart G.

Cells. 2019 Jul 26;8(8). pii: E780. doi: 10.3390/cells8080780. Review.

4.

Chasing Uptake: Super-Resolution Microscopy in Endocytosis and Phagocytosis.

Baranov MV, Olea RA, van den Bogaart G.

Trends Cell Biol. 2019 Sep;29(9):727-739. doi: 10.1016/j.tcb.2019.05.006. Epub 2019 Jun 18. Review.

PMID:
31227311
5.

Human Monocyte-Derived Dendritic Cells Produce Millimolar Concentrations of ROS in Phagosomes Per Second.

Paardekooper LM, Dingjan I, Linders PTA, Staal AHJ, Cristescu SM, Verberk WCEP, van den Bogaart G.

Front Immunol. 2019 May 29;10:1216. doi: 10.3389/fimmu.2019.01216. eCollection 2019.

6.

Oxygen in the tumor microenvironment: effects on dendritic cell function.

Paardekooper LM, Vos W, van den Bogaart G.

Oncotarget. 2019 Jan 25;10(8):883-896. doi: 10.18632/oncotarget.26608. eCollection 2019 Jan 25. Review.

7.

The Phosphoinositide Kinase PIKfyve Promotes Cathepsin-S-Mediated Major Histocompatibility Complex Class II Antigen Presentation.

Baranov MV, Bianchi F, Schirmacher A, van Aart MAC, Maassen S, Muntjewerff EM, Dingjan I, Ter Beest M, Verdoes M, Keyser SGL, Bertozzi CR, Diederichsen U, van den Bogaart G.

iScience. 2019 Jan 25;11:160-177. doi: 10.1016/j.isci.2018.12.015. Epub 2018 Dec 20.

8.

Catestatin regulates vesicular quanta through modulation of cholinergic and peptidergic (PACAPergic) stimulation in PC12 cells.

Sahu BS, Mahata S, Bandyopadhyay K, Mahata M, Avolio E, Pasqua T, Sahu C, Bandyopadhyay GK, Bartolomucci A, Webster NJG, Van Den Bogaart G, Fischer-Colbrie R, Corti A, Eiden LE, Mahata SK.

Cell Tissue Res. 2019 Apr;376(1):51-70. doi: 10.1007/s00441-018-2956-1. Epub 2018 Nov 22.

PMID:
30467710
9.

Hypoxia potentiates monocyte-derived dendritic cells for release of tumor necrosis factor α via MAP3K8.

Paardekooper LM, Bendix MB, Ottria A, de Haer LW, Ter Beest M, Radstake TRDJ, Marut W, van den Bogaart G.

Biosci Rep. 2018 Dec 14;38(6). pii: BSR20182019. doi: 10.1042/BSR20182019. Print 2018 Dec 21.

10.

Catestatin as a Target for Treatment of Inflammatory Diseases.

Muntjewerff EM, Dunkel G, Nicolasen MJT, Mahata SK, van den Bogaart G.

Front Immunol. 2018 Oct 4;9:2199. doi: 10.3389/fimmu.2018.02199. eCollection 2018. Review.

11.

Interleukin-6 secretion is limited by self-signaling in endosomes.

Verboogen DRJ, Revelo NH, Ter Beest M, van den Bogaart G.

J Mol Cell Biol. 2019 Feb 1;11(2):144-157. doi: 10.1093/jmcb/mjy038.

12.

Integrating glycomics and genomics uncovers SLC10A7 as essential factor for bone mineralization by regulating post-Golgi protein transport and glycosylation.

Ashikov A, Abu Bakar N, Wen XY, Niemeijer M, Rodrigues Pinto Osorio G, Brand-Arzamendi K, Hasadsri L, Hansikova H, Raymond K, Vicogne D, Ondruskova N, Simon MEH, Pfundt R, Timal S, Beumers R, Biot C, Smeets R, Kersten M, Huijben K; CDG group, Linders PTA, van den Bogaart G, van Hijum SAFT, Rodenburg R, van den Heuvel LP, van Spronsen F, Honzik T, Foulquier F, van Scherpenzeel M, Lefeber DJ; CDG group, Mirjam W, Han B, Helen M, Helen M, Peter VH, Jiddeke VK, Diego M, Lars M, Katja BH, Jozef H, Majid A, Kevin C, Johann TWN.

Hum Mol Genet. 2018 Sep 1;27(17):3029-3045. doi: 10.1093/hmg/ddy213.

PMID:
29878199
13.

Endosomal and Phagosomal SNAREs.

Dingjan I, Linders PTA, Verboogen DRJ, Revelo NH, Ter Beest M, van den Bogaart G.

Physiol Rev. 2018 Jul 1;98(3):1465-1492. doi: 10.1152/physrev.00037.2017. Review.

14.

Secretory vesicles of immune cells contain only a limited number of interleukin 6 molecules.

Verboogen DRJ, Ter Beest M, Honigmann A, van den Bogaart G.

FEBS Lett. 2018 May;592(9):1535-1544. doi: 10.1002/1873-3468.13036. Epub 2018 Apr 1.

15.

Visualizing Intracellular SNARE Trafficking by Fluorescence Lifetime Imaging Microscopy.

Verboogen DRJ, Baranov MV, Ter Beest M, van den Bogaart G.

J Vis Exp. 2017 Dec 29;(130). doi: 10.3791/56745.

16.

Transmembrane Helices Are an Overlooked Source of Major Histocompatibility Complex Class I Epitopes.

Bianchi F, Textor J, van den Bogaart G.

Front Immunol. 2017 Sep 11;8:1118. doi: 10.3389/fimmu.2017.01118. eCollection 2017.

17.

Ethylene, an early marker of systemic inflammation in humans.

Paardekooper LM, van den Bogaart G, Kox M, Dingjan I, Neerincx AH, Bendix MB, Beest MT, Harren FJM, Risby T, Pickkers P, Marczin N, Cristescu SM.

Sci Rep. 2017 Jul 31;7(1):6889. doi: 10.1038/s41598-017-05930-9.

18.

VAMP8-mediated NOX2 recruitment to endosomes is necessary for antigen release.

Dingjan I, Paardekooper LM, Verboogen DRJ, von Mollard GF, Ter Beest M, van den Bogaart G.

Eur J Cell Biol. 2017 Oct;96(7):705-714. doi: 10.1016/j.ejcb.2017.06.007. Epub 2017 Jun 23.

19.

Fluorescence Lifetime Imaging Microscopy reveals rerouting of SNARE trafficking driving dendritic cell activation.

Verboogen DRJ, González Mancha N, Ter Beest M, van den Bogaart G.

Elife. 2017 May 19;6. pii: e23525. doi: 10.7554/eLife.23525.

20.

SWAP70 is a universal GEF-like adaptor for tethering actin to phagosomes.

Baranov MV, Revelo NH, Verboogen DRJ, Ter Beest M, van den Bogaart G.

Small GTPases. 2019 Jul;10(4):311-323. doi: 10.1080/21541248.2017.1328302. Epub 2018 Feb 9.

21.

Tetraspanin microdomains control localized protein kinase C signaling in B cells.

Zuidscherwoude M, Dunlock VE, van den Bogaart G, van Deventer SJ, van der Schaaf A, van Oostrum J, Goedhart J, In 't Hout J, Hämmerling GJ, Tanaka S, Nadler A, Schultz C, Wright MD, Adjobo-Hermans MJW, van Spriel AB.

Sci Signal. 2017 May 9;10(478). pii: eaag2755. doi: 10.1126/scisignal.aag2755.

PMID:
28487417
22.

Oxidized phagosomal NOX2 complex is replenished from lysosomes.

Dingjan I, Linders PT, van den Bekerom L, Baranov MV, Halder P, Ter Beest M, van den Bogaart G.

J Cell Sci. 2017 Apr 1;130(7):1285-1298. doi: 10.1242/jcs.196931. Epub 2017 Feb 15.

23.

SWAP70 Organizes the Actin Cytoskeleton and Is Essential for Phagocytosis.

Baranov MV, Revelo NH, Dingjan I, Maraspini R, Ter Beest M, Honigmann A, van den Bogaart G.

Cell Rep. 2016 Nov 1;17(6):1518-1531. doi: 10.1016/j.celrep.2016.10.021.

24.

Single-vesicle imaging reveals different transport mechanisms between glutamatergic and GABAergic vesicles.

Farsi Z, Preobraschenski J, van den Bogaart G, Riedel D, Jahn R, Woehler A.

Science. 2016 Feb 26;351(6276):981-4. doi: 10.1126/science.aad8142. Epub 2016 Feb 11.

25.

Lipid peroxidation causes endosomal antigen release for cross-presentation.

Dingjan I, Verboogen DR, Paardekooper LM, Revelo NH, Sittig SP, Visser LJ, Mollard GF, Henriet SS, Figdor CG, Ter Beest M, van den Bogaart G.

Sci Rep. 2016 Feb 24;6:22064. doi: 10.1038/srep22064.

26.

Calcium Promotes the Formation of Syntaxin 1 Mesoscale Domains through Phosphatidylinositol 4,5-Bisphosphate.

Milovanovic D, Platen M, Junius M, Diederichsen U, Schaap IA, Honigmann A, Jahn R, van den Bogaart G.

J Biol Chem. 2016 Apr 8;291(15):7868-76. doi: 10.1074/jbc.M116.716225. Epub 2016 Feb 16.

27.

CCDC115 Deficiency Causes a Disorder of Golgi Homeostasis with Abnormal Protein Glycosylation.

Jansen JC, Cirak S, van Scherpenzeel M, Timal S, Reunert J, Rust S, Pérez B, Vicogne D, Krawitz P, Wada Y, Ashikov A, Pérez-Cerdá C, Medrano C, Arnoldy A, Hoischen A, Huijben K, Steenbergen G, Quelhas D, Diogo L, Rymen D, Jaeken J, Guffon N, Cheillan D, van den Heuvel LP, Maeda Y, Kaiser O, Schara U, Gerner P, van den Boogert MA, Holleboom AG, Nassogne MC, Sokal E, Salomon J, van den Bogaart G, Drenth JP, Huynen MA, Veltman JA, Wevers RA, Morava E, Matthijs G, Foulquier F, Marquardt T, Lefeber DJ.

Am J Hum Genet. 2016 Feb 4;98(2):310-21. doi: 10.1016/j.ajhg.2015.12.010. Epub 2016 Jan 28.

28.

TMEM199 Deficiency Is a Disorder of Golgi Homeostasis Characterized by Elevated Aminotransferases, Alkaline Phosphatase, and Cholesterol and Abnormal Glycosylation.

Jansen JC, Timal S, van Scherpenzeel M, Michelakakis H, Vicogne D, Ashikov A, Moraitou M, Hoischen A, Huijben K, Steenbergen G, van den Boogert MA, Porta F, Calvo PL, Mavrikou M, Cenacchi G, van den Bogaart G, Salomon J, Holleboom AG, Rodenburg RJ, Drenth JP, Huynen MA, Wevers RA, Morava E, Foulquier F, Veltman JA, Lefeber DJ.

Am J Hum Genet. 2016 Feb 4;98(2):322-30. doi: 10.1016/j.ajhg.2015.12.011. Epub 2016 Jan 28.

29.

The dendritic cell side of the immunological synapse.

Verboogen DR, Dingjan I, Revelo NH, Visser LJ, ter Beest M, van den Bogaart G.

Biomol Concepts. 2016 Feb;7(1):17-28. doi: 10.1515/bmc-2015-0028. Review.

PMID:
26741354
30.

The tetraspanin web revisited by super-resolution microscopy.

Zuidscherwoude M, Göttfert F, Dunlock VM, Figdor CG, van den Bogaart G, van Spriel AB.

Sci Rep. 2015 Jul 17;5:12201. doi: 10.1038/srep12201.

31.

Editorial: Membrane domains as new drug targets.

van Spriel AB, van den Bogaart G, Cambi A.

Front Physiol. 2015 Jun 2;6:172. doi: 10.3389/fphys.2015.00172. eCollection 2015. No abstract available.

32.

Hydrophobic mismatch sorts SNARE proteins into distinct membrane domains.

Milovanovic D, Honigmann A, Koike S, Göttfert F, Pähler G, Junius M, Müllar S, Diederichsen U, Janshoff A, Grubmüller H, Risselada HJ, Eggeling C, Hell SW, van den Bogaart G, Jahn R.

Nat Commun. 2015 Jan 30;6:5984. doi: 10.1038/ncomms6984.

33.

Reaching for far-flung antigen: How solid-core podosomes of dendritic cells transform into protrusive structures.

Baranov MV, Ter Beest M, van den Bogaart G.

Commun Integr Biol. 2014 Nov 11;7(5). doi: 10.4161/cib.29084. eCollection 2014 Oct.

34.

Podosomes of dendritic cells facilitate antigen sampling.

Baranov M, Ter Beest M, Reinieren-Beeren I, Cambi A, Figdor CG, van den Bogaart G.

J Cell Sci. 2014 Mar 1;127(Pt 5):1052-1064. doi: 10.1242/jcs.141226. Epub 2014 Jan 14.

35.

Microdomains of SNARE proteins in the plasma membrane.

van den Bogaart G, Lang T, Jahn R.

Curr Top Membr. 2013;72:193-230. doi: 10.1016/B978-0-12-417027-8.00006-4.

PMID:
24210431
36.

Phosphatidylinositol 4,5-bisphosphate clusters act as molecular beacons for vesicle recruitment.

Honigmann A, van den Bogaart G, Iraheta E, Risselada HJ, Milovanovic D, Mueller V, Müllar S, Diederichsen U, Fasshauer D, Grubmüller H, Hell SW, Eggeling C, Kühnel K, Jahn R.

Nat Struct Mol Biol. 2013 Jun;20(6):679-86. doi: 10.1038/nsmb.2570. Epub 2013 May 12.

37.

Synaptic PI(3,4,5)P3 is required for Syntaxin1A clustering and neurotransmitter release.

Khuong TM, Habets RL, Kuenen S, Witkowska A, Kasprowicz J, Swerts J, Jahn R, van den Bogaart G, Verstreken P.

Neuron. 2013 Mar 20;77(6):1097-108. doi: 10.1016/j.neuron.2013.01.025.

38.

Microscale thermophoresis quantifies biomolecular interactions under previously challenging conditions.

Seidel SA, Dijkman PM, Lea WA, van den Bogaart G, Jerabek-Willemsen M, Lazic A, Joseph JS, Srinivasan P, Baaske P, Simeonov A, Katritch I, Melo FA, Ladbury JE, Schreiber G, Watts A, Braun D, Duhr S.

Methods. 2013 Mar;59(3):301-15. doi: 10.1016/j.ymeth.2012.12.005. Epub 2012 Dec 24. Review.

39.

LRRK2 controls an EndoA phosphorylation cycle in synaptic endocytosis.

Matta S, Van Kolen K, da Cunha R, van den Bogaart G, Mandemakers W, Miskiewicz K, De Bock PJ, Morais VA, Vilain S, Haddad D, Delbroek L, Swerts J, Chávez-Gutiérrez L, Esposito G, Daneels G, Karran E, Holt M, Gevaert K, Moechars DW, De Strooper B, Verstreken P.

Neuron. 2012 Sep 20;75(6):1008-21. doi: 10.1016/j.neuron.2012.08.022.

40.

Controlling synaptotagmin activity by electrostatic screening.

Park Y, Hernandez JM, van den Bogaart G, Ahmed S, Holt M, Riedel D, Jahn R.

Nat Struct Mol Biol. 2012 Oct;19(10):991-7. doi: 10.1038/nsmb.2375. Epub 2012 Sep 2.

41.

Cis- and trans-membrane interactions of synaptotagmin-1.

Vennekate W, Schröder S, Lin CC, van den Bogaart G, Grunwald M, Jahn R, Walla PJ.

Proc Natl Acad Sci U S A. 2012 Jul 3;109(27):11037-42. doi: 10.1073/pnas.1116326109. Epub 2012 Jun 18.

42.

Phosphatidylinositol 4,5-bisphosphate increases Ca2+ affinity of synaptotagmin-1 by 40-fold.

van den Bogaart G, Meyenberg K, Diederichsen U, Jahn R.

J Biol Chem. 2012 May 11;287(20):16447-53. doi: 10.1074/jbc.M112.343418. Epub 2012 Mar 23.

43.

Membrane protein sequestering by ionic protein-lipid interactions.

van den Bogaart G, Meyenberg K, Risselada HJ, Amin H, Willig KI, Hubrich BE, Dier M, Hell SW, Grubmüller H, Diederichsen U, Jahn R.

Nature. 2011 Oct 23;479(7374):552-5. doi: 10.1038/nature10545.

44.

Evaluation of pulsed-FRAP and conventional-FRAP for determination of protein mobility in prokaryotic cells.

Mika JT, Krasnikov V, van den Bogaart G, de Haan F, Poolman B.

PLoS One. 2011;6(9):e25664. doi: 10.1371/journal.pone.0025664. Epub 2011 Sep 28.

45.

SNARE derived peptide mimic inducing membrane fusion.

Meyenberg K, Lygina AS, van den Bogaart G, Jahn R, Diederichsen U.

Chem Commun (Camb). 2011 Sep 7;47(33):9405-7. doi: 10.1039/c1cc12879e. Epub 2011 Jul 20.

PMID:
21773636
46.

Inside insight to membrane fusion.

van den Bogaart G, Jahn R.

Proc Natl Acad Sci U S A. 2011 Jul 19;108(29):11729-30. doi: 10.1073/pnas.1108770108. Epub 2011 Jul 7. No abstract available.

47.

Long unfolded linkers facilitate membrane protein import through the nuclear pore complex.

Meinema AC, Laba JK, Hapsari RA, Otten R, Mulder FA, Kralt A, van den Bogaart G, Lusk CP, Poolman B, Veenhoff LM.

Science. 2011 Jul 1;333(6038):90-3. doi: 10.1126/science.1205741. Epub 2011 Jun 9.

48.

Synaptotagmin-1 may be a distance regulator acting upstream of SNARE nucleation.

van den Bogaart G, Thutupalli S, Risselada JH, Meyenberg K, Holt M, Riedel D, Diederichsen U, Herminghaus S, Grubmüller H, Jahn R.

Nat Struct Mol Biol. 2011 Jun 5;18(7):805-12. doi: 10.1038/nsmb.2061.

49.

Counting the SNAREs needed for membrane fusion.

van den Bogaart G, Jahn R.

J Mol Cell Biol. 2011 Aug;3(4):204-5. doi: 10.1093/jmcb/mjr004. Epub 2011 Apr 26.

PMID:
21525018
50.

Quaternary structure of SecA in solution and bound to SecYEG probed at the single molecule level.

Kusters I, van den Bogaart G, Kedrov A, Krasnikov V, Fulyani F, Poolman B, Driessen AJ.

Structure. 2011 Mar 9;19(3):430-9. doi: 10.1016/j.str.2010.12.016.

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