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Items: 10

1.

Stem Cell Proliferation Is Kept in Check by the Chromatin Regulators Kismet/CHD7/CHD8 and Trr/MLL3/4.

Gervais L, van den Beek M, Josserand M, Sallé J, Stefanutti M, Perdigoto CN, Skorski P, Mazouni K, Marshall OJ, Brand AH, Schweisguth F, Bardin AJ.

Dev Cell. 2019 May 20;49(4):556-573.e6. doi: 10.1016/j.devcel.2019.04.033.

2.

Dual-layer transposon repression in heads of Drosophila melanogaster.

van den Beek M, da Silva B, Pouch J, Ali Chaouche MEA, Carré C, Antoniewski C.

RNA. 2018 Dec;24(12):1749-1760. doi: 10.1261/rna.067173.118. Epub 2018 Sep 14.

3.

Practical Computational Reproducibility in the Life Sciences.

Grüning B, Chilton J, Köster J, Dale R, Soranzo N, van den Beek M, Goecks J, Backofen R, Nekrutenko A, Taylor J.

Cell Syst. 2018 Jun 27;6(6):631-635. doi: 10.1016/j.cels.2018.03.014.

4.

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update.

Afgan E, Baker D, Batut B, van den Beek M, Bouvier D, Cech M, Chilton J, Clements D, Coraor N, Grüning BA, Guerler A, Hillman-Jackson J, Hiltemann S, Jalili V, Rasche H, Soranzo N, Goecks J, Taylor J, Nekrutenko A, Blankenberg D.

Nucleic Acids Res. 2018 Jul 2;46(W1):W537-W544. doi: 10.1093/nar/gky379.

5.

ReGaTE: Registration of Galaxy Tools in Elixir.

Doppelt-Azeroual O, Mareuil F, Deveaud E, Kalaš M, Soranzo N, van den Beek M, Grüning B, Ison J, Ménager H.

Gigascience. 2017 Jun 1;6(6):1-4. doi: 10.1093/gigascience/gix022.

6.

Metavisitor, a Suite of Galaxy Tools for Simple and Rapid Detection and Discovery of Viruses in Deep Sequence Data.

Carissimo G, van den Beek M, Vernick KD, Antoniewski C.

PLoS One. 2017 Jan 3;12(1):e0168397. doi: 10.1371/journal.pone.0168397. eCollection 2017.

7.

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update.

Afgan E, Baker D, van den Beek M, Blankenberg D, Bouvier D, Čech M, Chilton J, Clements D, Coraor N, Eberhard C, Grüning B, Guerler A, Hillman-Jackson J, Von Kuster G, Rasche E, Soranzo N, Turaga N, Taylor J, Nekrutenko A, Goecks J.

Nucleic Acids Res. 2016 Jul 8;44(W1):W3-W10. doi: 10.1093/nar/gkw343. Epub 2016 May 2.

8.

Paramutation in Drosophila Requires Both Nuclear and Cytoplasmic Actors of the piRNA Pathway and Induces Cis-spreading of piRNA Production.

Hermant C, Boivin A, Teysset L, Delmarre V, Asif-Laidin A, van den Beek M, Antoniewski C, Ronsseray S.

Genetics. 2015 Dec;201(4):1381-96. doi: 10.1534/genetics.115.180307. Epub 2015 Oct 19.

9.

Isolation of small interfering RNAs using viral suppressors of RNA interference.

van den Beek M, Antoniewski C, Carré C.

Methods Mol Biol. 2014;1173:147-55. doi: 10.1007/978-1-4939-0931-5_13.

PMID:
24920367
10.

Identification of viral suppressors of RNAi by a reporter assay in Drosophila S2 cell culture.

van Cleef KW, van Mierlo JT, van den Beek M, van Rij RP.

Methods Mol Biol. 2011;721:201-13. doi: 10.1007/978-1-61779-037-9_12.

PMID:
21431687

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