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Method comparison for N-glycan profiling: Towards the standardization of glycoanalytical technologies for cell line analysis.

Kotsias M, Blanas A, van Vliet SJ, Pirro M, Spencer DIR, Kozak RP.

PLoS One. 2019 Oct 7;14(10):e0223270. doi: 10.1371/journal.pone.0223270. eCollection 2019.


Emergent microscale gradients give rise to metabolic cross-feeding and antibiotic tolerance in clonal bacterial populations.

Dal Co A, van Vliet S, Ackermann M.

Philos Trans R Soc Lond B Biol Sci. 2019 Nov 25;374(1786):20190080. doi: 10.1098/rstb.2019.0080. Epub 2019 Oct 7.


The role of multilevel selection in host microbiome evolution.

van Vliet S, Doebeli M.

Proc Natl Acad Sci U S A. 2019 Oct 8;116(41):20591-20597. doi: 10.1073/pnas.1909790116. Epub 2019 Sep 23.


The Plasticity of the Carbohydrate Recognition Domain Dictates the Exquisite Mechanism of Binding of Human Macrophage Galactose-Type Lectin.

Diniz A, Coelho H, Dias JS, van Vliet SJ, Jiménez-Barbero J, Corzana F, Cabrita EJ, Marcelo F.

Chemistry. 2019 Aug 12. doi: 10.1002/chem.201902780. [Epub ahead of print]


Metabolic activity affects the response of single cells to a nutrient switch in structured populations.

Dal Co A, Ackermann M, van Vliet S.

J R Soc Interface. 2019 Jul 26;16(156):20190182. doi: 10.1098/rsif.2019.0182. Epub 2019 Jul 10.


Obesity Alters the Muscle Protein Synthetic Response to Nutrition and Exercise.

Beals JW, Burd NA, Moore DR, van Vliet S.

Front Nutr. 2019 Jun 13;6:87. doi: 10.3389/fnut.2019.00087. eCollection 2019. Review.


Macrophage galactose-type lectin (MGL) is induced on M2 microglia and participates in the resolution phase of autoimmune neuroinflammation.

Ilarregui JM, Kooij G, Rodríguez E, van der Pol SMA, Koning N, Kalay H, van der Horst JC, van Vliet SJ, García-Vallejo JJ, de Vries HE, van Kooyk Y.

J Neuroinflammation. 2019 Jun 27;16(1):130. doi: 10.1186/s12974-019-1522-4.


Colorectal metastasis to the gallbladder mimicking a primary gallbladder malignancy: histopathological and molecular characteristics.

de Bitter TJJ, van der Linden RLA, van Vliet S, Weren F, Sie D, Ylstra B, van der Linden HC, Knijn N, Ligtenberg MJL, van der Post RS, Simmer F, Nagtegaal ID.

Histopathology. 2019 Sep;75(3):394-404. doi: 10.1111/his.13892. Epub 2019 Jul 18.


Hidden Figures in Age-Associated Regulation of Glucose Metabolism: Insulin Secretion and Plasma Clearance.

van Vliet S, Mittendorfer B.

Obesity (Silver Spring). 2019 Mar;27(3):359-360. doi: 10.1002/oby.22422. No abstract available.


MGL Ligand Expression Is Correlated to Lower Survival and Distant Metastasis in Cervical Squamous Cell and Adenosquamous Carcinoma.

Sahasrabudhe NM, van der Horst JC, Spaans V, Kenter G, de Kroon C, Bosse T, van Vliet SJ, Jordanova ES.

Front Oncol. 2019 Jan 29;9:29. doi: 10.3389/fonc.2019.00029. eCollection 2019.


Glycoproteomic Analysis of MGL-Binding Proteins on Acute T-Cell Leukemia Cells.

Pirro M, Schoof E, van Vliet SJ, Rombouts Y, Stella A, de Ru A, Mohammed Y, Wuhrer M, van Veelen PA, Hensbergen PJ.

J Proteome Res. 2019 Mar 1;18(3):1125-1132. doi: 10.1021/acs.jproteome.8b00796. Epub 2019 Jan 9.


Disruption of sialic acid metabolism drives tumor growth by augmenting CD8+ T cell apoptosis.

Cornelissen LAM, Blanas A, van der Horst JC, Kruijssen L, Zaal A, O'Toole T, Wiercx L, van Kooyk Y, van Vliet SJ.

Int J Cancer. 2019 May 1;144(9):2290-2302. doi: 10.1002/ijc.32084. Epub 2019 Jan 3.


Identification of a secondary binding site in human macrophage galactose-type lectin by microarray studies: Implications for the molecular recognition of its ligands.

Marcelo F, Supekar N, Corzana F, van der Horst JC, Vuist IM, Live D, Boons GPH, Smith DF, van Vliet SJ.

J Biol Chem. 2019 Jan 25;294(4):1300-1311. doi: 10.1074/jbc.RA118.004957. Epub 2018 Nov 30.


Transcriptional activation of fucosyltransferase (FUT) genes using the CRISPR-dCas9-VPR technology reveals potent N-glycome alterations in colorectal cancer cells.

Blanas A, Cornelissen LAM, Kotsias M, van der Horst JC, van de Vrugt HJ, Kalay H, Spencer DIR, Kozak RP, van Vliet SJ.

Glycobiology. 2019 Feb 1;29(2):137-150. doi: 10.1093/glycob/cwy096.


Dysregulated Handling of Dietary Protein and Muscle Protein Synthesis After Mixed-Meal Ingestion in Maintenance Hemodialysis Patients.

van Vliet S, Skinner SK, Beals JW, Pagni BA, Fang HY, Ulanov AV, Li Z, Paluska SA, Mazzulla M, West DWD, Moore DR, Wilund KR, Burd NA.

Kidney Int Rep. 2018 Aug 17;3(6):1403-1415. doi: 10.1016/j.ekir.2018.08.001. eCollection 2018 Nov.


Whole egg, but not egg white, ingestion induces mTOR colocalization with the lysosome after resistance exercise.

Abou Sawan S, van Vliet S, West DWD, Beals JW, Paluska SA, Burd NA, Moore DR.

Am J Physiol Cell Physiol. 2018 Oct 1;315(4):C537-C543. doi: 10.1152/ajpcell.00225.2018. Epub 2018 Aug 22.


Altered anabolic signalling and reduced stimulation of myofibrillar protein synthesis after feeding and resistance exercise in people with obesity.

Beals JW, Skinner SK, McKenna CF, Poozhikunnel EG, Farooqi SA, van Vliet S, Martinez IG, Ulanov AV, Li Z, Paluska SA, Burd NA.

J Physiol. 2018 Nov;596(21):5119-5133. doi: 10.1113/JP276210. Epub 2018 Sep 30.


The muscle anabolic effect of protein ingestion during a hyperinsulinaemic euglycaemic clamp in middle-aged women is not caused by leucine alone.

van Vliet S, Smith GI, Porter L, Ramaswamy R, Reeds DN, Okunade AL, Yoshino J, Klein S, Mittendorfer B.

J Physiol. 2018 Oct;596(19):4681-4692. doi: 10.1113/JP276504. Epub 2018 Aug 29.


The impact of exercise and nutrition on the regulation of skeletal muscle mass.

McGlory C, van Vliet S, Stokes T, Mittendorfer B, Phillips SM.

J Physiol. 2019 Mar;597(5):1251-1258. doi: 10.1113/JP275443. Epub 2018 Aug 1.


Generality of associations between biological richness and the rates of metabolic processes across microbial communities.

Patsch D, van Vliet S, Marcantini LG, Johnson DR.

Environ Microbiol. 2018 Dec;20(12):4356-4368. doi: 10.1111/1462-2920.14352. Epub 2018 Aug 7.


Toll-Like Receptor 4 Triggering Promotes Cytosolic Routing of DC-SIGN-Targeted Antigens for Presentation on MHC Class I.

Horrevorts SK, Duinkerken S, Bloem K, Secades P, Kalay H, Musters RJ, van Vliet SJ, García-Vallejo JJ, van Kooyk Y.

Front Immunol. 2018 Jun 14;9:1231. doi: 10.3389/fimmu.2018.01231. eCollection 2018.


Oncogenic BRAFV600E drives expression of MGL ligands in the colorectal cancer cell line HT29 through N-acetylgalactosamine-transferase 3.

Sahasrabudhe NM, Lenos K, van der Horst JC, Rodríguez E, van Vliet SJ.

Biol Chem. 2018 Jun 27;399(7):649-659. doi: 10.1515/hsz-2018-0120.


Corrigendum: Fucosylated Antigens in Cancer: An Alliance Toward Tumor Progression, Metastasis, and Resistance to Chemotherapy.

Blanas A, Sahasrabudhe NM, Rodríguez E, van Kooyk Y, van Vliet SJ.

Front Oncol. 2018 May 11;8:150. doi: 10.3389/fonc.2018.00150. eCollection 2018.


When muscle doesn't 'Rac' it up, adipose tissue 'AKTs'.

van Vliet S, Mittendorfer B.

J Physiol. 2018 Jun;596(12):2273-2275. doi: 10.1113/JP276179. Epub 2018 May 17. No abstract available.


Personalized treatment outcomes in patients with somatoform disorder: A concept mapping study.

Klemm S, van Broeckhuysen-Kloth S, van Vliet S, Oosterhuis L, Geenen R.

J Psychosom Res. 2018 Jun;109:19-24. doi: 10.1016/j.jpsychores.2018.03.009. Epub 2018 Mar 21.


Spatially Correlated Gene Expression in Bacterial Groups: The Role of Lineage History, Spatial Gradients, and Cell-Cell Interactions.

van Vliet S, Dal Co A, Winkler AR, Spriewald S, Stecher B, Ackermann M.

Cell Syst. 2018 Apr 25;6(4):496-507.e6. doi: 10.1016/j.cels.2018.03.009. Epub 2018 Apr 11.


Fucosylated Antigens in Cancer: An Alliance toward Tumor Progression, Metastasis, and Resistance to Chemotherapy.

Blanas A, Sahasrabudhe NM, Rodríguez E, van Kooyk Y, van Vliet SJ.

Front Oncol. 2018 Feb 23;8:39. doi: 10.3389/fonc.2018.00039. eCollection 2018. Review. Erratum in: Front Oncol. 2018 May 11;8:150.


Translocation and protein complex co-localization of mTOR is associated with postprandial myofibrillar protein synthesis at rest and after endurance exercise.

Abou Sawan S, van Vliet S, Parel JT, Beals JW, Mazzulla M, West DWD, Philp A, Li Z, Paluska SA, Burd NA, Moore DR.

Physiol Rep. 2018 Mar;6(5). doi: 10.14814/phy2.13628.


Using the glycan toolbox for pathogenic interventions and glycan immunotherapy.

Li RE, van Vliet SJ, van Kooyk Y.

Curr Opin Biotechnol. 2018 Jun;51:24-31. doi: 10.1016/j.copbio.2017.11.003. Epub 2017 Nov 22. Review.


Focus on focus: lack of coherence between systemic and microvascular indices of oedema formation.

Ten Tusscher B, Gudden C, van Vliet S, Smit B, Ince C, Boerma EC, de Grooth HS, Elbers PWG.

Anaesthesiol Intensive Ther. 2017;49(5):350-357. doi: 10.5603/AIT.a2017.0062. Epub 2017 Nov 18.


Rye Bran Modified with Cell Wall-Degrading Enzymes Influences the Kinetics of Plant Lignans but Not of Enterolignans in Multicatheterized Pigs.

Bolvig AK, Nørskov NP, van Vliet S, Foldager L, Curtasu MV, Hedemann MS, Sørensen JF, Lærke HN, Bach Knudsen KE.

J Nutr. 2017 Dec;147(12):2220-2227. doi: 10.3945/jn.117.258483. Epub 2017 Oct 4.


Consumption of whole eggs promotes greater stimulation of postexercise muscle protein synthesis than consumption of isonitrogenous amounts of egg whites in young men.

van Vliet S, Shy EL, Abou Sawan S, Beals JW, West DW, Skinner SK, Ulanov AV, Li Z, Paluska SA, Parsons CM, Moore DR, Burd NA.

Am J Clin Nutr. 2017 Dec;106(6):1401-1412. doi: 10.3945/ajcn.117.159855. Epub 2017 Oct 4.


Protein-Rich Food Ingestion Stimulates Mitochondrial Protein Synthesis in Sedentary Young Adults of Different BMIs.

Beals JW, Mackenzie RWA, van Vliet S, Skinner SK, Pagni BA, Niemiro GM, Ulanov AV, Li Z, Dilger AC, Paluska SA, De Lisio M, Burd NA.

J Clin Endocrinol Metab. 2017 Sep 1;102(9):3415-3424. doi: 10.1210/jc.2017-00360.


Endurance Exercise Attenuates Postprandial Whole-Body Leucine Balance in Trained Men.

Mazzulla M, Parel JT, Beals JW, VAN Vliet S, Abou Sawan S, West DWD, Paluska SA, Ulanov AV, Moore DR, Burd NA.

Med Sci Sports Exerc. 2017 Dec;49(12):2585-2592. doi: 10.1249/MSS.0000000000001394.


Effectiveness of three commonly used transition phase diets in the inpatient management of children with severe acute malnutrition: a pilot randomized controlled trial in Malawi.

Versloot CJ, Voskuijl W, van Vliet SJ, van den Heuvel M, Carter JC, Phiri A, Kerac M, Heikens GT, van Rheenen PF, Bandsma RHJ.

BMC Pediatr. 2017 Apr 26;17(1):112. doi: 10.1186/s12887-017-0860-6.


Fasciola hepatica Immune Regulates CD11c+ Cells by Interacting with the Macrophage Gal/GalNAc Lectin.

Rodríguez E, Carasi P, Frigerio S, da Costa V, van Vliet S, Noya V, Brossard N, van Kooyk Y, García-Vallejo JJ, Freire T.

Front Immunol. 2017 Mar 15;8:264. doi: 10.3389/fimmu.2017.00264. eCollection 2017.


Bet-hedging in bacteriocin producing Escherichia coli populations: the single cell perspective.

Bayramoglu B, Toubiana D, van Vliet S, Inglis RF, Shnerb N, Gillor O.

Sci Rep. 2017 Feb 6;7:42068. doi: 10.1038/srep42068.


Stochastic gene expression: bacterial elites in chemotaxis.

van Vliet S, Ackermann M.

Mol Syst Biol. 2017 Jan 23;13(1):909. doi: 10.15252/msb.20167458. No abstract available.


Kinetics of circulating progenitor cell mobilization during submaximal exercise.

Niemiro GM, Parel J, Beals J, van Vliet S, Paluska SA, Moore DR, Burd NA, De Lisio M.

J Appl Physiol (1985). 2017 Mar 1;122(3):675-682. doi: 10.1152/japplphysiol.00936.2016. Epub 2017 Jan 12.


Improved cancer specificity in PSA assay using Aleuria aurantia lectin coated Eu-nanoparticles for detection.

Kekki H, Peltola M, van Vliet S, Bangma C, van Kooyk Y, Pettersson K.

Clin Biochem. 2017 Jan;50(1-2):54-61. doi: 10.1016/j.clinbiochem.2016.06.015. Epub 2016 Nov 4.


Mortality in children with complicated severe acute malnutrition is related to intestinal and systemic inflammation: an observational cohort study.

Attia S, Versloot CJ, Voskuijl W, van Vliet SJ, Di Giovanni V, Zhang L, Richardson S, Bourdon C, Netea MG, Berkley JA, van Rheenen PF, Bandsma RH.

Am J Clin Nutr. 2016 Nov;104(5):1441-1449. Epub 2016 Sep 21.


Anabolic sensitivity of postprandial muscle protein synthesis to the ingestion of a protein-dense food is reduced in overweight and obese young adults.

Beals JW, Sukiennik RA, Nallabelli J, Emmons RS, van Vliet S, Young JR, Ulanov AV, Li Z, Paluska SA, De Lisio M, Burd NA.

Am J Clin Nutr. 2016 Oct;104(4):1014-1022. Epub 2016 Sep 7.


A Nanoparticle-Lectin Immunoassay Improves Discrimination of Serum CA125 from Malignant and Benign Sources.

Gidwani K, Huhtinen K, Kekki H, van Vliet S, Hynninen J, Koivuviita N, Perheentupa A, Poutanen M, Auranen A, Grenman S, Lamminmäki U, Carpen O, van Kooyk Y, Pettersson K.

Clin Chem. 2016 Oct;62(10):1390-400. doi: 10.1373/clinchem.2016.257691. Epub 2016 Aug 18.


Colorectal Cancer Risk in Patients With Lynch Syndrome and Inflammatory Bowel Disease.

Derikx LA, Smits LJ, van Vliet S, Dekker E, Aalfs CM, van Kouwen MC, Nagengast FM, Nagtegaal ID, Hoogerbrugge N, Hoentjen F.

Clin Gastroenterol Hepatol. 2017 Mar;15(3):454-458.e1. doi: 10.1016/j.cgh.2016.08.005. Epub 2016 Aug 10.


Blocking α1-integrin reverts the adhesive phenotype of adult fibroblasts towards a foetal-like migratory phenotype.

Walraven M, van Vliet SJ, Beelen RH, van Egmond M, Ulrich MM.

Exp Dermatol. 2016 Jun;25(6):480-2. doi: 10.1111/exd.12977. Epub 2016 May 6. No abstract available.


Development of Intrinsically Labeled Eggs and Poultry Meat for Use in Human Metabolic Research.

van Vliet S, Beals JW, Parel JT, Hanna CD, Utterback PL, Dilger AC, Ulanov AV, Li Z, Paluska SA, Moore DR, Parsons CM, Burd NA.

J Nutr. 2016 Jul;146(7):1428-33. doi: 10.3945/jn.115.228338. Epub 2016 Jun 8.


Sialic acid removal from dendritic cells improves antigen cross-presentation and boosts anti-tumor immune responses.

Silva M, Silva Z, Marques G, Ferro T, Gonçalves M, Monteiro M, van Vliet SJ, Mohr E, Lino AC, Fernandes AR, Lima FA, van Kooyk Y, Matos T, Tadokoro CE, Videira PA.

Oncotarget. 2016 Jul 5;7(27):41053-41066. doi: 10.18632/oncotarget.9419.


A Bitter Sweet Symphony: Immune Responses to Altered O-glycan Epitopes in Cancer.

Cornelissen LA, Van Vliet SJ.

Biomolecules. 2016 May 3;6(2). pii: E26. doi: 10.3390/biom6020026. Review.


The Human Glycoprotein Salivary Agglutinin Inhibits the Interaction of DC-SIGN and Langerin with Oral Micro-Organisms.

Boks MA, Gunput ST, Kosten I, Gibbs S, van Vliet SJ, Ligtenberg AJ, van Kooyk Y.

J Innate Immun. 2016;8(4):350-61. doi: 10.1159/000443016. Epub 2016 Apr 16.


Apoptotic vesicles as tumor vaccine.

Horrevorts SK, Garcia-Vallejo JJ, van Vliet SJ, van de Loosdrecht AA, van Kooyk Y, de Gruijl TD.

Immunotherapy. 2016;8(1):5-8. doi: 10.2217/imt.15.96. Epub 2015 Dec 7. No abstract available.


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