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Items: 43

1.

SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse.

Koopmans F, van Nierop P, Andres-Alonso M, Byrnes A, Cijsouw T, Coba MP, Cornelisse LN, Farrell RJ, Goldschmidt HL, Howrigan DP, Hussain NK, Imig C, de Jong APH, Jung H, Kohansalnodehi M, Kramarz B, Lipstein N, Lovering RC, MacGillavry H, Mariano V, Mi H, Ninov M, Osumi-Sutherland D, Pielot R, Smalla KH, Tang H, Tashman K, Toonen RFG, Verpelli C, Reig-Viader R, Watanabe K, van Weering J, Achsel T, Ashrafi G, Asi N, Brown TC, De Camilli P, Feuermann M, Foulger RE, Gaudet P, Joglekar A, Kanellopoulos A, Malenka R, Nicoll RA, Pulido C, de Juan-Sanz J, Sheng M, Südhof TC, Tilgner HU, Bagni C, Bayés À, Biederer T, Brose N, Chua JJE, Dieterich DC, Gundelfinger ED, Hoogenraad C, Huganir RL, Jahn R, Kaeser PS, Kim E, Kreutz MR, McPherson PS, Neale BM, O'Connor V, Posthuma D, Ryan TA, Sala C, Feng G, Hyman SE, Thomas PD, Smit AB, Verhage M.

Neuron. 2019 Jul 17;103(2):217-234.e4. doi: 10.1016/j.neuron.2019.05.002. Epub 2019 Jun 3.

PMID:
31171447
2.

Proteomics analysis identifies new markers associated with capillary cerebral amyloid angiopathy in Alzheimer's disease.

Hondius DC, Eigenhuis KN, Morrema THJ, van der Schors RC, van Nierop P, Bugiani M, Li KW, Hoozemans JJM, Smit AB, Rozemuller AJM.

Acta Neuropathol Commun. 2018 Jun 4;6(1):46. doi: 10.1186/s40478-018-0540-2.

3.

RNAi screening of subtracted transcriptomes reveals tumor suppression by taurine-activated GABAA receptors involved in volume regulation.

Wielders CLC, van Nierop P, Vormer TL, Foijer F, Verheij J, Lodder JC, Andersen JB, Mansvelder HD, Te Riele H.

PLoS One. 2018 May 22;13(5):e0196979. doi: 10.1371/journal.pone.0196979. eCollection 2018.

4.

Hippocampal extracellular matrix alterations contribute to cognitive impairment associated with a chronic depressive-like state in rats.

Riga D, Kramvis I, Koskinen MK, van Bokhoven P, van der Harst JE, Heistek TS, Jaap Timmerman A, van Nierop P, van der Schors RC, Pieneman AW, de Weger A, van Mourik Y, Schoffelmeer ANM, Mansvelder HD, Meredith RM, Hoogendijk WJG, Smit AB, Spijker S.

Sci Transl Med. 2017 Dec 20;9(421). pii: eaai8753. doi: 10.1126/scitranslmed.aai8753.

PMID:
29263233
5.

Age-Dependent Protein Aggregation Initiates Amyloid-β Aggregation.

Groh N, Bühler A, Huang C, Li KW, van Nierop P, Smit AB, Fändrich M, Baumann F, David DC.

Front Aging Neurosci. 2017 May 17;9:138. doi: 10.3389/fnagi.2017.00138. eCollection 2017.

6.

Dynamics of the mouse brain cortical synaptic proteome during postnatal brain development.

Gonzalez-Lozano MA, Klemmer P, Gebuis T, Hassan C, van Nierop P, van Kesteren RE, Smit AB, Li KW.

Sci Rep. 2016 Oct 17;6:35456. doi: 10.1038/srep35456.

7.

Impact of Cross-Sectoral Alcohol Policy on Youth Alcohol Consumption.

de Goeij MC, Jacobs MA, van Nierop P, van der Veeken-Vlassak IA, van de Mheen D, Schoenmakers TM, Harting J, Kunst AE.

J Stud Alcohol Drugs. 2016 Jul;77(4):596-605.

PMID:
27340964
8.

Development of an Online Cell-Based Bioactivity Screening Method by Coupling Liquid Chromatography to Flow Cytometry with Parallel Mass Spectrometry.

Otvos RA, van Nierop P, Niessen WM, Kini RM, Somsen GW, Smit AB, Kool J.

Anal Chem. 2016 May 3;88(9):4825-32. doi: 10.1021/acs.analchem.6b00455. Epub 2016 Apr 20.

PMID:
27046509
9.

Profiling the human hippocampal proteome at all pathologic stages of Alzheimer's disease.

Hondius DC, van Nierop P, Li KW, Hoozemans JJ, van der Schors RC, van Haastert ES, van der Vies SM, Rozemuller AJ, Smit AB.

Alzheimers Dement. 2016 Jun;12(6):654-68. doi: 10.1016/j.jalz.2015.11.002. Epub 2016 Jan 6.

PMID:
26772638
10.

Ubiquitin ligase TRIM3 controls hippocampal plasticity and learning by regulating synaptic γ-actin levels.

Schreiber J, Végh MJ, Dawitz J, Kroon T, Loos M, Labonté D, Li KW, Van Nierop P, Van Diepen MT, De Zeeuw CI, Kneussel M, Meredith RM, Smit AB, Van Kesteren RE.

J Cell Biol. 2015 Nov 9;211(3):569-86. doi: 10.1083/jcb.201506048. Epub 2015 Nov 2.

11.

Progression and recovery of Parkinsonism in a chronic progressive MPTP-induction model in the marmoset without persistent molecular and cellular damage.

Franke SK, van Kesteren RE, Wubben JA, Hofman S, Paliukhovich I, van der Schors RC, van Nierop P, Smit AB, Philippens IH.

Neuroscience. 2016 Jan 15;312:247-59. doi: 10.1016/j.neuroscience.2015.09.065. Epub 2015 Oct 9.

PMID:
26431624
12.

Functional characterization of the PCLO p.Ser4814Ala variant associated with major depressive disorder reveals cellular but not behavioral differences.

Giniatullina A, Maroteaux G, Geerts CJ, Koopmans B, Loos M, Klaassen R, Chen N, van der Schors RC, van Nierop P, Li KW, de Jong J, Altrock WD, Cornelisse LN, Toonen RF, van der Sluis S, Sullivan PF, Stiedl O, Posthuma D, Smit AB, Groffen AJ, Verhage M.

Neuroscience. 2015 Aug 6;300:518-38. doi: 10.1016/j.neuroscience.2015.05.047. Epub 2015 Jun 1.

PMID:
26045179
13.

Strain Differences in Presynaptic Function: PROTEOMICS, ULTRASTRUCTURE, AND PHYSIOLOGY OF HIPPOCAMPAL SYNAPSES IN DBA/2J AND C57Bl/6J MICE.

Lenselink AM, Rotaru DC, Li KW, van Nierop P, Rao-Ruiz P, Loos M, van der Schors R, Gouwenberg Y, Wortel J, Mansvelder HD, Smit AB, Spijker S.

J Biol Chem. 2015 Jun 19;290(25):15635-45. doi: 10.1074/jbc.M114.628776. Epub 2015 Apr 24.

14.

Time-dependent changes in the mouse hippocampal synaptic membrane proteome after contextual fear conditioning.

Rao-Ruiz P, Carney KE, Pandya N, van der Loo RJ, Verheijen MH, van Nierop P, Smit AB, Spijker S.

Hippocampus. 2015 Nov;25(11):1250-61. doi: 10.1002/hipo.22432. Epub 2015 Mar 30.

PMID:
25708624
15.

Proteomic analysis of gliosomes from mouse brain: identification and investigation of glial membrane proteins.

Carney KE, Milanese M, van Nierop P, Li KW, Oliet SH, Smit AB, Bonanno G, Verheijen MH.

J Proteome Res. 2014 Dec 5;13(12):5918-27. doi: 10.1021/pr500829z. Epub 2014 Nov 4.

PMID:
25308431
16.

Hippocampal extracellular matrix levels and stochasticity in synaptic protein expression increase with age and are associated with age-dependent cognitive decline.

Végh MJ, Rausell A, Loos M, Heldring CM, Jurkowski W, van Nierop P, Paliukhovich I, Li KW, del Sol A, Smit AB, Spijker S, van Kesteren RE.

Mol Cell Proteomics. 2014 Nov;13(11):2975-85. doi: 10.1074/mcp.M113.032086. Epub 2014 Jul 20.

17.

Reducing hippocampal extracellular matrix reverses early memory deficits in a mouse model of Alzheimer's disease.

Végh MJ, Heldring CM, Kamphuis W, Hijazi S, Timmerman AJ, Li KW, van Nierop P, Mansvelder HD, Hol EM, Smit AB, van Kesteren RE.

Acta Neuropathol Commun. 2014 Jun 29;2:76. doi: 10.1186/s40478-014-0076-z.

18.

C-terminal interactors of the AMPA receptor auxiliary subunit Shisa9.

Karataeva AR, Klaassen RV, Ströder J, Ruiperez-Alonso M, Hjorth JJ, van Nierop P, Spijker S, Mansvelder HD, Smit AB.

PLoS One. 2014 Feb 3;9(2):e87360. doi: 10.1371/journal.pone.0087360. eCollection 2014.

19.

SynSysNet: integration of experimental data on synaptic protein-protein interactions with drug-target relations.

von Eichborn J, Dunkel M, Gohlke BO, Preissner SC, Hoffmann MF, Bauer JM, Armstrong JD, Schaefer MH, Andrade-Navarro MA, Le Novere N, Croning MD, Grant SG, van Nierop P, Smit AB, Preissner R.

Nucleic Acids Res. 2013 Jan;41(Database issue):D834-40. doi: 10.1093/nar/gks1040. Epub 2012 Nov 11.

20.

Program completion of a web-based tailored lifestyle intervention for adults: differences between a sequential and a simultaneous approach.

Schulz DN, Schneider F, de Vries H, van Osch LA, van Nierop PW, Kremers SP.

J Med Internet Res. 2012 Mar 8;14(2):e26. doi: 10.2196/jmir.1968.

21.

Synaptic proteome changes in a DNA repair deficient ercc1 mouse model of accelerated aging.

Végh MJ, de Waard MC, van der Pluijm I, Ridwan Y, Sassen MJ, van Nierop P, van der Schors RC, Li KW, Hoeijmakers JH, Smit AB, van Kesteren RE.

J Proteome Res. 2012 Mar 2;11(3):1855-67. doi: 10.1021/pr201203m. Epub 2012 Feb 13.

PMID:
22289077
22.

Meta-analyses identify 13 loci associated with age at menopause and highlight DNA repair and immune pathways.

Stolk L, Perry JR, Chasman DI, He C, Mangino M, Sulem P, Barbalic M, Broer L, Byrne EM, Ernst F, Esko T, Franceschini N, Gudbjartsson DF, Hottenga JJ, Kraft P, McArdle PF, Porcu E, Shin SY, Smith AV, van Wingerden S, Zhai G, Zhuang WV, Albrecht E, Alizadeh BZ, Aspelund T, Bandinelli S, Lauc LB, Beckmann JS, Boban M, Boerwinkle E, Broekmans FJ, Burri A, Campbell H, Chanock SJ, Chen C, Cornelis MC, Corre T, Coviello AD, d'Adamo P, Davies G, de Faire U, de Geus EJ, Deary IJ, Dedoussis GV, Deloukas P, Ebrahim S, Eiriksdottir G, Emilsson V, Eriksson JG, Fauser BC, Ferreli L, Ferrucci L, Fischer K, Folsom AR, Garcia ME, Gasparini P, Gieger C, Glazer N, Grobbee DE, Hall P, Haller T, Hankinson SE, Hass M, Hayward C, Heath AC, Hofman A, Ingelsson E, Janssens AC, Johnson AD, Karasik D, Kardia SL, Keyzer J, Kiel DP, Kolcic I, Kutalik Z, Lahti J, Lai S, Laisk T, Laven JS, Lawlor DA, Liu J, Lopez LM, Louwers YV, Magnusson PK, Marongiu M, Martin NG, Klaric IM, Masciullo C, McKnight B, Medland SE, Melzer D, Mooser V, Navarro P, Newman AB, Nyholt DR, Onland-Moret NC, Palotie A, Paré G, Parker AN, Pedersen NL, Peeters PH, Pistis G, Plump AS, Polasek O, Pop VJ, Psaty BM, Räikkönen K, Rehnberg E, Rotter JI, Rudan I, Sala C, Salumets A, Scuteri A, Singleton A, Smith JA, Snieder H, Soranzo N, Stacey SN, Starr JM, Stathopoulou MG, Stirrups K, Stolk RP, Styrkarsdottir U, Sun YV, Tenesa A, Thorand B, Toniolo D, Tryggvadottir L, Tsui K, Ulivi S, van Dam RM, van der Schouw YT, van Gils CH, van Nierop P, Vink JM, Visscher PM, Voorhuis M, Waeber G, Wallaschofski H, Wichmann HE, Widen E, Wijnands-van Gent CJ, Willemsen G, Wilson JF, Wolffenbuttel BH, Wright AF, Yerges-Armstrong LM, Zemunik T, Zgaga L, Zillikens MC, Zygmunt M; LifeLines Cohort Study, Arnold AM, Boomsma DI, Buring JE, Crisponi L, Demerath EW, Gudnason V, Harris TB, Hu FB, Hunter DJ, Launer LJ, Metspalu A, Montgomery GW, Oostra BA, Ridker PM, Sanna S, Schlessinger D, Spector TD, Stefansson K, Streeten EA, Thorsteinsdottir U, Uda M, Uitterlinden AG, van Duijn CM, Völzke H, Murray A, Murabito JM, Visser JA, Lunetta KL.

Nat Genet. 2012 Jan 22;44(3):260-8. doi: 10.1038/ng.1051.

23.

The synaptic proteome during development and plasticity of the mouse visual cortex.

Dahlhaus M, Li KW, van der Schors RC, Saiepour MH, van Nierop P, Heimel JA, Hermans JM, Loos M, Smit AB, Levelt CN.

Mol Cell Proteomics. 2011 May;10(5):M110.005413. doi: 10.1074/mcp.M110.005413. Epub 2011 Mar 11.

24.

Fragment growing induces conformational changes in acetylcholine-binding protein: a structural and thermodynamic analysis.

Edink E, Rucktooa P, Retra K, Akdemir A, Nahar T, Zuiderveld O, van Elk R, Janssen E, van Nierop P, van Muijlwijk-Koezen J, Smit AB, Sixma TK, Leurs R, de Esch IJ.

J Am Chem Soc. 2011 Apr 13;133(14):5363-71. doi: 10.1021/ja110571r. Epub 2011 Feb 15.

PMID:
21322593
25.

Gaining efficiency by parallel quantification and identification of iTRAQ-labeled peptides using HCD and decision tree guided CID/ETD on an LTQ Orbitrap.

Mischerikow N, van Nierop P, Li KW, Bernstein HG, Smit AB, Heck AJ, Altelaar AF.

Analyst. 2010 Oct;135(10):2643-52. doi: 10.1039/c0an00267d. Epub 2010 Aug 10.

PMID:
20714520
26.

Transcriptome analysis of the central nervous system of the mollusc Lymnaea stagnalis.

Feng ZP, Zhang Z, van Kesteren RE, Straub VA, van Nierop P, Jin K, Nejatbakhsh N, Goldberg JI, Spencer GE, Yeoman MS, Wildering W, Coorssen JR, Croll RP, Buck LT, Syed NI, Smit AB.

BMC Genomics. 2009 Sep 23;10:451. doi: 10.1186/1471-2164-10-451.

27.

Acetylcholine-binding proteins: functional and structural homologs of nicotinic acetylcholine receptors.

Smit AB, Celie PH, Kasheverov IE, Mordvintsev DY, van Nierop P, Bertrand D, Tsetlin V, Sixma TK.

J Mol Neurosci. 2006;30(1-2):9-10.

PMID:
17192605
28.

Stages of change for moderate-intensity physical activity in deprived neighborhoods.

Kloek GC, van Lenthe FJ, van Nierop PW, Schrijvers CT, Mackenbach JP.

Prev Med. 2006 Oct;43(4):325-31. Epub 2006 Jun 30.

PMID:
16808969
29.

Identification of molluscan nicotinic acetylcholine receptor (nAChR) subunits involved in formation of cation- and anion-selective nAChRs.

van Nierop P, Keramidas A, Bertrand S, van Minnen J, Gouwenberg Y, Bertrand D, Smit AB.

J Neurosci. 2005 Nov 16;25(46):10617-26.

30.

Identification and functional expression of a family of nicotinic acetylcholine receptor subunits in the central nervous system of the mollusc Lymnaea stagnalis.

van Nierop P, Bertrand S, Munno DW, Gouwenberg Y, van Minnen J, Spafford JD, Syed NI, Bertrand D, Smit AB.

J Biol Chem. 2006 Jan 20;281(3):1680-91. Epub 2005 Nov 11.

31.

Impact evaluation of a Dutch community intervention to improve health-related behaviour in deprived neighbourhoods.

Kloek GC, van Lenthe FJ, van Nierop PW, Koelen MA, Mackenbach JP.

Health Place. 2006 Dec;12(4):665-77. Epub 2005 Oct 25.

PMID:
16253541
32.

Crystal structure of nicotinic acetylcholine receptor homolog AChBP in complex with an alpha-conotoxin PnIA variant.

Celie PH, Kasheverov IE, Mordvintsev DY, Hogg RC, van Nierop P, van Elk R, van Rossum-Fikkert SE, Zhmak MN, Bertrand D, Tsetlin V, Sixma TK, Smit AB.

Nat Struct Mol Biol. 2005 Jul;12(7):582-8. Epub 2005 Jun 12.

PMID:
15951818
33.

Crystal structure of acetylcholine-binding protein from Bulinus truncatus reveals the conserved structural scaffold and sites of variation in nicotinic acetylcholine receptors.

Celie PH, Klaassen RV, van Rossum-Fikkert SE, van Elk R, van Nierop P, Smit AB, Sixma TK.

J Biol Chem. 2005 Jul 15;280(28):26457-66. Epub 2005 May 16.

34.

Stages of change for fruit and vegetable consumption in deprived neighborhoods.

Kloek GC, van Lenthe FJ, van Nierop PW, Mackenbach JP.

Health Educ Behav. 2004 Apr;31(2):223-41.

PMID:
15090123
35.

Depression and the lower risk for breast cancer development in middle-aged women: a prospective study.

Nyklícek I, Louwman WJ, Van Nierop PW, Wijnands CJ, Coebergh JW, Pop VJ.

Psychol Med. 2003 Aug;33(6):1111-7.

PMID:
12946095
36.

Calcium channel structural determinants of synaptic transmission between identified invertebrate neurons.

Spafford JD, Munno DW, Van Nierop P, Feng ZP, Jarvis SE, Gallin WJ, Smit AB, Zamponi GW, Syed NI.

J Biol Chem. 2003 Feb 7;278(6):4258-67. Epub 2002 Nov 27.

37.

Test characteristics of carbohydrate-deficient transferrin and gamma-glutamyltransferase in alcohol-using perimenopausal women.

van Pelt J, Leusink GL, van Nierop PW, Keyzer JJ.

Alcohol Clin Exp Res. 2000 Feb;24(2):176-9.

PMID:
10698369
38.

Replantation of the radial side of the hand in the rhesus monkey: anatomical and functional aspects. A preliminary study to composite tissue allografting.

Hovius SE, Stevens HP, Van Nierop PW, Godschalk M, Kusuma A, Deelen G, Van de Bergh M, Van der Meulen JC.

J Hand Surg Br. 1992 Dec;17(6):651-6.

PMID:
1484247
39.

Allogeneic transplantation of the radial side of the hand in the rhesus monkey: I. Technical aspects.

Hovius SE, Stevens HP, van Nierop PW, Rating W, van Strik R, van der Meulen JC.

Plast Reconstr Surg. 1992 Apr;89(4):700-9.

PMID:
1546083
40.

Immunologic aspects and complications of composite tissue allografting for upper extremity reconstruction: a study in the rhesus monkey.

Stevens HP, Hovius SE, Heeney JL, van Nierop PW, Jonker M.

Transplant Proc. 1991 Feb;23(1 Pt 1):623-5. No abstract available.

PMID:
1990628
41.

A protective thermoplast splint for the forearm and hand in nonhuman primates.

Hovius SE, Stevens HP, Peters B, Van Nierop PW.

Lab Anim. 1991 Jan;25(1):1-3.

PMID:
2010970
42.

Immunological aspects of allogeneic partial hand transplantation in the rhesus monkey.

Stevens HP, Hovius SE, Vuzevski VD, van Nierop PW, Gotte M, Roche NA, Jonker M.

Transplant Proc. 1990 Aug;22(4):2006-8. No abstract available.

PMID:
2143871
43.

Wheelchair racing: effects of rim diameter and speed on physiology and technique.

van der Woude LH, Veeger HE, Rozendal RH, van Ingen Schenau GJ, Rooth F, van Nierop P.

Med Sci Sports Exerc. 1988 Oct;20(5):492-500.

PMID:
3193866

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