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Items: 38

1.

Assessing Cofactor Usage in Pseudoclostridium thermosuccinogenes via Heterologous Expression of Central Metabolic Enzymes.

Koendjbiharie JG, Wevers K, van Kranenburg R.

Front Microbiol. 2019 May 24;10:1162. doi: 10.3389/fmicb.2019.01162. eCollection 2019.

2.

SmartTags: IoT Product Passport for Circular Economy Based on Printed Sensors and Unique Item-Level Identifiers.

Gligoric N, Krco S, Hakola L, Vehmas K, De S, Moessner K, Jansson K, Polenz I, Van Kranenburg R.

Sensors (Basel). 2019 Jan 30;19(3). pii: E586. doi: 10.3390/s19030586.

3.

Engineering Geobacillus thermodenitrificans to introduce cellulolytic activity; expression of native and heterologous cellulase genes.

Daas MJA, Nijsse B, van de Weijer AHP, Groenendaal BWAJ, Janssen F, van der Oost J, van Kranenburg R.

BMC Biotechnol. 2018 Jun 27;18(1):42. doi: 10.1186/s12896-018-0453-y.

4.

Investigating the Central Metabolism of Clostridium thermosuccinogenes.

Koendjbiharie JG, Wiersma K, van Kranenburg R.

Appl Environ Microbiol. 2018 Jun 18;84(13). pii: e00363-18. doi: 10.1128/AEM.00363-18. Print 2018 Jul 1.

5.

Hijacking CRISPR-Cas for high-throughput bacterial metabolic engineering: advances and prospects.

Mougiakos I, Bosma EF, Ganguly J, van der Oost J, van Kranenburg R.

Curr Opin Biotechnol. 2018 Apr;50:146-157. doi: 10.1016/j.copbio.2018.01.002. Epub 2018 Feb 3. Review.

6.

In vivo selection of sfGFP variants with improved and reliable functionality in industrially important thermophilic bacteria.

Frenzel E, Legebeke J, van Stralen A, van Kranenburg R, Kuipers OP.

Biotechnol Biofuels. 2018 Jan 17;11:8. doi: 10.1186/s13068-017-1008-5. eCollection 2018.

7.

Characterizing a thermostable Cas9 for bacterial genome editing and silencing.

Mougiakos I, Mohanraju P, Bosma EF, Vrouwe V, Finger Bou M, Naduthodi MIS, Gussak A, Brinkman RBL, van Kranenburg R, van der Oost J.

Nat Commun. 2017 Nov 21;8(1):1647. doi: 10.1038/s41467-017-01591-4.

8.

Complete Genome Sequence of Geobacillus thermodenitrificans T12, A Potential Host for Biotechnological Applications.

Daas MJA, Vriesendorp B, van de Weijer AHP, van der Oost J, van Kranenburg R.

Curr Microbiol. 2018 Jan;75(1):49-56. doi: 10.1007/s00284-017-1349-0. Epub 2017 Sep 12.

9.

Biochemical characterization of the xylan hydrolysis profile of the extracellular endo-xylanase from Geobacillus thermodenitrificans T12.

Daas MJA, Martínez PM, van de Weijer AHP, van der Oost J, de Vos WM, Kabel MA, van Kranenburg R.

BMC Biotechnol. 2017 May 18;17(1):44. doi: 10.1186/s12896-017-0357-2.

10.

Efficient Genome Editing of a Facultative Thermophile Using Mesophilic spCas9.

Mougiakos I, Bosma EF, Weenink K, Vossen E, Goijvaerts K, van der Oost J, van Kranenburg R.

ACS Synth Biol. 2017 May 19;6(5):849-861. doi: 10.1021/acssynbio.6b00339. Epub 2017 Feb 16.

11.

Isolation of a genetically accessible thermophilic xylan degrading bacterium from compost.

Daas MJ, van de Weijer AH, de Vos WM, van der Oost J, van Kranenburg R.

Biotechnol Biofuels. 2016 Oct 6;9:210. eCollection 2016.

12.

Complete genome sequence of thermophilic Bacillus smithii type strain DSM 4216(T).

Bosma EF, Koehorst JJ, van Hijum SA, Renckens B, Vriesendorp B, van de Weijer AH, Schaap PJ, de Vos WM, van der Oost J, van Kranenburg R.

Stand Genomic Sci. 2016 Aug 24;11(1):52. doi: 10.1186/s40793-016-0172-8. eCollection 2016.

13.

Next Generation Prokaryotic Engineering: The CRISPR-Cas Toolkit.

Mougiakos I, Bosma EF, de Vos WM, van Kranenburg R, van der Oost J.

Trends Biotechnol. 2016 Jul;34(7):575-587. doi: 10.1016/j.tibtech.2016.02.004. Epub 2016 Mar 2. Review.

PMID:
26944793
14.

Establishment of markerless gene deletion tools in thermophilic Bacillus smithii and construction of multiple mutant strains.

Bosma EF, van de Weijer AH, van der Vlist L, de Vos WM, van der Oost J, van Kranenburg R.

Microb Cell Fact. 2015 Jul 7;14:99. doi: 10.1186/s12934-015-0286-5.

15.

Isolation and screening of thermophilic bacilli from compost for electrotransformation and fermentation: characterization of Bacillus smithii ET 138 as a new biocatalyst.

Bosma EF, van de Weijer AH, Daas MJ, van der Oost J, de Vos WM, van Kranenburg R.

Appl Environ Microbiol. 2015 Mar;81(5):1874-83. doi: 10.1128/AEM.03640-14. Epub 2015 Jan 2.

16.

Functional analysis of the ComK protein of Bacillus coagulans.

Kovács ÁT, Eckhardt TH, van Hartskamp M, van Kranenburg R, Kuipers OP.

PLoS One. 2013;8(1):e53471. doi: 10.1371/journal.pone.0053471. Epub 2013 Jan 3. Erratum in: PLoS One. 2013;8(2). doi:10.1371/annotation/16c64f49-b803-458d-8c8c-fa22a9c649b2. van Hartskamp, Mariska [added].

17.

Impact of 4 Lactobacillus plantarum capsular polysaccharide clusters on surface glycan composition and host cell signaling.

Remus DM, van Kranenburg R, van Swam II, Taverne N, Bongers RS, Wels M, Wells JM, Bron PA, Kleerebezem M.

Microb Cell Fact. 2012 Nov 21;11:149. doi: 10.1186/1475-2859-11-149.

18.

Genetic tool development for a new host for biotechnology, the thermotolerant bacterium Bacillus coagulans.

Kovács AT, van Hartskamp M, Kuipers OP, van Kranenburg R.

Appl Environ Microbiol. 2010 Jun;76(12):4085-8. doi: 10.1128/AEM.03060-09. Epub 2010 Apr 16.

19.

Analysis of acid-stressed Bacillus cereus reveals a major oxidative response and inactivation-associated radical formation.

Mols M, van Kranenburg R, van Melis CC, Moezelaar R, Abee T.

Environ Microbiol. 2010 Apr;12(4):873-85. doi: 10.1111/j.1462-2920.2009.02132.x. Epub 2010 Jan 13.

PMID:
20074238
20.

Comparative analysis of transcriptional and physiological responses of Bacillus cereus to organic and inorganic acid shocks.

Mols M, van Kranenburg R, Tempelaars MH, van Schaik W, Moezelaar R, Abee T.

Int J Food Microbiol. 2010 Jan 31;137(1):13-21. doi: 10.1016/j.ijfoodmicro.2009.09.027. Epub 2009 Oct 5.

PMID:
19853945
21.

Complete sequences of four plasmids of Lactococcus lactis subsp. cremoris SK11 reveal extensive adaptation to the dairy environment.

Siezen RJ, Renckens B, van Swam I, Peters S, van Kranenburg R, Kleerebezem M, de Vos WM.

Appl Environ Microbiol. 2005 Dec;71(12):8371-82.

22.

Functional analysis of three plasmids from Lactobacillus plantarum.

van Kranenburg R, Golic N, Bongers R, Leer RJ, de Vos WM, Siezen RJ, Kleerebezem M.

Appl Environ Microbiol. 2005 Mar;71(3):1223-30.

23.

Molecular characterization of the CmbR activator-binding site in the metC-cysK promoter region in Lactococcus lactis.

Golic N, Schliekelmann M, Fernández M, Kleerebezem M, van Kranenburg R.

Microbiology. 2005 Feb;151(Pt 2):439-46.

PMID:
15699193
24.

Identification and genetic characterization of a novel proteinase, PrtR, from the human isolate Lactobacillus rhamnosus BGT10.

Pastar I, Tonic I, Golic N, Kojic M, van Kranenburg R, Kleerebezem M, Topisirovic L, Jovanovic G.

Appl Environ Microbiol. 2003 Oct;69(10):5802-11.

25.

Increased exopolysaccharide production in Lactococcus lactis due to increased levels of expression of the NIZO B40 eps gene cluster.

Boels IC, Van Kranenburg R, Kanning MW, Chong BF, De Vos WM, Kleerebezem M.

Appl Environ Microbiol. 2003 Aug;69(8):5029-31.

26.

Complete genome sequence of Lactobacillus plantarum WCFS1.

Kleerebezem M, Boekhorst J, van Kranenburg R, Molenaar D, Kuipers OP, Leer R, Tarchini R, Peters SA, Sandbrink HM, Fiers MW, Stiekema W, Lankhorst RM, Bron PA, Hoffer SM, Groot MN, Kerkhoven R, de Vries M, Ursing B, de Vos WM, Siezen RJ.

Proc Natl Acad Sci U S A. 2003 Feb 18;100(4):1990-5. Epub 2003 Feb 3.

27.

Regulation of the metC-cysK operon, involved in sulfur metabolism in Lactococcus lactis.

Fernández M, Kleerebezem M, Kuipers OP, Siezen RJ, van Kranenburg R.

J Bacteriol. 2002 Jan;184(1):82-90.

28.

Nucleotide sequence analysis of the lactococcal EPS plasmid pNZ4000.

van Kranenburg R, Kleerebezem M, de Vos WM.

Plasmid. 2000 Mar;43(2):130-6.

PMID:
10686131
29.

Molecular and functional analyses of the metC gene of Lactococcus lactis, encoding cystathionine beta-lyase.

Fernández M, van Doesburg W, Rutten GA, Marugg JD, Alting AC, van Kranenburg R, Kuipers OP.

Appl Environ Microbiol. 2000 Jan;66(1):42-8.

30.

Exopolysaccharides produced by Lactococcus lactis: from genetic engineering to improved rheological properties?

Kleerebezem M, van Kranenburg R, Tuinier R, Boels IC, Zoon P, Looijesteijn E, Hugenholtz J, de Vos WM.

Antonie Van Leeuwenhoek. 1999 Jul-Nov;76(1-4):357-65. Review.

PMID:
10532391
31.
32.

Genetics and engineering of microbial exopolysaccharides for food: approaches for the production of existing and novel polysaccharides.

van Kranenburg R, Boels IC, Kleerebezem M, de Vos WM.

Curr Opin Biotechnol. 1999 Oct;10(5):498-504. Review.

PMID:
10508628
33.
35.

Molecular characterization of the plasmid-encoded eps gene cluster essential for exopolysaccharide biosynthesis in Lactococcus lactis.

van Kranenburg R, Marugg JD, van Swam II, Willem NJ, de Vos WM.

Mol Microbiol. 1997 Apr;24(2):387-97.

36.

Carbon monoxide dehydrogenase from Methanosarcina frisia Gö1. Characterization of the enzyme and the regulated expression of two operon-like cdh gene clusters.

Eggen RI, van Kranenburg R, Vriesema AJ, Geerling AC, Verhagen MF, Hagen WR, de Vos WM.

J Biol Chem. 1996 Jun 14;271(24):14256-63.

37.
38.

Medium-dependent regulation of proteinase gene expression in Lactococcus lactis: control of transcription initiation by specific dipeptides.

Marugg JD, Meijer W, van Kranenburg R, Laverman P, Bruinenberg PG, de Vos WM.

J Bacteriol. 1995 Jun;177(11):2982-9.

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