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Items: 32

1.

CRISPR-TSKO: A Technique for Efficient Mutagenesis in Specific Cell Types, Tissues, or Organs in Arabidopsis.

Decaestecker W, Andrade Buono R, Pfeiffer M, Vangheluwe N, Jourquin J, Karimi M, van Isterdael G, Beeckman T, Nowack MK, Jacobs TB.

Plant Cell. 2019 Sep 27. pii: tpc.00454.2019. doi: 10.1105/tpc.19.00454. [Epub ahead of print]

2.

Cyt-Geist: Current and Future Challenges in Cytometry: Reports of the CYTO 2018 Conference Workshops.

Czechowska K, Lannigan J, Wang L, Arcidiacono J, Ashhurst TM, Barnard RM, Bauer S, Bispo C, Bonilla DL, Brinkman RR, Cabanski M, Chang HD, Chakrabarti L, Chojnowski G, Cotleur B, Degheidy H, Dela Cruz GV, Eck S, Elliott J, Errington R, Filby A, Gagnon D, Gardner R, Green C, Gregory M, Groves CJ, Hall C, Hammes F, Hedrick M, Hoffman R, Icha J, Ivaska J, Jenner DC, Jones D, Kerckhof FM, Kukat C, Lanham D, Leavesley S, Lee M, Lin-Gibson S, Litwin V, Liu Y, Molloy J, Moore JS, Müller S, Nedbal J, Niesner R, Nitta N, Ohlsson-Wilhelm B, Paul NE, Perfetto S, Portat Z, Props R, Radtke S, Rayanki R, Rieger A, Rogers S, Rubbens P, Salomon R, Schiemann M, Sharpe J, Sonder SU, Stewart JJ, Sun Y, Ulrich H, Van Isterdael G, Vitaliti A, van Vreden C, Weber M, Zimmermann J, Vacca G, Wallace P, Tárnok A.

Cytometry A. 2019 Jun;95(6):598-644. doi: 10.1002/cyto.a.23777. No abstract available.

PMID:
31207046
3.

A single-cell atlas of mouse brain macrophages reveals unique transcriptional identities shaped by ontogeny and tissue environment.

Van Hove H, Martens L, Scheyltjens I, De Vlaminck K, Pombo Antunes AR, De Prijck S, Vandamme N, De Schepper S, Van Isterdael G, Scott CL, Aerts J, Berx G, Boeckxstaens GE, Vandenbroucke RE, Vereecke L, Moechars D, Guilliams M, Van Ginderachter JA, Saeys Y, Movahedi K.

Nat Neurosci. 2019 Jun;22(6):1021-1035. doi: 10.1038/s41593-019-0393-4. Epub 2019 May 6.

PMID:
31061494
4.

Myocarditis Elicits Dendritic Cell and Monocyte Infiltration in the Heart and Self-Antigen Presentation by Conventional Type 2 Dendritic Cells.

Van der Borght K, Scott CL, Martens L, Sichien D, Van Isterdael G, Nindl V, Saeys Y, Boon L, Ludewig B, Gillebert TC, Lambrecht BN.

Front Immunol. 2018 Nov 21;9:2714. doi: 10.3389/fimmu.2018.02714. eCollection 2018.

5.

Overexpression of Gilz Protects Mice Against Lethal Septic Peritonitis.

Ballegeer M, Vandewalle J, Eggermont M, Van Isterdael G, Dejager L, De Bus L, Decruyenaere J, Vandenbroucke RE, Libert C.

Shock. 2019 Aug;52(2):208-214. doi: 10.1097/SHK.0000000000001252.

PMID:
30124596
6.

A Spatiotemporal DNA Endoploidy Map of the Arabidopsis Root Reveals Roles for the Endocycle in Root Development and Stress Adaptation.

Bhosale R, Boudolf V, Cuevas F, Lu R, Eekhout T, Hu Z, Van Isterdael G, Lambert GM, Xu F, Nowack MK, Smith RS, Vercauteren I, De Rycke R, Storme V, Beeckman T, Larkin JC, Kremer A, Höfte H, Galbraith DW, Kumpf RP, Maere S, De Veylder L.

Plant Cell. 2018 Oct;30(10):2330-2351. doi: 10.1105/tpc.17.00983. Epub 2018 Aug 16.

7.

Epitope mapping and kinetics of CD4 T cell immunity to pneumonia virus of mice in the C57BL/6 strain.

Vandersarren L, Bosteels C, Vanheerswynghels M, Moon JJ, Easton AJ, Van Isterdael G, Janssens S, Lambrecht BN, van Helden MJ.

Sci Rep. 2017 Jun 14;7(1):3472. doi: 10.1038/s41598-017-03042-y.

8.

Regulated IRE1-dependent mRNA decay sets the threshold for dendritic cell survival.

Tavernier SJ, Osorio F, Vandersarren L, Vetters J, Vanlangenakker N, Van Isterdael G, Vergote K, De Rycke R, Parthoens E, van de Laar L, Iwawaki T, Del Valle JR, Hu CC, Lambrecht BN, Janssens S.

Nat Cell Biol. 2017 Jun;19(6):698-710. doi: 10.1038/ncb3518. Epub 2017 May 1.

9.

IRF8 Transcription Factor Controls Survival and Function of Terminally Differentiated Conventional and Plasmacytoid Dendritic Cells, Respectively.

Sichien D, Scott CL, Martens L, Vanderkerken M, Van Gassen S, Plantinga M, Joeris T, De Prijck S, Vanhoutte L, Vanheerswynghels M, Van Isterdael G, Toussaint W, Madeira FB, Vergote K, Agace WW, Clausen BE, Hammad H, Dalod M, Saeys Y, Lambrecht BN, Guilliams M.

Immunity. 2016 Sep 20;45(3):626-640. doi: 10.1016/j.immuni.2016.08.013. Epub 2016 Sep 13.

10.

A siRNA screen reveals the prosurvival effect of protein kinase A activation in conditions of unresolved endoplasmic reticulum stress.

Aguileta MA, Rojas-Rivera D, Goossens V, Estornes Y, Van Isterdael G, Vandenabeele P, Bertrand MJ.

Cell Death Differ. 2016 Oct;23(10):1670-80. doi: 10.1038/cdd.2016.59. Epub 2016 Jun 24.

11.

The transcription factor Zeb2 regulates development of conventional and plasmacytoid DCs by repressing Id2.

Scott CL, Soen B, Martens L, Skrypek N, Saelens W, Taminau J, Blancke G, Van Isterdael G, Huylebroeck D, Haigh J, Saeys Y, Guilliams M, Lambrecht BN, Berx G.

J Exp Med. 2016 May 30;213(6):897-911. doi: 10.1084/jem.20151715. Epub 2016 May 16.

12.

Yolk Sac Macrophages, Fetal Liver, and Adult Monocytes Can Colonize an Empty Niche and Develop into Functional Tissue-Resident Macrophages.

van de Laar L, Saelens W, De Prijck S, Martens L, Scott CL, Van Isterdael G, Hoffmann E, Beyaert R, Saeys Y, Lambrecht BN, Guilliams M.

Immunity. 2016 Apr 19;44(4):755-68. doi: 10.1016/j.immuni.2016.02.017. Epub 2016 Mar 15.

13.

Mitochondria-associated membranes as hubs for neurodegeneration.

Krols M, van Isterdael G, Asselbergh B, Kremer A, Lippens S, Timmerman V, Janssens S.

Acta Neuropathol. 2016 Apr;131(4):505-23. doi: 10.1007/s00401-015-1528-7. Epub 2016 Jan 7. Review.

14.

A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development.

Chen Q, Liu Y, Maere S, Lee E, Van Isterdael G, Xie Z, Xuan W, Lucas J, Vassileva V, Kitakura S, Marhavý P, Wabnik K, Geldner N, Benková E, Le J, Fukaki H, Grotewold E, Li C, Friml J, Sack F, Beeckman T, Vanneste S.

Nat Commun. 2015 Nov 18;6:8821. doi: 10.1038/ncomms9821.

15.

Ethylene-Mediated Regulation of A2-Type CYCLINs Modulates Hyponastic Growth in Arabidopsis.

Polko JK, van Rooij JA, Vanneste S, Pierik R, Ammerlaan AM, Vergeer-van Eijk MH, McLoughlin F, Gühl K, Van Isterdael G, Voesenek LA, Millenaar FF, Beeckman T, Peeters AJ, Marée AF, van Zanten M.

Plant Physiol. 2015 Sep;169(1):194-208. doi: 10.1104/pp.15.00343. Epub 2015 Jun 3.

16.

Root Cap-Derived Auxin Pre-patterns the Longitudinal Axis of the Arabidopsis Root.

Xuan W, Audenaert D, Parizot B, Möller BK, Njo MF, De Rybel B, De Rop G, Van Isterdael G, Mähönen AP, Vanneste S, Beeckman T.

Curr Biol. 2015 May 18;25(10):1381-8. doi: 10.1016/j.cub.2015.03.046. Epub 2015 May 7.

17.

NBPF1, a tumor suppressor candidate in neuroblastoma, exerts growth inhibitory effects by inducing a G1 cell cycle arrest.

Andries V, Vandepoele K, Staes K, Berx G, Bogaert P, Van Isterdael G, Ginneberge D, Parthoens E, Vandenbussche J, Gevaert K, van Roy F.

BMC Cancer. 2015 May 10;15:391. doi: 10.1186/s12885-015-1408-5.

18.

Plant development. Integration of growth and patterning during vascular tissue formation in Arabidopsis.

De Rybel B, Adibi M, Breda AS, Wendrich JR, Smit ME, Novák O, Yamaguchi N, Yoshida S, Van Isterdael G, Palovaara J, Nijsse B, Boekschoten MV, Hooiveld G, Beeckman T, Wagner D, Ljung K, Fleck C, Weijers D.

Science. 2014 Aug 8;345(6197):1255215. doi: 10.1126/science.1255215.

19.

Plant development. Arabidopsis NAC45/86 direct sieve element morphogenesis culminating in enucleation.

Furuta KM, Yadav SR, Lehesranta S, Belevich I, Miyashima S, Heo JO, Vatén A, Lindgren O, De Rybel B, Van Isterdael G, Somervuo P, Lichtenberger R, Rocha R, Thitamadee S, Tähtiharju S, Auvinen P, Beeckman T, Jokitalo E, Helariutta Y.

Science. 2014 Aug 22;345(6199):933-7. doi: 10.1126/science.1253736. Epub 2014 Jul 31.

20.

The Cyclin-Dependent Kinase Inhibitor KRP6 Induces Mitosis and Impairs Cytokinesis in Giant Cells Induced by Plant-Parasitic Nematodes in Arabidopsis.

Vieira P, De Clercq A, Stals H, Van Leene J, Van De Slijke E, Van Isterdael G, Eeckhout D, Persiau G, Van Damme D, Verkest A, Antonino de Souza JD, Júnior, Glab N, Abad P, Engler G, Inzé D, De Veylder L, De Jaeger G, Engler JD.

Plant Cell. 2014 Jun;26(6):2633-2647. Epub 2014 Jun 24.

21.

The Emerging Role of Reactive Oxygen Species Signaling during Lateral Root Development.

Manzano C, Pallero-Baena M, Casimiro I, De Rybel B, Orman-Ligeza B, Van Isterdael G, Beeckman T, Draye X, Casero P, Del Pozo JC.

Plant Physiol. 2014 Jul;165(3):1105-1119. Epub 2014 May 30.

22.

Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis.

Vanneste S, Coppens F, Lee E, Donner TJ, Xie Z, Van Isterdael G, Dhondt S, De Winter F, De Rybel B, Vuylsteke M, De Veylder L, Friml J, Inzé D, Grotewold E, Scarpella E, Sack F, Beemster GT, Beeckman T.

EMBO J. 2011 Jul 19;30(16):3430-41. doi: 10.1038/emboj.2011.240.

23.

Isolation of transcription factor complexes from Arabidopsis cell suspension cultures by tandem affinity purification.

Van Leene J, Eeckhout D, Persiau G, Van De Slijke E, Geerinck J, Van Isterdael G, Witters E, De Jaeger G.

Methods Mol Biol. 2011;754:195-218. doi: 10.1007/978-1-61779-154-3_11.

PMID:
21720954
24.

The Arabidopsis thaliana checkpoint kinase WEE1 protects against premature vascular differentiation during replication stress.

Cools T, Iantcheva A, Weimer AK, Boens S, Takahashi N, Maes S, Van den Daele H, Van Isterdael G, Schnittger A, De Veylder L.

Plant Cell. 2011 Apr;23(4):1435-48. doi: 10.1105/tpc.110.082768. Epub 2011 Apr 15.

25.

A novel aux/IAA28 signaling cascade activates GATA23-dependent specification of lateral root founder cell identity.

De Rybel B, Vassileva V, Parizot B, Demeulenaere M, Grunewald W, Audenaert D, Van Campenhout J, Overvoorde P, Jansen L, Vanneste S, Möller B, Wilson M, Holman T, Van Isterdael G, Brunoud G, Vuylsteke M, Vernoux T, De Veylder L, Inzé D, Weijers D, Bennett MJ, Beeckman T.

Curr Biol. 2010 Oct 12;20(19):1697-706. doi: 10.1016/j.cub.2010.09.007. Epub 2010 Sep 30.

26.

The roots of a new green revolution.

Den Herder G, Van Isterdael G, Beeckman T, De Smet I.

Trends Plant Sci. 2010 Nov;15(11):600-7. doi: 10.1016/j.tplants.2010.08.009. Epub 2010 Sep 17.

PMID:
20851036
27.

Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana.

Van Leene J, Hollunder J, Eeckhout D, Persiau G, Van De Slijke E, Stals H, Van Isterdael G, Verkest A, Neirynck S, Buffel Y, De Bodt S, Maere S, Laukens K, Pharazyn A, Ferreira PC, Eloy N, Renne C, Meyer C, Faure JD, Steinbrenner J, Beynon J, Larkin JC, Van de Peer Y, Hilson P, Kuiper M, De Veylder L, Van Onckelen H, Inzé D, Witters E, De Jaeger G.

Mol Syst Biol. 2010 Aug 10;6:397. doi: 10.1038/msb.2010.53.

28.

Manipulation of auxin transport in plant roots during Rhizobium symbiosis and nematode parasitism.

Grunewald W, van Noorden G, Van Isterdael G, Beeckman T, Gheysen G, Mathesius U.

Plant Cell. 2009 Sep;21(9):2553-62. doi: 10.1105/tpc.109.069617. Epub 2009 Sep 29. Review.

29.

CDKB1;1 forms a functional complex with CYCA2;3 to suppress endocycle onset.

Boudolf V, Lammens T, Boruc J, Van Leene J, Van Den Daele H, Maes S, Van Isterdael G, Russinova E, Kondorosi E, Witters E, De Jaeger G, Inzé D, De Veylder L.

Plant Physiol. 2009 Jul;150(3):1482-93. doi: 10.1104/pp.109.140269. Epub 2009 May 20.

30.

Receptor-like kinase ACR4 restricts formative cell divisions in the Arabidopsis root.

De Smet I, Vassileva V, De Rybel B, Levesque MP, Grunewald W, Van Damme D, Van Noorden G, Naudts M, Van Isterdael G, De Clercq R, Wang JY, Meuli N, Vanneste S, Friml J, Hilson P, Jürgens G, Ingram GC, Inzé D, Benfey PN, Beeckman T.

Science. 2008 Oct 24;322(5901):594-7. doi: 10.1126/science.1160158.

31.

A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana.

Van Leene J, Stals H, Eeckhout D, Persiau G, Van De Slijke E, Van Isterdael G, De Clercq A, Bonnet E, Laukens K, Remmerie N, Henderickx K, De Vijlder T, Abdelkrim A, Pharazyn A, Van Onckelen H, Inzé D, Witters E, De Jaeger G.

Mol Cell Proteomics. 2007 Jul;6(7):1226-38. Epub 2007 Apr 9.

32.

Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana.

Vanneste S, De Rybel B, Beemster GT, Ljung K, De Smet I, Van Isterdael G, Naudts M, Iida R, Gruissem W, Tasaka M, Inzé D, Fukaki H, Beeckman T.

Plant Cell. 2005 Nov;17(11):3035-50. Epub 2005 Oct 21.

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