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Items: 1 to 50 of 246

1.

Iterative fully convolutional neural networks for automatic vertebra segmentation and identification.

Lessmann N, van Ginneken B, de Jong PA, Išgum I.

Med Image Anal. 2019 Feb 12;53:142-155. doi: 10.1016/j.media.2019.02.005. [Epub ahead of print]

PMID:
30771712
2.

From Detection of Individual Metastases to Classification of Lymph Node Status at the Patient Level: The CAMELYON17 Challenge.

Bandi P, Geessink O, Manson Q, Van Dijk M, Balkenhol M, Hermsen M, Ehteshami Bejnordi B, Lee B, Paeng K, Zhong A, Li Q, Zanjani FG, Zinger S, Fukuta K, Komura D, Ovtcharov V, Cheng S, Zeng S, Thagaard J, Dahl AB, Lin H, Chen H, Jacobsson L, Hedlund M, Cetin M, Halici E, Jackson H, Chen R, Both F, Franke J, Kusters-Vandevelde H, Vreuls W, Bult P, van Ginneken B, van der Laak J, Litjens G.

IEEE Trans Med Imaging. 2019 Feb;38(2):550-560. doi: 10.1109/TMI.2018.2867350.

PMID:
30716025
3.

Author Correction: Why rankings of biomedical image analysis competitions should be interpreted with care.

Maier-Hein L, Eisenmann M, Reinke A, Onogur S, Stankovic M, Scholz P, Arbel T, Bogunovic H, Bradley AP, Carass A, Feldmann C, Frangi AF, Full PM, van Ginneken B, Hanbury A, Honauer K, Kozubek M, Landman BA, März K, Maier O, Maier-Hein K, Menze BH, Müller H, Neher PF, Niessen W, Rajpoot N, Sharp GC, Sirinukunwattana K, Speidel S, Stock C, Stoyanov D, Taha AA, van der Sommen F, Wang CW, Weber MA, Zheng G, Jannin P, Kopp-Schneider A.

Nat Commun. 2019 Jan 30;10(1):588. doi: 10.1038/s41467-019-08563-w.

4.

Airway wall thickening on CT: Relation to smoking status and severity of COPD.

Charbonnier JP, Pompe E, Moore C, Humphries S, van Ginneken B, Make B, Regan E, Crapo JD, van Rikxoort EM, Lynch DA; COPDGene investigators.

Respir Med. 2019 Jan;146:36-41. doi: 10.1016/j.rmed.2018.11.014. Epub 2018 Nov 20.

PMID:
30665516
5.

Sex Differences in Coronary Artery and Thoracic Aorta Calcification and Their Association With Cardiovascular Mortality in Heavy Smokers.

Lessmann N, de Jong PA, Celeng C, Takx RAP, Viergever MA, van Ginneken B, Išgum I.

JACC Cardiovasc Imaging. 2019 Jan 16. pii: S1936-878X(18)31040-4. doi: 10.1016/j.jcmg.2018.10.026. [Epub ahead of print]

PMID:
30660540
6.

Automated Fetal Head Detection and Circumference Estimation from Free-Hand Ultrasound Sweeps Using Deep Learning in Resource-Limited Countries.

van den Heuvel TLA, Petros H, Santini S, de Korte CL, van Ginneken B.

Ultrasound Med Biol. 2019 Mar;45(3):773-785. doi: 10.1016/j.ultrasmedbio.2018.09.015. Epub 2018 Dec 17.

PMID:
30573305
7.

Why rankings of biomedical image analysis competitions should be interpreted with care.

Maier-Hein L, Eisenmann M, Reinke A, Onogur S, Stankovic M, Scholz P, Arbel T, Bogunovic H, Bradley AP, Carass A, Feldmann C, Frangi AF, Full PM, van Ginneken B, Hanbury A, Honauer K, Kozubek M, Landman BA, März K, Maier O, Maier-Hein K, Menze BH, Müller H, Neher PF, Niessen W, Rajpoot N, Sharp GC, Sirinukunwattana K, Speidel S, Stock C, Stoyanov D, Taha AA, van der Sommen F, Wang CW, Weber MA, Zheng G, Jannin P, Kopp-Schneider A.

Nat Commun. 2018 Dec 6;9(1):5217. doi: 10.1038/s41467-018-07619-7. Erratum in: Nat Commun. 2019 Jan 30;10(1):588.

8.
9.

Deep Learning for Triage of Chest Radiographs: Should Every Institution Train Its Own System?

van Ginneken B.

Radiology. 2019 Feb;290(2):545-546. doi: 10.1148/radiol.2018182318. Epub 2018 Nov 13. No abstract available.

PMID:
30422089
10.

Predicting Malignancy Risk of Screen-Detected Lung Nodules-Mean Diameter or Volume.

Tammemagi M, Ritchie AJ, Atkar-Khattra S, Dougherty B, Sanghera C, Mayo JR, Yuan R, Manos D, McWilliams AM, Schmidt H, Gingras M, Pasian S, Stewart L, Tsai S, Seely JM, Burrowes P, Bhatia R, Haider EA, Boylan C, Jacobs C, van Ginneken B, Tsao MS, Lam S; Pan-Canadian Early Detection of Lung Cancer Study Group.

J Thorac Oncol. 2019 Feb;14(2):203-211. doi: 10.1016/j.jtho.2018.10.006. Epub 2018 Oct 25.

PMID:
30368011
11.

Eight respectively nine out of ten patients return to sport and work after distal femoral osteotomy.

Hoorntje A, van Ginneken BT, Kuijer PPFM, Koenraadt KLM, van Geenen RCI, Kerkhoffs GMMJ, van Heerwaarden RJ.

Knee Surg Sports Traumatol Arthrosc. 2018 Oct 22. doi: 10.1007/s00167-018-5206-x. [Epub ahead of print]

PMID:
30349947
12.

Automatic liver tumor segmentation in CT with fully convolutional neural networks and object-based postprocessing.

Chlebus G, Schenk A, Moltz JH, van Ginneken B, Hahn HK, Meine H.

Sci Rep. 2018 Oct 19;8(1):15497. doi: 10.1038/s41598-018-33860-7.

13.

Evaluation of the diagnostic accuracy of Computer-Aided Detection of tuberculosis on Chest radiography among private sector patients in Pakistan.

Zaidi SMA, Habib SS, Van Ginneken B, Ferrand RA, Creswell J, Khowaja S, Khan A.

Sci Rep. 2018 Aug 17;8(1):12339. doi: 10.1038/s41598-018-30810-1.

14.

Comparison Study of Low-Cost Ultrasound Devices for Estimation of Gestational Age in Resource-Limited Countries.

van den Heuvel TLA, de Bruijn D, Moens-van de Moesdijk D, Beverdam A, van Ginneken B, de Korte CL.

Ultrasound Med Biol. 2018 Nov;44(11):2250-2260. doi: 10.1016/j.ultrasmedbio.2018.05.023. Epub 2018 Aug 6.

PMID:
30093339
15.

Computer-assisted chest radiography reading for tuberculosis screening in people living with diabetes mellitus.

Koesoemadinata RC, Kranzer K, Livia R, Susilawati N, Annisa J, Soetedjo NNM, Ruslami R, Philipsen R, van Ginneken B, Soetikno RD, van Crevel R, Alisjahbana B, Hill PC.

Int J Tuberc Lung Dis. 2018 Sep 1;22(9):1088-1094. doi: 10.5588/ijtld.17.0827.

PMID:
30092877
16.

Observer variability for Lung-RADS categorisation of lung cancer screening CTs: impact on patient management.

van Riel SJ, Jacobs C, Scholten ET, Wittenberg R, Winkler Wille MM, de Hoop B, Sprengers R, Mets OM, Geurts B, Prokop M, Schaefer-Prokop C, van Ginneken B.

Eur Radiol. 2019 Feb;29(2):924-931. doi: 10.1007/s00330-018-5599-4. Epub 2018 Jul 31.

17.

Long-Term Active Surveillance of Screening Detected Subsolid Nodules is a Safe Strategy to Reduce Overtreatment.

Silva M, Prokop M, Jacobs C, Capretti G, Sverzellati N, Ciompi F, van Ginneken B, Schaefer-Prokop CM, Galeone C, Marchianò A, Pastorino U.

J Thorac Oncol. 2018 Oct;13(10):1454-1463. doi: 10.1016/j.jtho.2018.06.013. Epub 2018 Jul 16.

PMID:
30026071
18.

Small airway segmentation in thoracic computed tomography scans: a machine learning approach.

Bian Z, Charbonnier JP, Liu J, Zhao D, Lynch DA, van Ginneken B.

Phys Med Biol. 2018 Aug 6;63(15):155024. doi: 10.1088/1361-6560/aad2a1.

PMID:
29995646
19.

Classification of CT Pulmonary Opacities as Perifissural Nodules: Reader Variability.

Schreuder A, van Ginneken B, Scholten ET, Jacobs C, Prokop M, Sverzellati N, Desai SR, Devaraj A, Schaefer-Prokop CM.

Radiology. 2018 Sep;288(3):867-875. doi: 10.1148/radiol.2018172771. Epub 2018 Jul 3.

PMID:
29969076
20.

Using deep convolutional neural networks to identify and classify tumor-associated stroma in diagnostic breast biopsies.

Ehteshami Bejnordi B, Mullooly M, Pfeiffer RM, Fan S, Vacek PM, Weaver DL, Herschorn S, Brinton LA, van Ginneken B, Karssemeijer N, Beck AH, Gierach GL, van der Laak JAWM, Sherman ME.

Mod Pathol. 2018 Oct;31(10):1502-1512. doi: 10.1038/s41379-018-0073-z. Epub 2018 Jun 13.

PMID:
29899550
21.

Brock malignancy risk calculator for pulmonary nodules: validation outside a lung cancer screening population.

Chung K, Mets OM, Gerke PK, Jacobs C, den Harder AM, Scholten ET, Prokop M, de Jong PA, van Ginneken B, Schaefer-Prokop CM.

Thorax. 2018 Sep;73(9):857-863. doi: 10.1136/thoraxjnl-2017-211372. Epub 2018 May 18.

PMID:
29777062
22.

Author Correction: White Matter and Gray Matter Segmentation in 4D Computed Tomography.

Manniesing R, Oei MTH, Oostveen LJ, Melendez J, Smit EJ, Platel B, Sánchez CI, Meijer FJA, Prokop M, van Ginneken B.

Sci Rep. 2018 May 15;8(1):7889. doi: 10.1038/s41598-018-25729-6.

23.

Deep learning approach for the detection and quantification of intraretinal cystoid fluid in multivendor optical coherence tomography.

Venhuizen FG, van Ginneken B, Liefers B, van Asten F, Schreur V, Fauser S, Hoyng C, Theelen T, Sánchez CI.

Biomed Opt Express. 2018 Mar 7;9(4):1545-1569. doi: 10.1364/BOE.9.001545. eCollection 2018 Apr 1.

24.

Accuracy of an automated system for tuberculosis detection on chest radiographs in high-risk screening.

Melendez J, Hogeweg L, Sánchez CI, Philipsen RHHM, Aldridge RW, Hayward AC, Abubakar I, van Ginneken B, Story A.

Int J Tuberc Lung Dis. 2018 May 1;22(5):567-571. doi: 10.5588/ijtld.17.0492.

25.

In vivo growth of 60 non-screening detected lung cancers: a computed tomography study.

Mets OM, Chung K, Zanen P, Scholten ET, Veldhuis WB, van Ginneken B, Prokop M, Schaefer-Prokop CM, de Jong PA.

Eur Respir J. 2018 Apr 12;51(4). pii: 1702183. doi: 10.1183/13993003.02183-2017. Print 2018 Apr.

PMID:
29650547
26.

Lung cancer risk to personalise annual and biennial follow-up computed tomography screening.

Schreuder A, Schaefer-Prokop CM, Scholten ET, Jacobs C, Prokop M, van Ginneken B.

Thorax. 2018 Mar 30. pii: thoraxjnl-2017-211107. doi: 10.1136/thoraxjnl-2017-211107. [Epub ahead of print]

PMID:
29602813
27.

Detection of Subsolid Nodules in Lung Cancer Screening: Complementary Sensitivity of Visual Reading and Computer-Aided Diagnosis.

Silva M, Schaefer-Prokop CM, Jacobs C, Capretti G, Ciompi F, van Ginneken B, Pastorino U, Sverzellati N.

Invest Radiol. 2018 Aug;53(8):441-449. doi: 10.1097/RLI.0000000000000464.

PMID:
29543693
28.

Efficient organ localization using multi-label convolutional neural networks in thorax-abdomen CT scans.

Humpire-Mamani GE, Setio AAA, van Ginneken B, Jacobs C.

Phys Med Biol. 2018 Apr 5;63(8):085003. doi: 10.1088/1361-6560/aab4b3.

PMID:
29512516
29.

Visual discrimination of screen-detected persistent from transient subsolid nodules: An observer study.

Chung K, Ciompi F, Scholten ET, Goo JM, Prokop M, Jacobs C, van Ginneken B, Schaefer-Prokop CM.

PLoS One. 2018 Feb 13;13(2):e0191874. doi: 10.1371/journal.pone.0191874. eCollection 2018.

30.

Automatic Calcium Scoring in Low-Dose Chest CT Using Deep Neural Networks With Dilated Convolutions.

Lessmann N, van Ginneken B, Zreik M, de Jong PA, de Vos BD, Viergever MA, Isgum I.

IEEE Trans Med Imaging. 2018 Feb;37(2):615-625. doi: 10.1109/TMI.2017.2769839.

PMID:
29408789
31.

Automatic segmentation of the solid core and enclosed vessels in subsolid pulmonary nodules.

Charbonnier JP, Chung K, Scholten ET, van Rikxoort EM, Jacobs C, Sverzellati N, Silva M, Pastorino U, van Ginneken B, Ciompi F.

Sci Rep. 2018 Jan 12;8(1):646. doi: 10.1038/s41598-017-19101-3.

32.

Context-aware stacked convolutional neural networks for classification of breast carcinomas in whole-slide histopathology images.

Bejnordi BE, Zuidhof G, Balkenhol M, Hermsen M, Bult P, van Ginneken B, Karssemeijer N, Litjens G, van der Laak J.

J Med Imaging (Bellingham). 2017 Oct;4(4):044504. doi: 10.1117/1.JMI.4.4.044504. Epub 2017 Dec 14.

33.

Diagnostic Assessment of Deep Learning Algorithms for Detection of Lymph Node Metastases in Women With Breast Cancer.

Ehteshami Bejnordi B, Veta M, Johannes van Diest P, van Ginneken B, Karssemeijer N, Litjens G, van der Laak JAWM; the CAMELYON16 Consortium, Hermsen M, Manson QF, Balkenhol M, Geessink O, Stathonikos N, van Dijk MC, Bult P, Beca F, Beck AH, Wang D, Khosla A, Gargeya R, Irshad H, Zhong A, Dou Q, Li Q, Chen H, Lin HJ, Heng PA, Haß C, Bruni E, Wong Q, Halici U, Öner MÜ, Cetin-Atalay R, Berseth M, Khvatkov V, Vylegzhanin A, Kraus O, Shaban M, Rajpoot N, Awan R, Sirinukunwattana K, Qaiser T, Tsang YW, Tellez D, Annuscheit J, Hufnagl P, Valkonen M, Kartasalo K, Latonen L, Ruusuvuori P, Liimatainen K, Albarqouni S, Mungal B, George A, Demirci S, Navab N, Watanabe S, Seno S, Takenaka Y, Matsuda H, Ahmady Phoulady H, Kovalev V, Kalinovsky A, Liauchuk V, Bueno G, Fernandez-Carrobles MM, Serrano I, Deniz O, Racoceanu D, Venâncio R.

JAMA. 2017 Dec 12;318(22):2199-2210. doi: 10.1001/jama.2017.14585.

34.

Normalized emphysema scores on low dose CT: Validation as an imaging biomarker for mortality.

Gallardo-Estrella L, Pompe E, de Jong PA, Jacobs C, van Rikxoort EM, Prokop M, Sánchez CI, van Ginneken B.

PLoS One. 2017 Dec 11;12(12):e0188902. doi: 10.1371/journal.pone.0188902. eCollection 2017.

35.

Automatic detection of the foveal center in optical coherence tomography.

Liefers B, Venhuizen FG, Schreur V, van Ginneken B, Hoyng C, Fauser S, Theelen T, Sánchez CI.

Biomed Opt Express. 2017 Oct 23;8(11):5160-5178. doi: 10.1364/BOE.8.005160. eCollection 2017 Nov 1.

36.

Robust Segmentation of the Full Cerebral Vasculature in 4D CT of Suspected Stroke Patients.

Meijs M, Patel A, van de Leemput SC, Prokop M, van Dijk EJ, de Leeuw FE, Meijer FJA, van Ginneken B, Manniesing R.

Sci Rep. 2017 Nov 15;7(1):15622. doi: 10.1038/s41598-017-15617-w.

37.

Malignancy risk estimation of pulmonary nodules in screening CTs: Comparison between a computer model and human observers.

van Riel SJ, Ciompi F, Winkler Wille MM, Dirksen A, Lam S, Scholten ET, Rossi SE, Sverzellati N, Naqibullah M, Wittenberg R, Hovinga-de Boer MC, Snoeren M, Peters-Bax L, Mets O, Brink M, Prokop M, Schaefer-Prokop C, van Ginneken B.

PLoS One. 2017 Nov 9;12(11):e0185032. doi: 10.1371/journal.pone.0185032. eCollection 2017.

38.

Incidental perifissural nodules on routine chest computed tomography: lung cancer or not?

Mets OM, Chung K, Scholten ET, Veldhuis WB, Prokop M, van Ginneken B, Schaefer-Prokop CM, de Jong PA.

Eur Radiol. 2018 Mar;28(3):1095-1101. doi: 10.1007/s00330-017-5055-x. Epub 2017 Oct 6.

39.

Corrigendum: Towards automatic pulmonary nodule management in lung cancer screening with deep learning.

Ciompi F, Chung K, van Riel SJ, Setio AAA, Gerke PK, Jacobs C, Scholten ET, Schaefer-Prokop C, Wille MMW, Marchianò A, Pastorino U, Prokop M, van Ginneken B.

Sci Rep. 2017 Sep 7;7:46878. doi: 10.1038/srep46878.

40.

Diagnostics in tarsal fusion: The theory and practise in The Netherlands.

Stegeman M, van Ginneken BTJ, Romijn MG, Castelein RM, Louwerens JWK.

Foot Ankle Surg. 2017 Sep;23(3):201-206. doi: 10.1016/j.fas.2016.05.319. Epub 2016 May 26.

PMID:
28865591
41.

Use of Volumetry for Lung Nodule Management: Theory and Practice.

Devaraj A, van Ginneken B, Nair A, Baldwin D.

Radiology. 2017 Sep;284(3):630-644. doi: 10.1148/radiol.2017151022. Review.

PMID:
28825886
42.

Automatic versus human reading of chest X-rays in the Zambia National Tuberculosis Prevalence Survey.

Melendez J, Philipsen RHHM, Chanda-Kapata P, Sunkutu V, Kapata N, van Ginneken B.

Int J Tuberc Lung Dis. 2017 Aug 1;21(8):880-886. doi: 10.5588/ijtld.16.0851.

PMID:
28786796
43.

A survey on deep learning in medical image analysis.

Litjens G, Kooi T, Bejnordi BE, Setio AAA, Ciompi F, Ghafoorian M, van der Laak JAWM, van Ginneken B, Sánchez CI.

Med Image Anal. 2017 Dec;42:60-88. doi: 10.1016/j.media.2017.07.005. Epub 2017 Jul 26. Review.

PMID:
28778026
44.

Robust total retina thickness segmentation in optical coherence tomography images using convolutional neural networks.

Venhuizen FG, van Ginneken B, Liefers B, van Grinsven MJJP, Fauser S, Hoyng C, Theelen T, Sánchez CI.

Biomed Opt Express. 2017 Jun 16;8(7):3292-3316. doi: 10.1364/BOE.8.003292. eCollection 2017 Jul 1.

45.

Location Sensitive Deep Convolutional Neural Networks for Segmentation of White Matter Hyperintensities.

Ghafoorian M, Karssemeijer N, Heskes T, van Uden IWM, Sanchez CI, Litjens G, de Leeuw FE, van Ginneken B, Marchiori E, Platel B.

Sci Rep. 2017 Jul 11;7(1):5110. doi: 10.1038/s41598-017-05300-5.

46.

Fast interactive segmentation of the pulmonary lobes from thoracic computed tomography data.

Lassen-Schmidt BC, Kuhnigk JM, Konrad O, van Ginneken B, van Rikxoort EM.

Phys Med Biol. 2017 Jul 31;62(16):6649-6665. doi: 10.1088/1361-6560/aa7674.

PMID:
28570264
47.

Malignancy estimation of Lung-RADS criteria for subsolid nodules on CT: accuracy of low and high risk spectrum when using NLST nodules.

Chung K, Jacobs C, Scholten ET, Mets OM, Dekker I, Prokop M, van Ginneken B, Schaefer-Prokop CM.

Eur Radiol. 2017 Nov;27(11):4672-4679. doi: 10.1007/s00330-017-4842-8. Epub 2017 Apr 24.

48.

Automated Staging of Age-Related Macular Degeneration Using Optical Coherence Tomography.

Venhuizen FG, van Ginneken B, van Asten F, van Grinsven MJJP, Fauser S, Hoyng CB, Theelen T, Sánchez CI.

Invest Ophthalmol Vis Sci. 2017 Apr 1;58(4):2318-2328. doi: 10.1167/iovs.16-20541.

PMID:
28437528
49.

Computed tomographic findings in subjects who died from respiratory disease in the National Lung Screening Trial.

Pompe E, de Jong PA, Lynch DA, Lessmann N, Išgum I, van Ginneken B, Lammers JJ, Mohamed Hoesein FAA.

Eur Respir J. 2017 Apr 19;49(4). pii: 1601814. doi: 10.1183/13993003.01814-2016. Print 2017 Apr.

50.

Computed tomography quantification of tracheal abnormalities in COPD and their influence on airflow limitation.

Gallardo Estrella L, Pompe E, Kuhnigk JM, Lynch DA, Bhatt SP, van Ginneken B, van Rikxoort EM.

Med Phys. 2017 Jul;44(7):3594-3603. doi: 10.1002/mp.12274. Epub 2017 May 22.

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