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Items: 38

1.

SNPSelect: A scalable and flexible targeted sequence-based genotyping solution.

Hogers RCJ, de Ruiter M, Huvenaars KHJ, van der Poel H, Janssen A, van Eijk MJT, van Orsouw NJ.

PLoS One. 2018 Oct 12;13(10):e0205577. doi: 10.1371/journal.pone.0205577. eCollection 2018.

2.

Genome sequence of the progenitor of wheat A subgenome Triticum urartu.

Ling HQ, Ma B, Shi X, Liu H, Dong L, Sun H, Cao Y, Gao Q, Zheng S, Li Y, Yu Y, Du H, Qi M, Li Y, Lu H, Yu H, Cui Y, Wang N, Chen C, Wu H, Zhao Y, Zhang J, Li Y, Zhou W, Zhang B, Hu W, van Eijk MJT, Tang J, Witsenboer HMA, Zhao S, Li Z, Zhang A, Wang D, Liang C.

Nature. 2018 May;557(7705):424-428. doi: 10.1038/s41586-018-0108-0. Epub 2018 May 9.

PMID:
29743678
3.

Whole genome profiling physical map and ancestral annotation of tobacco Hicks Broadleaf.

Sierro N, van Oeveren J, van Eijk MJ, Martin F, Stormo KE, Peitsch MC, Ivanov NV.

Plant J. 2013 Sep;75(5):880-9. doi: 10.1111/tpj.12247. Epub 2013 Jun 26.

4.

Sequence-based genotyping for marker discovery and co-dominant scoring in germplasm and populations.

Truong HT, Ramos AM, Yalcin F, de Ruiter M, van der Poel HJ, Huvenaars KH, Hogers RC, van Enckevort LJ, Janssen A, van Orsouw NJ, van Eijk MJ.

PLoS One. 2012;7(5):e37565. doi: 10.1371/journal.pone.0037565. Epub 2012 May 25.

5.

Whole Genome Profiling provides a robust framework for physical mapping and sequencing in the highly complex and repetitive wheat genome.

Philippe R, Choulet F, Paux E, van Oeveren J, Tang J, Wittenberg AH, Janssen A, van Eijk MJ, Stormo K, Alberti A, Wincker P, Akhunov E, van der Vossen E, Feuillet C.

BMC Genomics. 2012 Jan 30;13:47. doi: 10.1186/1471-2164-13-47.

6.

Sequence-based physical mapping of complex genomes by whole genome profiling.

van Oeveren J, de Ruiter M, Jesse T, van der Poel H, Tang J, Yalcin F, Janssen A, Volpin H, Stormo KE, Bogden R, van Eijk MJ, Prins M.

Genome Res. 2011 Apr;21(4):618-25. doi: 10.1101/gr.112094.110. Epub 2011 Feb 1.

7.

High-throughput detection of induced mutations and natural variation using KeyPoint technology.

Rigola D, van Oeveren J, Janssen A, Bonné A, Schneiders H, van der Poel HJ, van Orsouw NJ, Hogers RC, de Both MT, van Eijk MJ.

PLoS One. 2009;4(3):e4761. doi: 10.1371/journal.pone.0004761. Epub 2009 Mar 13.

8.

Assessment of AFLP marker behaviour in enriching STS radiation hybrid maps.

Ajmone Marsan P, Gorni C, Milanesi E, Mazza R, van Eijk MJ, Peleman JD, Williams JL.

Anim Genet. 2008 Aug;39(4):383-94. doi: 10.1111/j.1365-2052.2008.01747.x. Epub 2008 Jun 28.

PMID:
18573125
9.

Generation of a 3D indexed Petunia insertion database for reverse genetics.

Vandenbussche M, Janssen A, Zethof J, van Orsouw N, Peters J, van Eijk MJ, Rijpkema AS, Schneiders H, Santhanam P, de Been M, van Tunen A, Gerats T.

Plant J. 2008 Jun;54(6):1105-14. doi: 10.1111/j.1365-313X.2008.03482.x. Epub 2008 Mar 13.

10.

Complexity reduction of polymorphic sequences (CRoPS): a novel approach for large-scale polymorphism discovery in complex genomes.

van Orsouw NJ, Hogers RC, Janssen A, Yalcin F, Snoeijers S, Verstege E, Schneiders H, van der Poel H, van Oeveren J, Verstegen H, van Eijk MJ.

PLoS One. 2007 Nov 14;2(11):e1172.

11.

AFLP-based transcript profiling (cDNA-AFLP) for genome-wide expression analysis.

Vuylsteke M, Peleman JD, van Eijk MJ.

Nat Protoc. 2007;2(6):1399-413.

PMID:
17545977
12.

AFLP technology for DNA fingerprinting.

Vuylsteke M, Peleman JD, van Eijk MJ.

Nat Protoc. 2007;2(6):1387-98.

PMID:
17545976
13.

New Arabidopsis recombinant inbred line populations genotyped using SNPWave and their use for mapping flowering-time quantitative trait loci.

el-Lithy ME, Bentsink L, Hanhart CJ, Ruys GJ, Rovito D, Broekhof JL, van der Poel HJ, van Eijk MJ, Vreugdenhil D, Koornneef M.

Genetics. 2006 Mar;172(3):1867-76. Epub 2005 Dec 15.

14.

Characterization of mutations in ATP8B1 associated with hereditary cholestasis.

Klomp LW, Vargas JC, van Mil SW, Pawlikowska L, Strautnieks SS, van Eijk MJ, Juijn JA, Pabón-Peña C, Smith LB, DeYoung JA, Byrne JA, Gombert J, van der Brugge G, Berger R, Jankowska I, Pawlowska J, Villa E, Knisely AS, Thompson RJ, Freimer NB, Houwen RH, Bull LN.

Hepatology. 2004 Jul;40(1):27-38.

PMID:
15239083
15.

Application of AFLP technology to radiation hybrid mapping.

Gorni C, Williams JL, Heuven HC, Negrini R, Valentini A, van Eijk MJ, Waddington D, Zevenbergen M, Marsan PA, Peleman JD.

Chromosome Res. 2004;12(3):285-97.

PMID:
15125642
16.

SNPWave: a flexible multiplexed SNP genotyping technology.

van Eijk MJ, Broekhof JL, van der Poel HJ, Hogers RC, Schneiders H, Kamerbeek J, Verstege E, van Aart JW, Geerlings H, Buntjer JB, van Oeveren AJ, Vos P.

Nucleic Acids Res. 2004 Mar 5;32(4):e47.

17.

Discrimination between selected lines of pigs using AFLP markers.

Cameron ND, van Eijk MJ, Brugmans B, Peleman J.

Heredity (Edinb). 2003 Nov;91(5):494-501.

18.

The gene for human TATA-binding-protein-associated factor (TAFII) 170: structure, promoter and chromosomal localization.

Van Der Knaap JA, Van Den Boom V, Kuipers J, Van Eijk MJ, Van Der Vliet PC, Timmers HT.

Biochem J. 2000 Feb 1;345 Pt 3:521-7.

19.

Fine-resolution mapping by haplotype evaluation: the examples of PFIC1 and BRIC.

Bull LN, Juijn JA, Liao M, van Eijk MJ, Sinke RJ, Stricker NL, DeYoung JA, Carlton VE, Baharloo S, Klomp LW, Abukawa D, Barton DE, Bass NM, Bourke B, Drumm B, Jankowska I, Lovisetto P, McQuaid S, Pawlowska J, Tazawa Y, Villa E, Tygstrup N, Berger R, Knisely AS, Freimer NB, et al.

Hum Genet. 1999 Mar;104(3):241-8. Erratum in: Hum Genet 1999 Jun;104(6):528.

PMID:
10323248
20.

Molecular cloning, genetic mapping, and developmental expression of bovine POU5F1.

van Eijk MJ, van Rooijen MA, Modina S, Scesi L, Folkers G, van Tol HT, Bevers MM, Fisher SR, Lewin HA, Rakacolli D, Galli C, de Vaureix C, Trounson AO, Mummery CL, Gandolfi F.

Biol Reprod. 1999 May;60(5):1093-103.

PMID:
10208969
21.

Comparative analysis of 82 expressed sequence tags from a cattle ovary cDNA library.

Ma RZ, van Eijk MJ, Beever JE, Guérin G, Mummery CL, Lewin HA.

Mamm Genome. 1998 Jul;9(7):545-9.

PMID:
9657852
22.

A gene encoding a P-type ATPase mutated in two forms of hereditary cholestasis.

Bull LN, van Eijk MJ, Pawlikowska L, DeYoung JA, Juijn JA, Liao M, Klomp LW, Lomri N, Berger R, Scharschmidt BF, Knisely AS, Houwen RH, Freimer NB.

Nat Genet. 1998 Mar;18(3):219-24.

PMID:
9500542
23.

Molecular cloning, genetic mapping, and developmental expression of a bovine transforming growth factor beta (TGF-beta) type I receptor.

Roelen BA, Van Eijk MJ, Van Rooijen MA, Bevers MM, Larson JH, Lewin HA, Mummery CL.

Mol Reprod Dev. 1998 Jan;49(1):1-9.

PMID:
9406190
24.

Analysis of expression of cMOAT (MRP2), MRP3, MRP4, and MRP5, homologues of the multidrug resistance-associated protein gene (MRP1), in human cancer cell lines.

Kool M, de Haas M, Scheffer GL, Scheper RJ, van Eijk MJ, Juijn JA, Baas F, Borst P.

Cancer Res. 1997 Aug 15;57(16):3537-47.

25.

Association of BoLA class II haplotypes with subclinical progression of bovine leukaemia virus infection in Holstein-Friesian cattle.

Zanotti M, Poli G, Ponti W, Polli M, Rocchi M, Bolzani E, Longeri M, Russo S, Lewin HA, van Eijk MJ.

Anim Genet. 1996 Oct;27(5):337-41.

PMID:
8930075
26.

Influence of FSH and hCG on the resumption of meiosis of bovine oocytes surrounded by cumulus cells connected to membrana granulosa.

van Tol HT, van Eijk MJ, Mummery CL, van den Hurk R, Bevers MM.

Mol Reprod Dev. 1996 Oct;45(2):218-24.

PMID:
8914080
27.

Expression of leukaemia inhibitory factor receptor subunits LIFR beta and gp130 in human oocytes and preimplantation embryos.

van Eijk MJ, Mandelbaum J, Salat-Baroux J, Belaisch-Allart J, Plachot M, Junca AM, Mummery CL.

Mol Hum Reprod. 1996 May;2(5):355-60.

PMID:
9238703
28.

Competitive reverse transcription-polymerase chain reaction for quantitation of feline immunodeficiency virus.

Vahlenkamp TW, Egberink HF, van Eijk MJ, Slotboom-Kamphorst AM, Verschoor EJ, Horzinek MC, de Ronde A.

J Virol Methods. 1995 Apr;52(3):335-46.

PMID:
7601907
29.

(R)-9-(2-phosphonylmethoxypropyl)-2,6-diaminopurine is a potent inhibitor of feline immunodeficiency virus infection.

Vahlenkamp TW, De Ronde A, Balzarini J, Naesens L, De Clercq E, van Eijk MJ, Horzinek MC, Egberink HF.

Antimicrob Agents Chemother. 1995 Mar;39(3):746-9.

30.

Genetic mapping of BoLA-A, CYP21, DRB3, DYA, and PRL on BTA23.

van Eijk MJ, Beever JE, Da Y, Stewart JA, Nicholaides GE, Green CA, Lewin HA.

Mamm Genome. 1995 Feb;6(2):151-2. No abstract available.

PMID:
7767004
31.

Genetic mapping of the LMP2 proteasome subunit gene to the BoLA class IIb region.

Shalhevet D, Da Y, Beever JE, van Eijk MJ, Ma R, Lewin HA, Gaskins HR.

Immunogenetics. 1995;41(1):44-6. No abstract available.

PMID:
7806274
32.

Polymorphism of bovine MHC class II genes. Joint report of the Fifth International Bovine Lymphocyte Antigen (BoLA) Workshop, Interlaken, Switzerland, 1 August 1992.

Davies CJ, Joosten I, Andersson L, Arriens MA, Bernoco D, Bissumbhar B, Byrns G, van Eijk MJ, Kristensen B, Lewin HA, et al.

Eur J Immunogenet. 1994 Aug;21(4):259-89.

PMID:
9098438
33.
34.

Order of bovine DRB3, DYA, and PRL determined by sperm typing.

van Eijk MJ, Russ I, Lewin HA.

Mamm Genome. 1993;4(2):113-8.

PMID:
8431635
35.

Close linkage between bovine prolactin and BoLA-DRB3 genes: genetic mapping in cattle by single sperm typing.

Lewin HA, Schmitt K, Hubert R, van Eijk MJ, Arnheim N.

Genomics. 1992 May;13(1):44-8.

PMID:
1577492
36.

Development of persistent lymphocytosis in cattle is closely associated with DRB2.

van Eijk MJ, Stewart-Haynes JA, Beever JE, Fernando RL, Lewin HA.

Immunogenetics. 1992;37(1):64-8. No abstract available.

PMID:
1428013
37.

Polymorphism in exon 2 of the bovine lymphocyte antigen (BoLA)-DYA gene.

van Eijk MJ, Russ I, Beever JE, Lewin HA.

Anim Genet. 1992;23(5):476. No abstract available.

PMID:
1416256
38.

Extensive polymorphism of the BoLA-DRB3 gene distinguished by PCR-RFLP.

van Eijk MJ, Stewart-Haynes JA, Lewin HA.

Anim Genet. 1992;23(6):483-96.

PMID:
1362859

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