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Items: 49

1.

High accuracy, fiducial marker-based image registration of correlative microscopy images.

Mohammadian S, Fokkema J, Agronskaia AV, Liv N, de Heus C, van Donselaar E, Blab GA, Klumperman J, Gerritsen HC.

Sci Rep. 2019 Mar 1;9(1):3211. doi: 10.1038/s41598-019-40098-4.

2.

Extremely thin layer plastification for focused-ion beam scanning electron microscopy: an improved method to study cell surfaces and organelles of cultured cells.

VAN Donselaar EG, Dorresteijn B, Popov-Čeleketić D, VAN DE Wetering WJ, Verrips TC, Boekhout T, Schneijdenberg CTWM, Xenaki AT, VAN DER Krift TP, Müller WH.

J Microsc. 2018 Jun;270(3):359-373. doi: 10.1111/jmi.12694. Epub 2018 Mar 25.

PMID:
29574724
3.

Single organelle dynamics linked to 3D structure by correlative live-cell imaging and 3D electron microscopy.

Fermie J, Liv N, Ten Brink C, van Donselaar EG, Müller WH, Schieber NL, Schwab Y, Gerritsen HC, Klumperman J.

Traffic. 2018 May;19(5):354-369. doi: 10.1111/tra.12557. Epub 2018 Mar 25.

4.

A novel immuno-gold labeling protocol for nanobody-based detection of HER2 in breast cancer cells using immuno-electron microscopy.

Kijanka M, van Donselaar EG, Müller WH, Dorresteijn B, Popov-Čeleketić D, El Khattabi M, Verrips CT, van Bergen En Henegouwen PMP, Post JA.

J Struct Biol. 2017 Jul;199(1):1-11. doi: 10.1016/j.jsb.2017.05.008. Epub 2017 May 25.

5.

VIS2FIX: rapid chemical fixation of vitreous sections for immuno-electron microscopy.

Karreman MA, van Donselaar EG.

Methods Mol Biol. 2014;1174:297-314. doi: 10.1007/978-1-4939-0944-5_21.

PMID:
24947391
6.

Tissue-type plasminogen activator binds to Aβ and AIAPP amyloid fibrils with multiple domains.

Beringer DX, Fischer MJ, Meeldijk JD, van Donselaar EG, de Mol NJ, Kroon-Batenburg LM.

Amyloid. 2013 Jun;20(2):113-21. doi: 10.3109/13506129.2013.791810.

PMID:
23697555
7.

Novel contrasting and labeling procedures for correlative microscopy of thawed cryosections.

Karreman MA, Van Donselaar EG, Agronskaia AV, Verrips CT, Gerritsen HC.

J Histochem Cytochem. 2013 Mar;61(3):236-47. doi: 10.1369/0022155412473756. Epub 2012 Dec 20.

8.

Optimizing immuno-labeling for correlative fluorescence and electron microscopy on a single specimen.

Karreman MA, Agronskaia AV, van Donselaar EG, Vocking K, Fereidouni F, Humbel BM, Verrips CT, Verkleij AJ, Gerritsen HC.

J Struct Biol. 2012 Nov;180(2):382-6. doi: 10.1016/j.jsb.2012.09.002. Epub 2012 Sep 13.

PMID:
22982545
9.

Co-localization of particulate methane monooxygenase and cd1 nitrite reductase in the denitrifying methanotroph 'Candidatus Methylomirabilis oxyfera'.

Wu ML, van Alen TA, van Donselaar EG, Strous M, Jetten MS, van Niftrik L.

FEMS Microbiol Lett. 2012 Sep;334(1):49-56. doi: 10.1111/j.1574-6968.2012.02615.x.

10.

Inhibition of protein kinase B activity induces cell cycle arrest and apoptosis during early G₁ phase in CHO cells.

van Opstal A, Bijvelt J, van Donselaar E, Humbel BM, Boonstra J.

Cell Biol Int. 2012 Apr 1;36(4):357-65. doi: 10.1042/CBI20110092.

PMID:
22251027
11.

Ultrastructure of the denitrifying methanotroph "Candidatus Methylomirabilis oxyfera," a novel polygon-shaped bacterium.

Wu ML, van Teeseling MC, Willems MJ, van Donselaar EG, Klingl A, Rachel R, Geerts WJ, Jetten MS, Strous M, van Niftrik L.

J Bacteriol. 2012 Jan;194(2):284-91. doi: 10.1128/JB.05816-11. Epub 2011 Oct 21.

12.

Cobblestone HUVECs: a human model system for studying primary ciliogenesis.

Geerts WJ, Vocking K, Schoonen N, Haarbosch L, van Donselaar EG, Regan-Klapisz E, Post JA.

J Struct Biol. 2011 Dec;176(3):350-9. doi: 10.1016/j.jsb.2011.09.013. Epub 2011 Oct 8.

PMID:
22001693
13.

Detection, isolation, and characterization of acidophilic methanotrophs from Sphagnum mosses.

Kip N, Ouyang W, van Winden J, Raghoebarsing A, van Niftrik L, Pol A, Pan Y, Bodrossy L, van Donselaar EG, Reichart GJ, Jetten MS, Damsté JS, Op den Camp HJ.

Appl Environ Microbiol. 2011 Aug 15;77(16):5643-54. doi: 10.1128/AEM.05017-11. Epub 2011 Jul 1.

14.

VIS2FIX: a high-speed fixation method for immuno-electron microscopy.

Karreman MA, van Donselaar EG, Gerritsen HC, Verrips CT, Verkleij AJ.

Traffic. 2011 Jul;12(7):806-14. doi: 10.1111/j.1600-0854.2011.01199.x. Epub 2011 Apr 28.

15.

Intracellular localization of membrane-bound ATPases in the compartmentalized anammox bacterium 'Candidatus Kuenenia stuttgartiensis'.

van Niftrik L, van Helden M, Kirchen S, van Donselaar EG, Harhangi HR, Webb RI, Fuerst JA, Op den Camp HJ, Jetten MS, Strous M.

Mol Microbiol. 2010 Aug;77(3):701-15. doi: 10.1111/j.1365-2958.2010.07242.x. Epub 2010 Jun 9.

16.

Gridded Aclar: preparation methods and use for correlative light and electron microscopy of cell monolayers, by TEM and FIB-SEM.

Jiménez N, Van Donselaar EG, De Winter DA, Vocking K, Verkleij AJ, Post JA.

J Microsc. 2010 Feb;237(2):208-20. doi: 10.1111/j.1365-2818.2009.03329.x.

17.

The septal pore cap is an organelle that functions in vegetative growth and mushroom formation of the wood-rot fungus Schizophyllum commune.

van Peer AF, Wang F, van Driel KG, de Jong JF, van Donselaar EG, Müller WH, Boekhout T, Lugones LG, Wösten HA.

Environ Microbiol. 2010 Apr;12(4):833-44. doi: 10.1111/j.1462-2920.2009.02122.x. Epub 2009 Dec 27.

PMID:
20050873
18.

Extracellular matrix formation after transplantation of human embryonic stem cell-derived cardiomyocytes.

van Laake LW, van Donselaar EG, Monshouwer-Kloots J, Schreurs C, Passier R, Humbel BM, Doevendans PA, Sonnenberg A, Verkleij AJ, Mummery CL.

Cell Mol Life Sci. 2010 Jan;67(2):277-90. doi: 10.1007/s00018-009-0179-z. Epub 2009 Oct 22.

19.

Cell division ring, a new cell division protein and vertical inheritance of a bacterial organelle in anammox planctomycetes.

van Niftrik L, Geerts WJ, van Donselaar EG, Humbel BM, Webb RI, Harhangi HR, Camp HJ, Fuerst JA, Verkleij AJ, Jetten MS, Strous M.

Mol Microbiol. 2009 Sep;73(6):1009-19. doi: 10.1111/j.1365-2958.2009.06841.x. Epub 2009 Aug 24.

20.

Induced membrane domains as visualized by electron tomography and template matching.

Lebbink MN, van Donselaar E, Humbel BM, Hertzberger LO, Post JA, Verkleij AJ.

J Struct Biol. 2009 May;166(2):156-61.

PMID:
19374016
21.

Tannic acid-mediated osmium impregnation after freeze-substitution: a strategy to enhance membrane contrast for electron tomography.

Jiménez N, Vocking K, van Donselaar EG, Humbel BM, Post JA, Verkleij AJ.

J Struct Biol. 2009 Apr;166(1):103-6. doi: 10.1016/j.jsb.2008.12.009. Epub 2008 Dec 30.

PMID:
19162195
22.

Enrichment and characterization of marine anammox bacteria associated with global nitrogen gas production.

van de Vossenberg J, Rattray JE, Geerts W, Kartal B, van Niftrik L, van Donselaar EG, Sinninghe Damsté JS, Strous M, Jetten MS.

Environ Microbiol. 2008 Nov;10(11):3120-9. doi: 10.1111/j.1462-2920.2008.01643.x. Epub 2008 May 6.

PMID:
18462401
23.

Linking ultrastructure and function in four genera of anaerobic ammonium-oxidizing bacteria: cell plan, glycogen storage, and localization of cytochrome C proteins.

van Niftrik L, Geerts WJ, van Donselaar EG, Humbel BM, Webb RI, Fuerst JA, Verkleij AJ, Jetten MS, Strous M.

J Bacteriol. 2008 Jan;190(2):708-17. Epub 2007 Nov 9.

24.

Combined structural and chemical analysis of the anammoxosome: a membrane-bounded intracytoplasmic compartment in anammox bacteria.

van Niftrik L, Geerts WJ, van Donselaar EG, Humbel BM, Yakushevska A, Verkleij AJ, Jetten MS, Strous M.

J Struct Biol. 2008 Mar;161(3):401-10. Epub 2007 Jun 2.

PMID:
17604181
25.

STEM tomography in cell biology.

Yakushevska AE, Lebbink MN, Geerts WJ, Spek L, van Donselaar EG, Jansen KA, Humbel BM, Post JA, Verkleij AJ, Koster AJ.

J Struct Biol. 2007 Sep;159(3):381-91. Epub 2007 Apr 30.

PMID:
17600727
26.

Immunogold labeling of cryosections from high-pressure frozen cells.

van Donselaar E, Posthuma G, Zeuschner D, Humbel BM, Slot JW.

Traffic. 2007 May;8(5):471-85.

27.

Degradation of the hexose transporter Hxt5p in Saccharomyces cerevisiae.

van Suylekom D, van Donselaar E, Blanchetot C, Do Ngoc LN, Humbel BM, Boonstra J.

Biol Cell. 2007 Jan;99(1):13-23.

PMID:
16928197
28.

Subcellular localization of tyrosine-nitrated proteins is dictated by reactive oxygen species generating enzymes and by proximity to nitric oxide synthase.

Heijnen HF, van Donselaar E, Slot JW, Fries DM, Blachard-Fillion B, Hodara R, Lightfoot R, Polydoro M, Spielberg D, Thomson L, Regan EA, Crapo J, Ischiropoulos H.

Free Radic Biol Med. 2006 Jun 1;40(11):1903-13. Epub 2005 Nov 15.

PMID:
16716892
29.

Aclar discs: a versatile substrate for routine high-pressure freezing of mammalian cell monolayers.

Jiménez N, Humbel BM, van Donselaar E, Verkleij AJ, Burger KN.

J Microsc. 2006 Mar;221(Pt 3):216-23.

30.

Immuno-electron tomography of ER exit sites reveals the existence of free COPII-coated transport carriers.

Zeuschner D, Geerts WJ, van Donselaar E, Humbel BM, Slot JW, Koster AJ, Klumperman J.

Nat Cell Biol. 2006 Apr;8(4):377-83. Epub 2006 Mar 12.

PMID:
16531996
31.

Trafficking of prion proteins through a caveolae-mediated endosomal pathway.

Peters PJ, Mironov A Jr, Peretz D, van Donselaar E, Leclerc E, Erpel S, DeArmond SJ, Burton DR, Williamson RA, Vey M, Prusiner SB.

J Cell Biol. 2003 Aug 18;162(4):703-17.

32.

Recycling compartments and the internal vesicles of multivesicular bodies harbor most of the cholesterol found in the endocytic pathway.

Möbius W, van Donselaar E, Ohno-Iwashita Y, Shimada Y, Heijnen HF, Slot JW, Geuze HJ.

Traffic. 2003 Apr;4(4):222-31.

33.

The melanocytic protein Melan-A/MART-1 has a subcellular localization distinct from typical melanosomal proteins.

De Mazière AM, Muehlethaler K, van Donselaar E, Salvi S, Davoust J, Cerottini JC, Lévy F, Slot JW, Rimoldi D.

Traffic. 2002 Sep;3(9):678-93.

34.

Endothelial nitric oxide synthase and its negative regulator caveolin-1 localize to distinct perinuclear organelles.

Govers R, van der Sluijs P, van Donselaar E, Slot JW, Rabelink TJ.

J Histochem Cytochem. 2002 Jun;50(6):779-88.

PMID:
12019294
35.

Immunoelectron microscopic localization of cholesterol using biotinylated and non-cytolytic perfringolysin O.

Möbius W, Ohno-Iwashita Y, van Donselaar EG, Oorschot VM, Shimada Y, Fujimoto T, Heijnen HF, Geuze HJ, Slot JW.

J Histochem Cytochem. 2002 Jan;50(1):43-55.

PMID:
11748293
36.

Characterization of coated vesicles that participate in endocytic recycling.

Peters PJ, Gao M, Gaschet J, Ambach A, van Donselaar E, Traverse JF, Bos E, Wolffe EJ, Hsu VW.

Traffic. 2001 Dec;2(12):885-95.

37.

Subcellular distribution of CFTR in rat intestine supports a physiologic role for CFTR regulation by vesicle traffic.

Ameen NA, van Donselaar E, Posthuma G, de Jonge H, McLaughlin G, Geuze HJ, Marino C, Peters PJ.

Histochem Cell Biol. 2000 Sep;114(3):219-28.

PMID:
11083465
38.

Self-recognition of CD1 by gamma/delta T cells: implications for innate immunity.

Spada FM, Grant EP, Peters PJ, Sugita M, Melián A, Leslie DS, Lee HK, van Donselaar E, Hanson DA, Krensky AM, Majdic O, Porcelli SA, Morita CT, Brenner MB.

J Exp Med. 2000 Mar 20;191(6):937-48.

39.

Separate pathways for antigen presentation by CD1 molecules.

Sugita M, Grant EP, van Donselaar E, Hsu VW, Rogers RA, Peters PJ, Brenner MB.

Immunity. 1999 Dec;11(6):743-52.

40.

EFA6, a sec7 domain-containing exchange factor for ARF6, coordinates membrane recycling and actin cytoskeleton organization.

Franco M, Peters PJ, Boretto J, van Donselaar E, Neri A, D'Souza-Schorey C, Chavrier P.

EMBO J. 1999 Mar 15;18(6):1480-91.

41.

Depletion of epithelial stem-cell compartments in the small intestine of mice lacking Tcf-4.

Korinek V, Barker N, Moerer P, van Donselaar E, Huls G, Peters PJ, Clevers H.

Nat Genet. 1998 Aug;19(4):379-83.

PMID:
9697701
42.

Identification of a putative alpha-glucan synthase essential for cell wall construction and morphogenesis in fission yeast.

Hochstenbach F, Klis FM, van den Ende H, van Donselaar E, Peters PJ, Klausner RD.

Proc Natl Acad Sci U S A. 1998 Aug 4;95(16):9161-6.

43.

Modulation of intracellular transport by transported proteins: insight from regulation of COPI-mediated transport.

Aoe T, Lee AJ, van Donselaar E, Peters PJ, Hsu VW.

Proc Natl Acad Sci U S A. 1998 Feb 17;95(4):1624-9.

44.

ARF6 targets recycling vesicles to the plasma membrane: insights from an ultrastructural investigation.

D'Souza-Schorey C, van Donselaar E, Hsu VW, Yang C, Stahl PD, Peters PJ.

J Cell Biol. 1998 Feb 9;140(3):603-16.

45.

Cell-type and tissue-specific expression of caveolin-2. Caveolins 1 and 2 co-localize and form a stable hetero-oligomeric complex in vivo.

Scherer PE, Lewis RY, Volonte D, Engelman JA, Galbiati F, Couet J, Kohtz DS, van Donselaar E, Peters P, Lisanti MP.

J Biol Chem. 1997 Nov 14;272(46):29337-46.

46.

Cytoplasmic tail-dependent localization of CD1b antigen-presenting molecules to MIICs.

Sugita M, Jackman RM, van Donselaar E, Behar SM, Rogers RA, Peters PJ, Brenner MB, Porcelli SA.

Science. 1996 Jul 19;273(5273):349-52.

PMID:
8662520
47.

An acidic sequence within the cytoplasmic domain of furin functions as a determinant of trans-Golgi network localization and internalization from the cell surface.

Voorhees P, Deignan E, van Donselaar E, Humphrey J, Marks MS, Peters PJ, Bonifacino JS.

EMBO J. 1995 Oct 16;14(20):4961-75.

48.

A lysosomal targeting signal in the cytoplasmic tail of the beta chain directs HLA-DM to MHC class II compartments.

Marks MS, Roche PA, van Donselaar E, Woodruff L, Peters PJ, Bonifacino JS.

J Cell Biol. 1995 Oct;131(2):351-69.

49.

Effects of cadmium in freshwater clams. II. Ultrastructural changes in the renal system ofAnodonta cygnea.

Hemelraad J, Herwig HJ, van Donselaar EG, Holwerda DA, Zandee DI.

Arch Environ Contam Toxicol. 1990 Sep-Oct;19(5):691-8. doi: 10.1007/BF01183986.

PMID:
21318500

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