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Items: 1 to 50 of 82

1.

Virus goes viral: an educational kit for virology classes.

de Souza GAP, Queiroz VF, Lima MT, de Sousa Reis EV, Coelho LFL, Abrahão JS.

Virol J. 2020 Jan 31;17(1):13. doi: 10.1186/s12985-020-1291-9.

2.

Proteomic and Metabolomic Analysis of Azospirillum brasilense ntrC Mutant under High and Low Nitrogen Conditions.

Kukolj C, Pedrosa FO, de Souza GA, Sumner LW, Lei Z, Sumner B, do Amaral FP, Juexin W, Trupti J, Huergo LF, Monteiro RA, Valdameri G, Stacey G, de Souza EM.

J Proteome Res. 2020 Jan 3;19(1):92-105. doi: 10.1021/acs.jproteome.9b00397. Epub 2019 Oct 25.

PMID:
31599156
3.

On the Impact of the Pangenome and Annotation Discrepancies While Building Protein Sequence Databases for Bacteria Proteogenomics.

Machado KCT, Fortuin S, Tomazella GG, Fonseca AF, Warren RM, Wiker HG, de Souza SJ, de Souza GA.

Front Microbiol. 2019 Jun 20;10:1410. doi: 10.3389/fmicb.2019.01410. eCollection 2019.

4.

Persistence of intrathecal oligoclonal B cells and IgG in multiple sclerosis.

Tomescu-Baciu A, Johansen JN, Holmøy T, Greiff V, Stensland M, de Souza GA, Vartdal F, Lossius A.

J Neuroimmunol. 2019 Aug 15;333:576966. doi: 10.1016/j.jneuroim.2019.576966. Epub 2019 May 16.

PMID:
31153015
5.

The cardiac syndecan-4 interactome reveals a role for syndecan-4 in nuclear translocation of muscle LIM protein (MLP).

Mathiesen SB, Lunde M, Aronsen JM, Romaine A, Kaupang A, Martinsen M, de Souza GA, Nyman TA, Sjaastad I, Christensen G, Carlson CR.

J Biol Chem. 2019 May 31;294(22):8717-8731. doi: 10.1074/jbc.RA118.006423. Epub 2019 Apr 9.

PMID:
30967474
6.

Psychological aspects and quality of life in Medical Residency.

Abreu-Reis P, Oldoni C, de-Souza GAL, Bettega AL, Góes MN, Sarquis LM, Brunello LFS, Tomasich FS, Collaço IA, Nasr A.

Rev Col Bras Cir. 2019 Mar 21;46(1):e2050. doi: 10.1590/0100-6991e-20192050. Portuguese, English.

7.

Discovery of novel dual-active 3-(4-(dimethylamino)phenyl)-7-aminoalcoxy-coumarin as potent and selective acetylcholinesterase inhibitor and antioxidant.

de Souza GA, da Silva SJ, Del Cistia CN, Pitasse-Santos P, Pires LO, Passos YM, Cordeiro Y, Cardoso CM, Castro RN, Sant'Anna CMR, Kümmerle AE.

J Enzyme Inhib Med Chem. 2019 Dec;34(1):631-637. doi: 10.1080/14756366.2019.1571270.

8.

A high-throughput pipeline for validation of antibodies.

Sikorski K, Mehta A, Inngjerdingen M, Thakor F, Kling S, Kalina T, Nyman TA, Stensland ME, Zhou W, de Souza GA, Holden L, Stuchly J, Templin M, Lund-Johansen F.

Nat Methods. 2018 Nov;15(11):909-912. doi: 10.1038/s41592-018-0179-8. Epub 2018 Oct 30.

PMID:
30377371
9.

Bovine serum albumin nanoparticles induce histopathological changes and inflammatory cell recruitment in the skin of treated mice.

da Silva NIO, Salvador EA, Rodrigues Franco I, de Souza GAP, de Souza Morais SM, Prado Rocha R, Dias Novaes R, Paiva Corsetti P, Malaquias LCC, Leomil Coelho LF.

Biomed Pharmacother. 2018 Nov;107:1311-1317. doi: 10.1016/j.biopha.2018.08.106. Epub 2018 Aug 29.

PMID:
30257346
10.

Salt stress inhibits germination of Stylosanthes humilis seeds through abscisic acid accumulation and associated changes in ethylene production.

Silva NCQ, de Souza GA, Pimenta TM, Brito FAL, Picoli EAT, Zsögön A, Ribeiro DM.

Plant Physiol Biochem. 2018 Sep;130:399-407. doi: 10.1016/j.plaphy.2018.07.025. Epub 2018 Jul 25.

PMID:
30064096
11.

Potential of cassava clones enriched with β-carotene and lycopene for zinc biofortification under different soil Zn conditions.

Corguinha APB, Carvalho CA, de Souza GA, de Carvalho TS, Vieira EA, Fialho JF, Guilherme LRG.

J Sci Food Agric. 2019 Jan 30;99(2):666-674. doi: 10.1002/jsfa.9231. Epub 2018 Aug 22.

PMID:
29962086
12.

Characterization of the Small Intestinal Lesion in Celiac Disease by Label-Free Quantitative Mass Spectrometry.

Tutturen AEV, Dørum S, Clancy T, Reims HM, Christophersen A, Lundin KEA, Sollid LM, de Souza GA, Stamnaes J.

Am J Pathol. 2018 Jul;188(7):1563-1579. doi: 10.1016/j.ajpath.2018.03.017. Epub 2018 Apr 22.

13.

Protein Tyrosine Phosphatase Receptor Type G (PTPRG) Controls Fibroblast Growth Factor Receptor (FGFR) 1 Activity and Influences Sensitivity to FGFR Kinase Inhibitors.

Kostas M, Haugsten EM, Zhen Y, Sørensen V, Szybowska P, Fiorito E, Lorenz S, Jones N, de Souza GA, Wiedlocha A, Wesche J.

Mol Cell Proteomics. 2018 May;17(5):850-870. doi: 10.1074/mcp.RA117.000538. Epub 2018 Jan 25.

14.

Proteome analysis of an Escherichia coli ptsN-null strain under different nitrogen regimes.

Gravina F, Sanchuki HS, Rodrigues TE, Gerhardt ECM, Pedrosa FO, Souza EM, Valdameri G, de Souza GA, Huergo LF.

J Proteomics. 2018 Mar 1;174:28-35. doi: 10.1016/j.jprot.2017.12.006. Epub 2017 Dec 21.

PMID:
29274402
15.

Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis.

da Silva VL, Fonseca AF, Fonseca M, da Silva TE, Coelho AC, Kroll JE, de Souza JES, Stransky B, de Souza GA, de Souza SJ.

Oncotarget. 2017 Oct 10;8(54):92966-92977. doi: 10.18632/oncotarget.21715. eCollection 2017 Nov 3.

16.

High prevalence of dengue antibodies and the arginine variant of the FcγRIIa polymorphism in asymptomatic individuals in a population of Minas Gerais State, Southeast Brazil.

Pereira ACTDC, de Siqueira TR, de Oliveira Prado AA, da Silva CAV, de Fátima Silva Moraes T, Aleixo AA, de Magalhaes JC, de Souza GAP, Drumond BP, Ferreira GP, de Mello Silva B, de Brito Magalhães CL, Santos LL, Ferreira JMS, Malaquias LCC, Coelho LFL.

Immunogenetics. 2018 Jun;70(6):355-362. doi: 10.1007/s00251-017-1046-y. Epub 2017 Nov 21.

PMID:
29164277
17.

Renal Amyloidosis Associated With 5 Novel Variants in the Fibrinogen A Alpha Chain Protein.

Rowczenio D, Stensland M, de Souza GA, Strøm EH, Gilbertson JA, Taylor G, Rendell N, Minogue S, Efebera YA, Lachmann HJ, Wechalekar AD, Hawkins PN, Heimdal KR, Selvig K, Lægreid IK, Demoulin N, Aydin S, Gillmore JD, Wien TN.

Kidney Int Rep. 2016 Nov 19;2(3):461-469. doi: 10.1016/j.ekir.2016.11.005. eCollection 2017 May.

18.

The proteome of pus from human brain abscesses: host-derived neurotoxic proteins and the cell-type diversity of CNS pus.

Hassel B, De Souza GA, Stensland ME, Ivanovic J, Voie Ø, Dahlberg D.

J Neurosurg. 2018 Sep;129(3):829-837. doi: 10.3171/2017.4.JNS17284. Epub 2017 Oct 20.

PMID:
29053067
19.

Sugar metabolism and developmental stages of rubber tree (Hevea brasiliensis L.) seeds.

de Souza GA, Dos Santos Dias DCF, Pimenta TM, Almeida AL, de Toledo Picoli EA, de Pádua Alvarenga A, da Silva JCF.

Physiol Plant. 2018 Apr;162(4):495-505. doi: 10.1111/ppl.12650. Epub 2017 Dec 12.

PMID:
28991376
20.

The SysteMHC Atlas project.

Shao W, Pedrioli PGA, Wolski W, Scurtescu C, Schmid E, Vizcaíno JA, Courcelles M, Schuster H, Kowalewski D, Marino F, Arlehamn CSL, Vaughan K, Peters B, Sette A, Ottenhoff THM, Meijgaarden KE, Nieuwenhuizen N, Kaufmann SHE, Schlapbach R, Castle JC, Nesvizhskii AI, Nielsen M, Deutsch EW, Campbell DS, Moritz RL, Zubarev RA, Ytterberg AJ, Purcell AW, Marcilla M, Paradela A, Wang Q, Costello CE, Ternette N, van Veelen PA, van Els CACM, Heck AJR, de Souza GA, Sollid LM, Admon A, Stevanovic S, Rammensee HG, Thibault P, Perreault C, Bassani-Sternberg M, Aebersold R, Caron E.

Nucleic Acids Res. 2018 Jan 4;46(D1):D1237-D1247. doi: 10.1093/nar/gkx664.

21.

Strong Clonal Relatedness between Serum and Gut IgA despite Different Plasma Cell Origins.

Iversen R, Snir O, Stensland M, Kroll JE, Steinsbø Ø, Korponay-Szabó IR, Lundin KEA, de Souza GA, Sollid LM.

Cell Rep. 2017 Sep 5;20(10):2357-2367. doi: 10.1016/j.celrep.2017.08.036.

22.

Mapping the in vitro interactome of cardiac sodium (Na+ )-calcium (Ca2+ ) exchanger 1 (NCX1).

Lubelwana Hafver T, Wanichawan P, Manfra O, de Souza GA, Lunde M, Martinsen M, Louch WE, Sejersted OM, Carlson CR.

Proteomics. 2017 Sep;17(17-18). doi: 10.1002/pmic.201600417.

PMID:
28755400
23.
24.

Accumulation of prohibitin is a common cellular response to different stressing stimuli and protects melanoma cells from ER stress and chemotherapy-induced cell death.

Tortelli TC Junior, de Godoy LMF, de Souza GA, Bonatto D, Otake AH, de Freitas Saito R, Rosa JC, Greene LJ, Chammas R.

Oncotarget. 2017 Jun 27;8(26):43114-43129. doi: 10.18632/oncotarget.17810.

25.

In vitro and in vivo antimalarial potential of oleoresin obtained from Copaifera reticulata Ducke (Fabaceae) in the Brazilian Amazon rainforest.

de Souza GA, da Silva NC, de Souza J, de Oliveira KR, da Fonseca AL, Baratto LC, de Oliveira EC, Varotti FP, Moraes WP.

Phytomedicine. 2017 Jan 15;24:111-118. doi: 10.1016/j.phymed.2016.11.021. Epub 2016 Dec 1.

PMID:
28160850
26.

Dynamics of the Escherichia coli proteome in response to nitrogen starvation and entry into the stationary phase.

Sanchuki HB, Gravina F, Rodrigues TE, Gerhardt EC, Pedrosa FO, Souza EM, Raittz RT, Valdameri G, de Souza GA, Huergo LF.

Biochim Biophys Acta Proteins Proteom. 2017 Mar;1865(3):344-352. doi: 10.1016/j.bbapap.2016.12.002. Epub 2016 Dec 8.

PMID:
27939605
27.
28.

microRNA-140 Inhibits Inflammation and Stimulates Chondrogenesis in a Model of Interleukin 1β-induced Osteoarthritis.

Karlsen TA, de Souza GA, Ødegaard B, Engebretsen L, Brinchmann JE.

Mol Ther Nucleic Acids. 2016 Oct 11;5(10):e373. doi: 10.1038/mtna.2016.64.

29.

Comparative protein profiling of B16 mouse melanoma cells susceptible and non-susceptible to alphavirus infection: Effect of the tumor microenvironment.

Vasilevska J, De Souza GA, Stensland M, Skrastina D, Zhulenvovs D, Paplausks R, Kurena B, Kozlovska T, Zajakina A.

Cancer Biol Ther. 2016 Oct 2;17(10):1035-1050. doi: 10.1080/15384047.2016.1219813. Epub 2016 Sep 16. Erratum in: Cancer Biol Ther. 2017 Jan 2;18(1):76.

30.

Proximity Labeling Reveals Molecular Determinants of FGFR4 Endosomal Transport.

Haugsten EM, Sørensen V, Kunova Bosakova M, de Souza GA, Krejci P, Wiedlocha A, Wesche J.

J Proteome Res. 2016 Oct 7;15(10):3841-3855. Epub 2016 Sep 26.

PMID:
27615514
31.

MetaMass, a tool for meta-analysis of subcellular proteomics data.

Lund-Johansen F, de la Rosa Carrillo D, Mehta A, Sikorski K, Inngjerdingen M, Kalina T, Røysland K, de Souza GA, Bradbury AR, Lecrevisse Q, Stuchly J.

Nat Methods. 2016 Oct;13(10):837-40. doi: 10.1038/nmeth.3967. Epub 2016 Aug 29.

PMID:
27571551
32.

Gluten-specific antibodies of celiac disease gut plasma cells recognize long proteolytic fragments that typically harbor T-cell epitopes.

Dørum S, Steinsbø Ø, Bergseng E, Arntzen MØ, de Souza GA, Sollid LM.

Sci Rep. 2016 May 5;6:25565. doi: 10.1038/srep25565.

33.

Label-free based quantitative proteomics analysis of primary neonatal porcine Leydig cells exposed to the persistent contaminant 3-methylsulfonyl-DDE.

Kalayou S, Granum C, Berntsen HF, Groseth PK, Verhaegen S, Connolly L, Brandt I, de Souza GA, Ropstad E.

J Proteomics. 2016 Mar 30;137:68-82. doi: 10.1016/j.jprot.2015.12.007. Epub 2015 Dec 9.

PMID:
26691841
34.

Quantitative Proteomics of Gut-Derived Th1 and Th1/Th17 Clones Reveal the Presence of CD28+ NKG2D- Th1 Cytotoxic CD4+ T cells.

Riaz T, Sollid LM, Olsen I, de Souza GA.

Mol Cell Proteomics. 2016 Mar;15(3):1007-16. doi: 10.1074/mcp.M115.050138. Epub 2015 Dec 4.

35.

On the diagnosis and conservation of the poorly known bromeligenous Scinax arduous Peixoto, 2002 (Amphibia; Anura; Hylidae).

Lacerda JV, Ferreira RB, De Souza GA, Da Silva HR, Feio RN.

Zootaxa. 2015 Sep 28;4021(3):401-17. doi: 10.11646/zootaxa.4021.3.1.

PMID:
26624138
36.

Mechanisms underlying AQP4 accumulation in astrocyte endfeet.

Camassa LMA, Lunde LK, Hoddevik EH, Stensland M, Boldt HB, De Souza GA, Ottersen OP, Amiry-Moghaddam M.

Glia. 2015 Nov;63(11):2073-2091. doi: 10.1002/glia.22878. Epub 2015 Jun 29.

PMID:
26119521
37.

Intrathecal BCR transcriptome in multiple sclerosis versus other neuroinflammation: Equally diverse and compartmentalized, but more mutated, biased and overlapping with the proteome.

Johansen JN, Vartdal F, Desmarais C, Tutturen AE, de Souza GA, Lossius A, Holmøy T.

Clin Immunol. 2015 Oct;160(2):211-25. doi: 10.1016/j.clim.2015.06.001. Epub 2015 Jun 6.

PMID:
26055752
38.

Phosphoproteomics analysis of a clinical Mycobacterium tuberculosis Beijing isolate: expanding the mycobacterial phosphoproteome catalog.

Fortuin S, Tomazella GG, Nagaraj N, Sampson SL, Gey van Pittius NC, Soares NC, Wiker HG, de Souza GA, Warren RM.

Front Microbiol. 2015 Feb 10;6:6. doi: 10.3389/fmicb.2015.00006. eCollection 2015.

39.

Different binding motifs of the celiac disease-associated HLA molecules DQ2.5, DQ2.2, and DQ7.5 revealed by relative quantitative proteomics of endogenous peptide repertoires.

Bergseng E, Dørum S, Arntzen MØ, Nielsen M, Nygård S, Buus S, de Souza GA, Sollid LM.

Immunogenetics. 2015 Feb;67(2):73-84. doi: 10.1007/s00251-014-0819-9. Epub 2014 Dec 12.

40.

Identification of rare alternative splicing events in MS/MS data reveals a significant fraction of alternative translation initiation sites.

Kroll JE, de Souza SJ, de Souza GA.

PeerJ. 2014 Nov 13;2:e673. doi: 10.7717/peerj.673. eCollection 2014.

41.

HLA-DQ molecules as affinity matrix for identification of gluten T cell epitopes.

Dørum S, Bodd M, Fallang LE, Bergseng E, Christophersen A, Johannesen MK, Qiao SW, Stamnaes J, de Souza GA, Sollid LM.

J Immunol. 2014 Nov 1;193(9):4497-506. doi: 10.4049/jimmunol.1301466. Epub 2014 Sep 26.

42.

Nasal and ocular amyloidosis in a 15-year-old horse.

Østevik L, Gunnes G, de Souza GA, Wien TN, Sørby R.

Acta Vet Scand. 2014 Aug 27;56:50. doi: 10.1186/s13028-014-0050-6.

43.

Characterization of amyloid in equine recurrent uveitis as AA amyloid.

Ostevik L, de Souza GA, Wien TN, Gunnes G, Sørby R.

J Comp Pathol. 2014 Aug-Oct;151(2-3):228-33. doi: 10.1016/j.jcpa.2014.04.007. Epub 2014 Jun 26.

PMID:
24975895
44.

Assessing the citrullinome in rheumatoid arthritis synovial fluid with and without enrichment of citrullinated peptides.

Tutturen AE, Fleckenstein B, de Souza GA.

J Proteome Res. 2014 Jun 6;13(6):2867-73. doi: 10.1021/pr500030x. Epub 2014 Apr 28.

PMID:
24724574
45.

Concomitant cisplatin plus radiotherapy and high-dose-rate brachytherapy versus radiotherapy alone for stage IIIB epidermoid cervical cancer: a randomized controlled trial.

Zuliani AC, Esteves SC, Teixeira LC, Teixeira JC, de Souza GA, Sarian LO.

J Clin Oncol. 2014 Feb 20;32(6):542-7. doi: 10.1200/JCO.2013.50.1205. Epub 2014 Jan 21.

PMID:
24449243
46.

Mesoamerican origin and pre- and post-columbian expansions of the ranges of Acanthoscelides obtectus say, a cosmopolitan insect pest of the common bean.

Oliveira MR, Corrêa AS, de Souza GA, Guedes RN, de Oliveira LO.

PLoS One. 2013 Jul 31;8(7):e70039. doi: 10.1371/journal.pone.0070039. Print 2013.

47.

Evaluation of germplasm effect on Fe, Zn and Se content in wheat seedlings.

de Souza GA, de Carvalho JG, Rutzke M, Albrecht JC, Guilherme LR, Li L.

Plant Sci. 2013 Sep;210:206-13. doi: 10.1016/j.plantsci.2013.05.015. Epub 2013 Jun 6.

PMID:
23849127
48.

Efficiency of electron transfer initiated chemiluminescence.

Augusto FA, de Souza GA, de Souza Júnior SP, Khalid M, Baader WJ.

Photochem Photobiol. 2013 Nov-Dec;89(6):1299-317. doi: 10.1111/php.12102. Epub 2013 Jul 22. Review.

PMID:
23711099
49.

An approach for triplex-isobaric peptide termini labeling (triplex-IPTL).

Koehler CJ, Arntzen MØ, de Souza GA, Thiede B.

Anal Chem. 2013 Feb 19;85(4):2478-85. doi: 10.1021/ac3035508. Epub 2013 Jan 29.

PMID:
23316706
50.

Prognostic significance of GRP78 expression patterns in breast cancer patients receiving adjuvant chemotherapy.

Baptista MZ, Sarian LO, Vassallo J, Pinto GA, Soares FA, de Souza GA.

Int J Biol Markers. 2011 Jul-Sep;26(3):188-96. doi: 10.5301/JBM.2011.8624. Epub 2011 Sep 7.

PMID:
21928251

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