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Genetic Mapping With Allele Dosage Information in Tetraploid Urochloa decumbens (Stapf) R. D. Webster Reveals Insights Into Spittlebug (Notozulia entreriana Berg) Resistance.

Ferreira RCU, Lara LAC, Chiari L, Barrios SCL, do Valle CB, Valério JR, Torres FZV, Garcia AAF, de Souza AP.

Front Plant Sci. 2019 Feb 21;10:92. doi: 10.3389/fpls.2019.00092. eCollection 2019.


Electrocardiographic parameters of Sapajus libidinosus (SPIX, 1823) after chemical immobilization with tiletamine-zolazepam.

de La Salles AYF, Andrade JK, Lemos KKA, Carreiro ADN, de Souza JG, Costa TSF, Reinaldo MPOS, de Souza AP, de Menezes DJA.

J Med Primatol. 2019 Mar 13. doi: 10.1111/jmp.12403. [Epub ahead of print]


5-Aza-CdR promotes partial MGMT demethylation and modifies expression of different genes in oral squamous cell carcinoma.

do Amaral GCLS, Planello AC, Borgato G, de Lima DG, Guimarães GN, Marques MR, de Souza AP.

Oral Surg Oral Med Oral Pathol Oral Radiol. 2019 Jan 11. pii: S2212-4403(19)30010-0. doi: 10.1016/j.oooo.2019.01.006. [Epub ahead of print]


Short-term responses of soybean roots to individual and combinatorial effects of elevated [CO2] and water deficit.

Bencke-Malato M, De Souza AP, Ribeiro-Alves M, Schmitz JF, Buckeridge MS, Alves-Ferreira M.

Plant Sci. 2019 Mar;280:283-296. doi: 10.1016/j.plantsci.2018.12.021. Epub 2018 Dec 21.


Assessment of acute toxicity and cytotoxicity of fluorescent markers produced by cardanol and glycerol, which are industrial waste, to different biological models.

Pelizaro BI, Braga FC, Crispim BDA, de Barros LGML, Pessatto LR, Oliveira EJT, Vani JM, de Souza AP, Grisolia AB, Antoniolli-Silva ACMB, de Lima DP, Dos Santos Jaques JA, Beatriz A, Oliveira RJ.

Environ Sci Pollut Res Int. 2019 Feb 4. doi: 10.1007/s11356-019-04376-y. [Epub ahead of print]


The control of endopolygalacturonase expression by the sugarcane RAV transcription factor during aerenchyma formation.

Tavares EQP, De Souza AP, Romim GH, Grandis A, Plasencia A, Gaiarsa JW, Grima-Pettenati J, de Setta N, Van Sluys MA, Buckeridge MS.

J Exp Bot. 2019 Jan 7;70(2):497-506. doi: 10.1093/jxb/ery362.


Author Correction: Network of proteins, enzymes and genes linked to biomass degradation shared by Trichoderma species.

Horta MAC, Filho JAF, Murad NF, de Oliveira Santos E, Dos Santos CA, Mendes JS, Brandão MM, Azzoni SF, de Souza AP.

Sci Rep. 2018 Nov 29;8(1):17588. doi: 10.1038/s41598-018-35990-4.


Evaluation of the genotoxic properties of nickel oxide nanoparticles in vitro and in vivo.

De Carli RF, Chaves DDS, Cardozo TR, de Souza AP, Seeber A, Flores WH, Honatel KF, Lehmann M, Dihl RR.

Mutat Res. 2018 Dec;836(Pt B):47-53. doi: 10.1016/j.mrgentox.2018.06.003. Epub 2018 Jun 2.


Classification of auditory selective attention using spatial coherence and modular attention index.

de Souza AP, Soares QB, Felix LB, Mendes EMAM.

Comput Methods Programs Biomed. 2018 Nov;166:107-113. doi: 10.1016/j.cmpb.2018.10.002. Epub 2018 Oct 2.


A proteomics-metabolomics approach indicates changes in hypothalamic glutamate-GABA metabolism of adult female rats submitted to intrauterine growth restriction.

Pedroso AP, Dornellas APS, de Souza AP, Pagotto JF, Oyama LM, Nascimento CMO, Klawitter J, Christians U, Tashima AK, Ribeiro EB.

Eur J Nutr. 2018 Nov 7. doi: 10.1007/s00394-018-1851-6. [Epub ahead of print]


BSD2 is a Rubisco-specific assembly chaperone, forms intermediary hetero-oligomeric complexes, and is nonlimiting to growth in tobacco.

Conlan B, Birch R, Kelso C, Holland S, De Souza AP, Long SP, Beck JL, Whitney SM.

Plant Cell Environ. 2019 Apr;42(4):1287-1301. doi: 10.1111/pce.13473. Epub 2018 Nov 20.


Distinct patterns of CD4 T-cell phenotypes in children with severe therapy-resistant asthma.

de Araújo PD, de Souza APD, Stein RT, Porto BN, Antunes L, Godinho R, Muraro SP, Mattiello R, Sarria EE, Dos Santos G, Pinto LA, Jones MH, Bonorino C, Pitrez PMC.

Pediatr Allergy Immunol. 2019 Feb;30(1):130-136. doi: 10.1111/pai.12993. Epub 2018 Dec 28. No abstract available.


QTL detection for growth and latex production in a full-sib rubber tree population cultivated under suboptimal climate conditions.

Rosa JRBF, Mantello CC, Garcia D, de Souza LM, da Silva CC, Gazaffi R, da Silva CC, Toledo-Silva G, Cubry P, Garcia AAF, de Souza AP, Le Guen V.

BMC Plant Biol. 2018 Oct 10;18(1):223. doi: 10.1186/s12870-018-1450-y.


Extremophiles as a Model of a Natural Ecosystem: Transcriptional Coordination of Genes Reveals Distinct Selective Responses of Plants Under Climate Change Scenarios.

Bajay SK, Cruz MV, da Silva CC, Murad NF, Brandão MM, de Souza AP.

Front Plant Sci. 2018 Sep 19;9:1376. doi: 10.3389/fpls.2018.01376. eCollection 2018.


Comparison between electroporation and polyfection in pig sperm: efficiency and cell viability implications.

da Silva Z, de Souza AP, Pandolfi JRC, da Fonseca FN, da Veiga Lima-Rosa CA, Marques MG.

Zygote. 2018 Aug;26(4):286-293. doi: 10.1017/S0967199418000205. Epub 2018 Sep 13.


Assessment of complex genomic alterations induced by AZT, 3TC, and the combination AZT +3TC.

Grando AC, Guimarães NN, de Souza AP, Lehmann M, Cunha KS, Dihl RR.

Drug Chem Toxicol. 2018 Sep 12:1-6. doi: 10.1080/01480545.2018.1504959. [Epub ahead of print]


High-Resolution Genetic Map and QTL Analysis of Growth-Related Traits of Hevea brasiliensis Cultivated Under Suboptimal Temperature and Humidity Conditions.

Conson ARO, Taniguti CH, Amadeu RR, Andreotti IAA, de Souza LM, Dos Santos LHB, Rosa JRBF, Mantello CC, da Silva CC, José Scaloppi Junior E, Ribeiro RV, Le Guen V, Garcia AAF, Gonçalves PS, de Souza AP.

Front Plant Sci. 2018 Aug 24;9:1255. doi: 10.3389/fpls.2018.01255. eCollection 2018.


Genetic structure of two Prosopis species in Chaco areas: A lack of allelic diversity diagnosis and insights into the allelic conservation of the affected species.

Alves FM, Sartori ÂLB, Zucchi MI, Azevedo-Tozzi AMG, Tambarussi EV, Alves-Pereira A, de Souza AP.

Ecol Evol. 2018 Jun 7;8(13):6558-6574. doi: 10.1002/ece3.4137. eCollection 2018 Jul.


Toward improving photosynthesis in cassava: Characterizing photosynthetic limitations in four current African cultivars.

De Souza AP, Long SP.

Food Energy Secur. 2018 May;7(2):e00130. doi: 10.1002/fes3.130. Epub 2018 Apr 16.


Linkage Disequilibrium and Population Structure in Wild and Cultivated Populations of Rubber Tree (Hevea brasiliensis).

de Souza LM, Dos Santos LHB, Rosa JRBF, da Silva CC, Mantello CC, Conson ARO, Scaloppi EJ Jr, Fialho JF, de Moraes MLT, Gonçalves PS, Margarido GRA, Garcia AAF, Le Guen V, de Souza AP.

Front Plant Sci. 2018 Jul 3;9:815. doi: 10.3389/fpls.2018.00815. eCollection 2018.


Vaccination with RSV M209-223 peptide promotes a protective immune response associated with reduced pulmonary inflammation.

Fazolo T, Gassen RB, de Freitas DN, Borges TJ, Rigo MM, da Silva RD, Maito F, Cunha A, Gasparin Bueno Mendes DA, Báfica A, Vargas JE, de Souza APD, Bonorino C.

Antiviral Res. 2018 Sep;157:102-110. doi: 10.1016/j.antiviral.2018.07.007. Epub 2018 Jul 7.


Chronic Metabolic Derangement-Induced Cognitive Deficits and Neurotoxicity Are Associated with REST Inactivation.

Remor AP, da Silva RA, de Matos FJ, Glaser V, de Paula Martins R, Ghisoni K, da Luz Scheffer D, Andia DC, Portinho D, de Souza AP, de Oliveira PA, Prediger RD, Torres AI, Linhares RMM, Walz R, Ronsoni MF, Hohl A, Rafacho A, Aguiar AS Jr, De Paul AL, Latini A.

Mol Neurobiol. 2019 Mar;56(3):1539-1557. doi: 10.1007/s12035-018-1175-9. Epub 2018 Jun 14.


Population genetic structure, introgression, and hybridization in the genus Rhizophora along the Brazilian coast.

Francisco PM, Mori GM, Alves FM, Tambarussi EV, de Souza AP.

Ecol Evol. 2018 Feb 25;8(6):3491-3504. doi: 10.1002/ece3.3900. eCollection 2018 Mar.


Zirconium catalyzed synthesis of 2-arylidene Indan-1,3-diones and evaluation of their inhibitory activity against NS2B-NS3 WNV protease.

Oliveira AFCDS, de Souza APM, de Oliveira AS, da Silva ML, de Oliveira FM, Santos EG, da Silva ÍEP, Ferreira RS, Villela FS, Martins FT, Leal DHS, Vaz BG, Teixeira RR, de Paula SO.

Eur J Med Chem. 2018 Apr 10;149:98-109. doi: 10.1016/j.ejmech.2018.02.037. Epub 2018 Feb 22.


Network of proteins, enzymes and genes linked to biomass degradation shared by Trichoderma species.

Horta MAC, Filho JAF, Murad NF, de Oliveira Santos E, Dos Santos CA, Mendes JS, Brandão MM, Azzoni SF, de Souza AP.

Sci Rep. 2018 Jan 22;8(1):1341. doi: 10.1038/s41598-018-19671-w. Erratum in: Sci Rep. 2018 Nov 29;8(1):17588.


Roles of auxin and ethylene in aerenchyma formation in sugarcane roots.

Tavares EQP, Grandis A, Lembke CG, Souza GM, Purgatto E, De Souza AP, Buckeridge MS.

Plant Signal Behav. 2018 Mar 4;13(3):e1422464. doi: 10.1080/15592324.2017.1422464. Epub 2018 Mar 14.


Occurrence of glyphosate and AMPA residues in soy-based infant formula sold in Brazil.

Rodrigues NR, de Souza APF.

Food Addit Contam Part A Chem Anal Control Expo Risk Assess. 2018 Apr;35(4):723-730. doi: 10.1080/19440049.2017.1419286. Epub 2018 Feb 20.


Occurrence and risk assessment of population exposed to deoxynivalenol in foods derived from wheat flour in Brazil.

Silva MV, Pante GC, Romoli JCZ, de Souza APM, Rocha GHOD, Ferreira FD, Feijó ALR, Moscardi SMP, de Paula KR, Bando E, Nerilo SB, Machinski M Jr.

Food Addit Contam Part A Chem Anal Control Expo Risk Assess. 2018 Mar;35(3):546-554. doi: 10.1080/19440049.2017.1411613. Epub 2017 Dec 28.


Chromosomal instability and cytotoxicity induced by ribavirin: comparative analysis in cell lines with different drug-metabolizing profiles.

Librelotto CS, Simon D, de Souza AP, Álvares-da-Silva MR, Dihl RR.

Drug Chem Toxicol. 2017 Dec 4:1-6. doi: 10.1080/01480545.2017.1405970. [Epub ahead of print]


Cell wall changes during the formation of aerenchyma in sugarcane roots.

Leite DCC, Grandis A, Tavares EQP, Piovezani AR, Pattathil S, Avci U, Rossini A, Cambler A, De Souza AP, Hahn MG, Buckeridge MS.

Ann Bot. 2017 Nov 10;120(5):693-708. doi: 10.1093/aob/mcx050.


Carbohydrate-active enzymes in Trichoderma harzianum: a bioinformatic analysis bioprospecting for key enzymes for the biofuels industry.

Ferreira Filho JA, Horta MAC, Beloti LL, Dos Santos CA, de Souza AP.

BMC Genomics. 2017 Oct 12;18(1):779. doi: 10.1186/s12864-017-4181-9.


Carbohydrate-mediated responses during zygotic and early somatic embryogenesis in the endangered conifer, Araucaria angustifolia.

Navarro BV, Elbl P, De Souza AP, Jardim V, de Oliveira LF, Macedo AF, Dos Santos ALW, Buckeridge MS, Floh EIS.

PLoS One. 2017 Jul 5;12(7):e0180051. doi: 10.1371/journal.pone.0180051. eCollection 2017.


Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.

Machado ATP, Fonseca EMB, Reis MAD, Saraiva AM, Santos CAD, de Toledo MAS, Polikarpov I, de Souza AP, Aparicio R, Iulek J.

Proteins. 2017 Oct;85(10):1931-1943. doi: 10.1002/prot.25347. Epub 2017 Jul 24.


The Role of Sink Strength and Nitrogen Availability in the Down-Regulation of Photosynthetic Capacity in Field-Grown Nicotiana tabacum L. at Elevated CO2 Concentration.

Ruiz-Vera UM, De Souza AP, Long SP, Ort DR.

Front Plant Sci. 2017 Jun 9;8:998. doi: 10.3389/fpls.2017.00998. eCollection 2017.


Functional metagenomics of oil-impacted mangrove sediments reveals high abundance of hydrolases of biotechnological interest.

Ottoni JR, Cabral L, de Sousa STP, Júnior GVL, Domingos DF, Soares Junior FL, da Silva MCP, Marcon J, Dias ACF, de Melo IS, de Souza AP, Andreote FD, de Oliveira VM.

World J Microbiol Biotechnol. 2017 Jul;33(7):141. doi: 10.1007/s11274-017-2307-5. Epub 2017 Jun 7.


Three novel Pseudomonas phages isolated from composting provide insights into the evolution and diversity of tailed phages.

Amgarten D, Martins LF, Lombardi KC, Antunes LP, de Souza APS, Nicastro GG, Kitajima EW, Quaggio RB, Upton C, Setubal JC, da Silva AM.

BMC Genomics. 2017 May 4;18(1):346. doi: 10.1186/s12864-017-3729-z.


Crystal structure of a small heat-shock protein from Xylella fastidiosa reveals a distinct high-order structure.

Fonseca EM, Scorsato V, Dos Santos ML, Júnior AT, Tada SF, Dos Santos CA, de Toledo MA, de Souza AP, Polikarpov I, Aparicio R.

Acta Crystallogr F Struct Biol Commun. 2017 Apr 1;73(Pt 4):222-227. doi: 10.1107/S2053230X17004101. Epub 2017 Mar 22.


Immune response of toddlers with history of prematurity.

Muraro SP, Pitrez PM, de Souza APD, Porto BN, Vargas JE, Ewald IP, Heinzmann-Filho JP, Dos Santos G, Baptista TS, Gandolfi TD, Machado FD, Jones MH, Bonorino C, Stein RT.

Allergol Immunopathol (Madr). 2017 Sep - Oct;45(5):425-431. doi: 10.1016/j.aller.2016.10.020. Epub 2017 Feb 21.


In vitro Determination of Extracellular Proteins from Xylella fastidiosa.

Mendes JS, Santiago AS, Toledo MA, Horta MA, de Souza AA, Tasic L, de Souza AP.

Front Microbiol. 2016 Dec 26;7:2090. doi: 10.3389/fmicb.2016.02090. eCollection 2016.


Analysis of Three Sugarcane Homo/Homeologous Regions Suggests Independent Polyploidization Events of Saccharum officinarum and Saccharum spontaneum.

Vilela MM, Del Bem LE, Van Sluys MA, de Setta N, Kitajima JP, Cruz GM, Sforça DA, de Souza AP, Ferreira PC, Grativol C, Cardoso-Silva CB, Vicentini R, Vincentz M.

Genome Biol Evol. 2017 Feb 1;9(2):266-278. doi: 10.1093/gbe/evw293.


GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane.

Balsalobre TW, da Silva Pereira G, Margarido GR, Gazaffi R, Barreto FZ, Anoni CO, Cardoso-Silva CB, Costa EA, Mancini MC, Hoffmann HP, de Souza AP, Garcia AA, Carneiro MS.

BMC Genomics. 2017 Jan 11;18(1):72. doi: 10.1186/s12864-016-3383-x.


Population genetic analysis of Giardia duodenalis: genetic diversity and haplotype sharing between clinical and environmental sources.

Durigan M, Ciampi-Guillardi M, Rodrigues RC, Greinert-Goulart JA, Siqueira-Castro IC, Leal DA, Yamashiro S, Bonatti TR, Zucchi MI, Franco RM, de Souza AP.

Microbiologyopen. 2017 Apr;6(2). doi: 10.1002/mbo3.424. Epub 2017 Jan 11.


The Antitoxin Protein of a Toxin-Antitoxin System from Xylella fastidiosa Is Secreted via Outer Membrane Vesicles.

Santiago AD, Mendes JS, Dos Santos CA, de Toledo MA, Beloti LL, Crucello A, Horta MA, Favaro MT, Munar DM, de Souza AA, Cotta MA, de Souza AP.

Front Microbiol. 2016 Dec 20;7:2030. doi: 10.3389/fmicb.2016.02030. eCollection 2016.


Xyloglucan breakdown by endo-xyloglucanase family 74 from Aspergillus fumigatus.

Damasio AR, Rubio MV, Gonçalves TA, Persinoti GF, Segato F, Prade RA, Contesini FJ, de Souza AP, Buckeridge MS, Squina FM.

Appl Microbiol Biotechnol. 2017 Apr;101(7):2893-2903. doi: 10.1007/s00253-016-8014-6. Epub 2016 Dec 24.


IL-8/IL-17 gene variations and the susceptibility to severe viral bronchiolitis.

Pinto LA, DE Azeredo Leitão LA, Mocellin M, Acosta P, Caballero MT, Libster R, Vargas JE, Polack F, Comaru T, Stein RT, DE Souza AP.

Epidemiol Infect. 2017 Mar;145(4):642-646. doi: 10.1017/S0950268816002648. Epub 2016 Nov 28.


Comparative study on the induction of complex genomic alterations after exposure of mammalian cells to carboplatin and oxaliplatin.

de Souza AP, Lehmann M, Dihl RR.

Drug Chem Toxicol. 2017 Oct;40(4):410-415. doi: 10.1080/01480545.2016.1252918. Epub 2016 Nov 20.


Rooting for cassava: insights into photosynthesis and associated physiology as a route to improve yield potential.

De Souza AP, Massenburg LN, Jaiswal D, Cheng S, Shekar R, Long SP.

New Phytol. 2017 Jan;213(1):50-65. doi: 10.1111/nph.14250. Epub 2016 Oct 25. Review.


Isolation and characterization of microsatellite loci in Sisyrinchium (Iridaceae) and cross amplification in other genera.

Miz RB, Tacuatiá LO, Cidade FW, de Souza AP, Bered F, Eggers L, de Souza-Chies TT.

Genet Mol Res. 2016 Sep 16;15(3). doi: 10.4238/gmr.15038474.


Humoral and cellular immune responses in mice against secreted and somatic antigens from a Corynebacterium pseudotuberculosis attenuated strain: Immune response against a C. pseudotuberculosis strain.

Vale VL, Silva Mda C, de Souza AP, Trindade SC, de Moura-Costa LF, Dos Santos-Lima EK, Nascimento IL, Cardoso HS, Marques Ede J, Paule BJ, Nascimento RJ.

BMC Vet Res. 2016 Sep 8;12(1):195. doi: 10.1186/s12917-016-0811-8.

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