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Complete Genome Sequences of 28 Lactococcal Bacteriophages Isolated from Failed Dairy Fermentation Processes.

Marcelli B, de Jong A, Janzen T, Serrano M, Kok J, Kuipers OP.

Microbiol Resour Announc. 2020 Mar 19;9(12). pii: e01535-19. doi: 10.1128/MRA.01535-19.


68Ga-PSMA guided bone biopsies for molecular diagnostics in metastatic prostate cancer patients.

de Jong AC, Smits M, van Riet J, Fütterer JJ, Brabander T, Hamberg P, van Oort IM, de Wit R, Lolkema MP, Mehra N, Segbers M, van der Veldt AAM.

J Nucl Med. 2020 Mar 13. pii: jnumed.119.241109. doi: 10.2967/jnumed.119.241109. [Epub ahead of print]


Complex Geometric Structure of a Simple Solid-Liquid Interface: GaN(0001)-Ga.

de Jong AEF, Vonk V, Boćkowski M, Grzegory I, Honkimäki V, Vlieg E.

Phys Rev Lett. 2020 Feb 28;124(8):086101. doi: 10.1103/PhysRevLett.124.086101.


Rasch Analysis of the Burn-Specific Pain Anxiety Scale: Evidence for the Abbreviated Version.

de Jong AEE, Tuinebreijer W, Hofland HWC, Van Loey NEE.

J Appl Meas. 2020;21(1):38-49.


Multiplexed Continuous Biosensing by Single-Molecule Encoded Nanoswitches.

Lubken RM, de Jong AM, Prins MWJ.

Nano Lett. 2020 Mar 12. doi: 10.1021/acs.nanolett.9b04561. [Epub ahead of print]


How can I manage anaesthesia in obese patients?

De Jong A, Rollé A, Souche FR, Yengui O, Verzilli D, Chanques G, Nocca D, Futier E, Jaber S.

Anaesth Crit Care Pain Med. 2020 Feb 14. pii: S2352-5568(20)30022-9. doi: 10.1016/j.accpm.2019.12.009. [Epub ahead of print] Review.


Oral and Gut Microbial Diversity and Immune Regulation in Patients with HIV on Antiretroviral Therapy.

Annavajhala MK, Khan SD, Sullivan SB, Shah J, Pass L, Kister K, Kunen H, Chiang V, Monnot GC, Ricupero CL, Mazur RA, Gordon P, de Jong A, Wadhwa S, Yin MT, Demmer RT, Uhlemann AC.

mSphere. 2020 Feb 5;5(1). pii: e00798-19. doi: 10.1128/mSphere.00798-19.


Canadian Stroke Best Practice Recommendations: Rehabilitation, Recovery, and Community Participation following Stroke. Part Two: Transitions and Community Participation Following Stroke.

Mountain A, Patrice Lindsay M, Teasell R, Salbach NM, de Jong A, Foley N, Bhogal S, Bains N, Bowes R, Cheung D, Corriveau H, Joseph L, Lesko D, Millar A, Parappilly B, Pikula A, Scarfone D, Rochette A, Taylor T, Vallentin T, Dowlatshahi D, Gubitz G, Casaubon LK, Cameron JI.

Int J Stroke. 2020 Jan 27:1747493019897847. doi: 10.1177/1747493019897847. [Epub ahead of print]


Effect of Hydroxyethyl Starch vs Saline for Volume Replacement Therapy on Death or Postoperative Complications Among High-Risk Patients Undergoing Major Abdominal Surgery: The FLASH Randomized Clinical Trial.

Futier E, Garot M, Godet T, Biais M, Verzilli D, Ouattara A, Huet O, Lescot T, Lebuffe G, Dewitte A, Cadic A, Restoux A, Asehnoune K, Paugam-Burtz C, Cuvillon P, Faucher M, Vaisse C, El Amine Y, Beloeil H, Leone M, Noll E, Piriou V, Lasocki S, Bazin JE, Pereira B, Jaber S; FLASH Trial Group, Lasocki S, Huet O, Cadic A, Jacob C, Paugam-Burtz C, Restoux A, Ouattara A, Feitita I, Deloge E, Defaye M, Joannes-Boyau O, Carles P, Napolitano G, Monziols S, Futier E, Vignaud M, Paul S, Gahbiche K, Fayon J, Laroche E, Bazin JE, Brandely A, Le Moal C, Lebuffe G, Garot M, Piriou V, Jaber S, Chanques G, Verzilli D, De Jong A, Millot A, Castagnoli A, Leone M, Pastene B, Castelli C, Medam S, Velly L, Vaisse C, Faucher M, Asehnoune K, Samba E, Roquilly A, Le Penndu M, Cuvillon P, Yves Lefrant J, Wira O, Dubout E, Mfam WS, Lescot T, Begneu E, Burey J, Cirilovic T, Beloeil H, Allo G, Pottecher J, Lebas B, Venot C, Rameau JP, Dimache F, Léger PS, El Amine Y.

JAMA. 2020 Jan 21;323(3):225-236. doi: 10.1001/jama.2019.20833.


Genome Sequences of Chikungunya Virus Strains from Bangladesh and Thailand.

Pyke AT, McMahon J, Burtonclay P, Nair N, De Jong A.

Microbiol Resour Announc. 2020 Jan 9;9(2). pii: e01452-19. doi: 10.1128/MRA.01452-19.


Human T cell response to CD1a and contact dermatitis allergens in botanical extracts and commercial skin care products.

Nicolai S, Wegrecki M, Cheng TY, Bourgeois EA, Cotton RN, Mayfield JA, Monnot GC, Le Nours J, Van Rhijn I, Rossjohn J, Moody DB, de Jong A.

Sci Immunol. 2020 Jan 3;5(43). pii: eaax5430. doi: 10.1126/sciimmunol.aax5430. Epub 2020 Jan 3.


Trials on oxygen supplementation in sepsis: better late than never.

Perner A, De Jong A, Shankar-Hari M.

Intensive Care Med. 2020 Jan;46(1):116-118. doi: 10.1007/s00134-019-05874-w. Epub 2019 Nov 26. No abstract available.


The High-Quality Complete Genome Sequence of the Opportunistic Fungal Pathogen Candida vulturna CBS 14366T.

Navarro-Muñoz JC, de Jong AW, Gerrits van den Ende B, Haas PJ, Then ER, Mohd Tap R, Collemare J, Hagen F.

Mycopathologia. 2019 Dec;184(6):731-734. doi: 10.1007/s11046-019-00404-0. Epub 2019 Nov 16.


Construction and characterization of a double mutant of Enterococcus faecalis that does not produce biogenic amines.

Perez M, Calles-Enríquez M, Del Rio B, Redruello B, de Jong A, Kuipers OP, Kok J, Martin MC, Ladero V, Fernandez M, Alvarez MA.

Sci Rep. 2019 Nov 14;9(1):16881. doi: 10.1038/s41598-019-53175-5.


Effect of lung recruitment maneuver on oxygenation, physiological parameters and mortality in acute respiratory distress syndrome patients: a systematic review and meta-analysis.

Pensier J, de Jong A, Hajjej Z, Molinari N, Carr J, Belafia F, Chanques G, Futier E, Azoulay E, Jaber S.

Intensive Care Med. 2019 Dec;45(12):1691-1702. doi: 10.1007/s00134-019-05821-9. Epub 2019 Nov 7.


Correction to: Focus on ventilation and ARDS: recent insights.

De Jong A, Jaber S, Ferguson ND.

Intensive Care Med. 2020 Jan;46(1):152. doi: 10.1007/s00134-019-05843-3.


New antimicrobial susceptibility data from monitoring of Mycoplasma bovis isolated in Europe.

Klein U, de Jong A, Youala M, El Garch F, Stevenin C, Moyaert H, Rose M, Catania S, Gyuranecz M, Pridmore A, Ayling RD.

Vet Microbiol. 2019 Nov;238:108432. doi: 10.1016/j.vetmic.2019.108432. Epub 2019 Sep 27.


Author Correction: Illumina sequencing of clinical samples for virus detection in a public health laboratory.

Huang B, Jennison A, Whiley D, McMahon J, Hewitson G, Graham R, De Jong A, Warrilow D.

Sci Rep. 2019 Oct 18;9(1):15195. doi: 10.1038/s41598-019-50827-4.


Focus on ventilation and ARDS: recent insights.

De Jong A, Jaber S, Ferguson ND.

Intensive Care Med. 2019 Nov;45(11):1635-1638. doi: 10.1007/s00134-019-05804-w. Epub 2019 Oct 16. No abstract available. Erratum in: Intensive Care Med. 2019 Oct 30;:.


Erratum: Survey of antimicrobial susceptibility of bacterial pathogens isolated from dogs and cats with respiratory tract infections in Europe: ComPath results.

Moyaert H, de Jong A, Simjee S, Rose M, Youala M, El Garch F, Vila T, Klein U, Rzewuska M, Morrissey I.

J Appl Microbiol. 2019 Nov;127(5):1594. doi: 10.1111/jam.14420. No abstract available.


Invasive pulmonary aspergillosis in critically ill patients with hematological malignancies.

Pardo E, Lemiale V, Mokart D, Stoclin A, Moreau AS, Kerhuel L, Calvet L, Valade S, De Jong A, Darmon M, Azoulay E.

Intensive Care Med. 2019 Dec;45(12):1732-1741. doi: 10.1007/s00134-019-05789-6. Epub 2019 Oct 10.


What is the most appropriate spontaneous breathing trial before extubation in ICU ventilated patients?

De Jong A, Capdevila M, Chanques G, Cazenave L, Jaber S.

Anaesth Crit Care Pain Med. 2019 Oct;38(5):429-430. doi: 10.1016/j.accpm.2019.09.005. No abstract available.


[Preoperative risk and perioperative management of obese patients].

De Jong A, Verzilli D, Chanques G, Futier E, Jaber S.

Rev Mal Respir. 2019 Oct;36(8):985-1001. doi: 10.1016/j.rmr.2019.01.009. Epub 2019 Sep 11. Review. French.


ADAM17-Mediated Reduction in CD14++CD16+ Monocytes ex vivo and Reduction in Intermediate Monocytes With Immune Paresis in Acute Pancreatitis and Acute Alcoholic Hepatitis.

Waller K, James C, de Jong A, Blackmore L, Ma Y, Stagg A, Kelsell D, O'Dwyer M, Hutchins R, Alazawi W.

Front Immunol. 2019 Aug 27;10:1902. doi: 10.3389/fimmu.2019.01902. eCollection 2019.


'I treat it but I don't know what this disease is': a qualitative study on noma (cancrum oris) and traditional healing in northwest Nigeria.

Farley E, Bala HM, Lenglet A, Mehta U, Abubakar N, Samuel J, de Jong A, Bil K, Oluyide B, Fotso A, Stringer B, Cuesta JG, Venables E.

Int Health. 2020 Jan 1;12(1):28-35. doi: 10.1093/inthealth/ihz066.


From the ICU to the operating room: how to manage the patient?

Tankel J, Zimmerman F, De Jong A, Martin-Loeches I, Einav S.

Curr Opin Anaesthesiol. 2020 Apr;33(2):139-145. doi: 10.1097/ACO.0000000000000785. Review.


Highly prolific authors in critical care: which factors influence their scientific output?

Weiss E, Hjortrup PB, Robba C, De Jong A, Helms J.

Intensive Care Med. 2019 Nov;45(11):1673-1675. doi: 10.1007/s00134-019-05744-5. Epub 2019 Aug 22. No abstract available.


Who are these highly prolific authors in critical care?

Robba C, Weiss E, Hjortrup PB, De Jong A, Helms J.

Intensive Care Med. 2019 Nov;45(11):1670-1672. doi: 10.1007/s00134-019-05743-6. Epub 2019 Aug 21. No abstract available.


Are critical care authors publication dealers?

Hjortrup PB, Robba C, Weiss E, De Jong A, Helms J.

Intensive Care Med. 2019 Nov;45(11):1667-1669. doi: 10.1007/s00134-019-05733-8. Epub 2019 Aug 16. No abstract available.


A Specific Sugar Moiety in the Lactococcus lactis Cell Wall Pellicle Is Required for Infection by CHPC971, a Member of the Rare 1706 Phage Species.

Marcelli B, de Jong A, Karsens H, Janzen T, Kok J, Kuipers OP.

Appl Environ Microbiol. 2019 Sep 17;85(19). pii: e01224-19. doi: 10.1128/AEM.01224-19. Print 2019 Oct 1.


Less Is Better. Avoiding Redundant Measurements in Studies on Wild Birds in Accordance to the Principles of the 3Rs.

de Jong A.

Front Vet Sci. 2019 Jun 19;6:195. doi: 10.3389/fvets.2019.00195. eCollection 2019.


The differential effect of clarithromycin and azithromycin on induction of macrolide resistance in Mycobacterium abscessus.

Schildkraut JA, Pennings LJ, Ruth MM, de Brouwer AP, Wertheim HF, Hoefsloot W, de Jong A, van Ingen J.

Future Microbiol. 2019 Jun;14:749-755. doi: 10.2217/fmb-2018-0310. Epub 2019 Jul 4.


Variability of von Willebrand factor-related parameters in endothelial colony forming cells.

de Jong A, Weijers E, Dirven R, de Boer S, Streur J, Eikenboom J.

J Thromb Haemost. 2019 Sep;17(9):1544-1554. doi: 10.1111/jth.14558. Epub 2019 Jul 22.


Adaptive Mutations in Replicase Transmembrane Subunits Can Counteract Inhibition of Equine Arteritis Virus RNA Synthesis by Cyclophilin Inhibitors.

de Wilde AH, Boomaars-van der Zanden AL, de Jong AWM, Bárcena M, Snijder EJ, Posthuma CC.

J Virol. 2019 Aug 28;93(18). pii: e00490-19. doi: 10.1128/JVI.00490-19. Print 2019 Sep 15.


Parents' memories and appraisals after paediatric burn injury: a qualitative study.

Egberts MR, Engelhard IM, de Jong AEE, Hofland HWC, Geenen R, Van Loey NEE.

Eur J Psychotraumatol. 2019 Jun 3;10(1):1615346. doi: 10.1080/20008198.2019.1615346. eCollection 2019.


Canadian Stroke Best Practice Recommendations: Mood, Cognition and Fatigue following Stroke, 6th edition update 2019.

Lanctôt KL, Lindsay MP, Smith EE, Sahlas DJ, Foley N, Gubitz G, Austin M, Ball K, Bhogal S, Blake T, Herrmann N, Hogan D, Khan A, Longman S, King A, Leonard C, Shoniker T, Taylor T, Teed M, de Jong A, Mountain A, Casaubon LK, Dowlatshahi D, Swartz RH; Management of Mood, Cognition and Fatigue Following Stroke Best Practice Writing Group, the Heart & Stroke Canadian Stroke Best Practices and Quality Advisory Committee; in collaboration with the Canadian Stroke Consortium.

Int J Stroke. 2019 Jun 21:1747493019847334. doi: 10.1177/1747493019847334. [Epub ahead of print]


The protein regulator ArgR and the sRNA derived from the 3'-UTR region of its gene, ArgX, both regulate the arginine deiminase pathway in Lactococcus lactis.

van der Meulen SB, Hesseling-Meinders A, de Jong A, Kok J.

PLoS One. 2019 Jun 20;14(6):e0218508. doi: 10.1371/journal.pone.0218508. eCollection 2019.


Attack, Defend and Persist: How the Fungal Pathogen Candida auris was Able to Emerge Globally in Healthcare Environments.

de Jong AW, Hagen F.

Mycopathologia. 2019 Jun;184(3):353-365. doi: 10.1007/s11046-019-00351-w. Epub 2019 Jun 17. Review.


Videolaryngoscopy in critically ill patients.

Jaber S, De Jong A, Pelosi P, Cabrini L, Reignier J, Lascarrou JB.

Crit Care. 2019 Jun 17;23(1):221. doi: 10.1186/s13054-019-2487-5.


Origins of Enterovirus Replication Organelles Established by Whole-Cell Electron Microscopy.

Melia CE, Peddie CJ, de Jong AWM, Snijder EJ, Collinson LM, Koster AJ, van der Schaar HM, van Kuppeveld FJM, Bárcena M.

mBio. 2019 Jun 11;10(3). pii: e00951-19. doi: 10.1128/mBio.00951-19.


SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse.

Koopmans F, van Nierop P, Andres-Alonso M, Byrnes A, Cijsouw T, Coba MP, Cornelisse LN, Farrell RJ, Goldschmidt HL, Howrigan DP, Hussain NK, Imig C, de Jong APH, Jung H, Kohansalnodehi M, Kramarz B, Lipstein N, Lovering RC, MacGillavry H, Mariano V, Mi H, Ninov M, Osumi-Sutherland D, Pielot R, Smalla KH, Tang H, Tashman K, Toonen RFG, Verpelli C, Reig-Viader R, Watanabe K, van Weering J, Achsel T, Ashrafi G, Asi N, Brown TC, De Camilli P, Feuermann M, Foulger RE, Gaudet P, Joglekar A, Kanellopoulos A, Malenka R, Nicoll RA, Pulido C, de Juan-Sanz J, Sheng M, Südhof TC, Tilgner HU, Bagni C, Bayés À, Biederer T, Brose N, Chua JJE, Dieterich DC, Gundelfinger ED, Hoogenraad C, Huganir RL, Jahn R, Kaeser PS, Kim E, Kreutz MR, McPherson PS, Neale BM, O'Connor V, Posthuma D, Ryan TA, Sala C, Feng G, Hyman SE, Thomas PD, Smit AB, Verhage M.

Neuron. 2019 Jul 17;103(2):217-234.e4. doi: 10.1016/j.neuron.2019.05.002. Epub 2019 Jun 3.


Species-Specific Colocalization of Middle East Respiratory Syndrome Coronavirus Attachment and Entry Receptors.

Widagdo W, Okba NMA, Li W, de Jong A, de Swart RL, Begeman L, van den Brand JMA, Bosch BJ, Haagmans BL.

J Virol. 2019 Jul 30;93(16). pii: e00107-19. doi: 10.1128/JVI.00107-19. Print 2019 Aug 15.


Candidemia in critically ill immunocompromised patients: report of a retrospective multicenter cohort study.

Ghrenassia E, Mokart D, Mayaux J, Demoule A, Rezine I, Kerhuel L, Calvet L, De Jong A, Azoulay E, Darmon M.

Ann Intensive Care. 2019 Jun 3;9(1):62. doi: 10.1186/s13613-019-0539-2.


Exoproteome Heterogeneity among Closely Related Staphylococcus aureus t437 Isolates and Possible Implications for Virulence.

Zhao X, Palma Medina LM, Stobernack T, Glasner C, de Jong A, Utari P, Setroikromo R, Quax WJ, Otto A, Becher D, Buist G, van Dijl JM.

J Proteome Res. 2019 Jul 5;18(7):2859-2874. doi: 10.1021/acs.jproteome.9b00179. Epub 2019 Jun 5.


Reconstruction and inference of the Lactococcus lactis MG1363 gene co-expression network.

Omony J, de Jong A, Kok J, van Hijum SAFT.

PLoS One. 2019 May 22;14(5):e0214868. doi: 10.1371/journal.pone.0214868. eCollection 2019.


SUPERNOVA: will its energy trigger the formation of a new therapeutic star?

Bein T, De Jong A, Perner A.

Intensive Care Med. 2019 Jul;45(7):1032-1034. doi: 10.1007/s00134-019-05641-x. Epub 2019 May 20. No abstract available.


Factors promoting Iranian older adults' spirituality: a qualitative content analysis.

Hajinejad F, Ebrahimi E, de Jong A, Ravanipour M.

BMC Geriatr. 2019 May 9;19(1):132. doi: 10.1186/s12877-019-1146-7.


Use of "C9/11 Mismatch" Control siRNA Reveals Sequence-Related Off-Target Effect on Coagulation of an siRNA Targeting Mouse Coagulation Factor XII.

Heestermans M, de Jong A, van Tilburg S, Reitsma PH, Versteeg HH, Spronk HM, van Vlijmen BJM.

Nucleic Acid Ther. 2019 Aug;29(4):218-223. doi: 10.1089/nat.2018.0767. Epub 2019 May 7.


Failure with acquired resistance of an optimised bedaquiline-based treatment regimen for pulmonary Mycobacterium avium complex disease.

Zweijpfenning SMH, Schildkraut JA, Coolen JPM, Ruesen C, Koenraad E, Janssen A, Ruth MM, de Jong AS, Kuipers S, Aarnoutse RE, Magis-Escurra C, Hoefsloot W, van Ingen J.

Eur Respir J. 2019 Jul 11;54(1). pii: 1900118. doi: 10.1183/13993003.00118-2019. Print 2019 Jul. No abstract available.


Medical school ranking and dermatology match results: an analysis of the 2018 match data.

Ryan MP, De Jong AL, Wagner RF.

Dermatol Online J. 2019 Mar 15;25(3). pii: 13030/qt59p3z80r.

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