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Items: 1 to 50 of 119

1.

Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water.

Holman LE, de Bruyn M, Creer S, Carvalho G, Robidart J, Rius M.

Sci Rep. 2019 Aug 9;9(1):11559. doi: 10.1038/s41598-019-47899-7.

2.

Providence virus: An animal virus that replicates in plants or a plant virus that infects and replicates in animal cells?

Jiwaji M, Matcher GF, de Bruyn MM, Awando JA, Moodley H, Waterworth D, Jarvie RA, Dorrington RA.

PLoS One. 2019 Jun 4;14(6):e0217494. doi: 10.1371/journal.pone.0217494. eCollection 2019.

3.

MAPK pathway activity plays a key role in PD-L1 expression of lung adenocarcinoma cells.

Stutvoet TS, Kol A, de Vries EG, de Bruyn M, Fehrmann RS, Terwisscha van Scheltinga AG, de Jong S.

J Pathol. 2019 Sep;249(1):52-64. doi: 10.1002/path.5280. Epub 2019 May 21.

4.

Dehydration of Alginic Acid Cryogel by TiCl4 vapor: Direct Access to Mesoporous TiO2 @C Nanocomposites and Their Performance in Lithium-Ion Batteries.

Kim S, De Bruyn M, Alauzun JG, Louvain N, Brun N, Macquarrie DJ, Stievano L, Mutin PH, Monconduit L, Boury B.

ChemSusChem. 2019 Jun 21;12(12):2660-2670. doi: 10.1002/cssc.201900781. Epub 2019 Jun 6.

PMID:
30950578
5.

Metabarcoding for stomach-content analyses of Pygmy devil ray (Mobula kuhlii cf. eregoodootenkee): Comparing tissue and ethanol preservative-derived DNA.

Barbato M, Kovacs T, Coleman MA, Broadhurst MK, de Bruyn M.

Ecol Evol. 2019 Feb 1;9(5):2678-2687. doi: 10.1002/ece3.4934. eCollection 2019 Mar.

6.

A Transcriptionally Distinct CXCL13+CD103+CD8+ T-cell Population Is Associated with B-cell Recruitment and Neoantigen Load in Human Cancer.

Workel HH, Lubbers JM, Arnold R, Prins TM, van der Vlies P, de Lange K, Bosse T, van Gool IC, Eggink FA, Wouters MCA, Komdeur FL, van der Slikke EC, Creutzberg CL, Kol A, Plat A, Glaire M, Church DN, Nijman HW, de Bruyn M.

Cancer Immunol Res. 2019 May;7(5):784-796. doi: 10.1158/2326-6066.CIR-18-0517. Epub 2019 Mar 14.

PMID:
30872264
7.

Caregiver socioemotional health as a determinant of child well-being in school-aged and adolescent Ugandan children with and without perinatal HIV exposure.

Webster KD, de Bruyn MM, Zalwango SK, Sikorskii A, Barkin JL, Familiar-Lopez I, Musoke P, Giordani B, Boivin MJ, Ezeamama AE.

Trop Med Int Health. 2019 May;24(5):608-619. doi: 10.1111/tmi.13221. Epub 2019 Mar 13.

PMID:
30809898
8.

Cancer cell-expressed SLAMF7 is not required for CD47-mediated phagocytosis.

He Y, Bouwstra R, Wiersma VR, de Jong M, Jan Lourens H, Fehrmann R, de Bruyn M, Ammatuna E, Huls G, van Meerten T, Bremer E.

Nat Commun. 2019 Feb 1;10(1):533. doi: 10.1038/s41467-018-08013-z.

9.

Range-wide genomic data synthesis reveals transatlantic vicariance and secondary contact in Atlantic cod.

Fairweather R, Bradbury IR, Helyar SJ, de Bruyn M, Therkildsen NO, Bentzen P, Hemmer-Hansen J, Carvalho GR.

Ecol Evol. 2018 Nov 16;8(23):12140-12152. doi: 10.1002/ece3.4672. eCollection 2018 Dec.

10.

Acidity promotes degradation of multi-species environmental DNA in lotic mesocosms.

Seymour M, Durance I, Cosby BJ, Ransom-Jones E, Deiner K, Ormerod SJ, Colbourne JK, Wilgar G, Carvalho GR, de Bruyn M, Edwards F, Emmett BA, Bik HM, Creer S.

Commun Biol. 2018 Jan 22;1:4. doi: 10.1038/s42003-017-0005-3. eCollection 2018.

11.

Antigen-specific active immunotherapy for ovarian cancer.

Paijens ST, Leffers N, Daemen T, Helfrich W, Boezen HM, Cohlen BJ, Melief CJ, de Bruyn M, Nijman HW.

Cochrane Database Syst Rev. 2018 Sep 10;9:CD007287. doi: 10.1002/14651858.CD007287.pub4. Review.

12.

Comparisons of gut microbiota profiles in wild-type and gelatinase B/matrix metalloproteinase-9-deficient mice in acute DSS-induced colitis.

de Bruyn M, Sabino J, Vandeputte D, Vermeire S, Raes J, Opdenakker G.

NPJ Biofilms Microbiomes. 2018 Sep 3;4:18. doi: 10.1038/s41522-018-0059-0. eCollection 2018.

13.

L1CAM expression in uterine carcinosarcoma is limited to the epithelial component and may be involved in epithelial-mesenchymal transition.

Versluis M, Plat A, de Bruyn M, Matias-Guiu X, Trovic J, Krakstad C, Nijman HW, Bosse T, de Bock GH, Hollema H.

Virchows Arch. 2018 Nov;473(5):591-598. doi: 10.1007/s00428-018-2444-8. Epub 2018 Aug 23.

PMID:
30140948
14.

Exploring hidden diversity in Southeast Asia's Dermogenys spp. (Beloniformes: Zenarchopteridae) through DNA barcoding.

Nurul Farhana S, Muchlisin ZA, Duong TY, Tanyaros S, Page LM, Zhao Y, Adamson EAS, Khaironizam MZ, de Bruyn M, Siti Azizah MN.

Sci Rep. 2018 Jul 17;8(1):10787. doi: 10.1038/s41598-018-29049-7.

15.

Failure of MMP-9 antagonists in IBD: demonstrating the importance of molecular biology and well-controlled preclinical studies.

de Bruyn M, Ferrante M.

J Crohns Colitis. 2018 Jul 16. doi: 10.1093/ecco-jcc/jjy102. [Epub ahead of print] No abstract available.

PMID:
30010739
16.

TREM-1, the ideal predictive biomarker for endoscopic healing in anti-TNF-treated Crohn's disease patients?

Verstockt B, Verstockt S, Blevi H, Cleynen I, de Bruyn M, Van Assche G, Vermeire S, Ferrante M.

Gut. 2019 Aug;68(8):1531-1533. doi: 10.1136/gutjnl-2018-316845. Epub 2018 Jul 14. No abstract available.

PMID:
30007919
17.

Refinement of high-risk endometrial cancer classification using DNA damage response biomarkers: a TransPORTEC initiative.

Auguste A, Genestie C, De Bruyn M, Adam J, Le Formal A, Drusch F, Pautier P, Crosbie EJ, MacKay H, Kitchener HC, Powell M, Pollock PM, Mileshkin L, Edmondson RJ, Nout R, Nijman HW, Creutzberg CL, Bosse T, Leary A.

Mod Pathol. 2018 Dec;31(12):1851-1861. doi: 10.1038/s41379-018-0055-1. Epub 2018 Jun 28.

PMID:
29955143
18.

Stepping stones to isolation: Impacts of a changing climate on the connectivity of fragmented fish populations.

Young EF, Tysklind N, Meredith MP, de Bruyn M, Belchier M, Murphy EJ, Carvalho GR.

Evol Appl. 2018 Mar 14;11(6):978-994. doi: 10.1111/eva.12613. eCollection 2018 Jul.

19.

Newly developed serine protease inhibitors decrease visceral hypersensitivity in a post-inflammatory rat model for irritable bowel syndrome.

Ceuleers H, Hanning N, Heirbaut J, Van Remoortel S, Joossens J, Van Der Veken P, Francque SM, De Bruyn M, Lambeir AM, De Man JG, Timmermans JP, Augustyns K, De Meester I, De Winter BY.

Br J Pharmacol. 2018 Sep;175(17):3516-3533. doi: 10.1111/bph.14396. Epub 2018 Jul 23.

20.

Lymphadenectomy and Adjuvant Therapy Improve Survival with Uterine Carcinosarcoma: A Large Retrospective Cohort Study.

Versluis MAC, Pielsticker C, van der Aa MA, de Bruyn M, Hollema H, Nijman HW.

Oncology. 2018;95(2):100-108. doi: 10.1159/000488531. Epub 2018 May 23.

21.

Evidence to Support Monitoring of Vedolizumab Trough Concentrations in Patients With Inflammatory Bowel Diseases.

Dreesen E, Verstockt B, Bian S, de Bruyn M, Compernolle G, Tops S, Noman M, Van Assche G, Ferrante M, Gils A, Vermeire S.

Clin Gastroenterol Hepatol. 2018 Dec;16(12):1937-1946.e8. doi: 10.1016/j.cgh.2018.04.040. Epub 2018 Apr 25.

PMID:
29704680
22.

NOD2 and bacterial recognition as therapeutic targets for Crohn's disease.

de Bruyn M, Vermeire S.

Expert Opin Ther Targets. 2017 Dec;21(12):1123-1139. doi: 10.1080/14728222.2017.1397627. Epub 2017 Nov 2. Review.

PMID:
29096557
23.

The prognostic benefit of tumour-infiltrating Natural Killer cells in endometrial cancer is dependent on concurrent overexpression of Human Leucocyte Antigen-E in the tumour microenvironment.

Versluis MAC, Marchal S, Plat A, de Bock GH, van Hall T, de Bruyn M, Hollema H, Nijman HW.

Eur J Cancer. 2017 Nov;86:285-295. doi: 10.1016/j.ejca.2017.09.008. Epub 2017 Oct 20.

PMID:
29059634
24.

CD103+ tumor-infiltrating lymphocytes are tumor-reactive intraepithelial CD8+ T cells associated with prognostic benefit and therapy response in cervical cancer.

Komdeur FL, Prins TM, van de Wall S, Plat A, Wisman GBA, Hollema H, Daemen T, Church DN, de Bruyn M, Nijman HW.

Oncoimmunology. 2017 Jul 24;6(9):e1338230. doi: 10.1080/2162402X.2017.1338230. eCollection 2017.

25.

The complex evolutionary history and phylogeography of Caridina typus (Crustacea: Decapoda): long-distance dispersal and cryptic allopatric species.

Bernardes SC, Pepato AR, von Rintelen T, von Rintelen K, Page TJ, Freitag H, de Bruyn M.

Sci Rep. 2017 Aug 22;7(1):9044. doi: 10.1038/s41598-017-08494-w.

26.

Plio-Pleistocene phylogeography of the Southeast Asian Blue Panchax killifish, Aplocheilus panchax.

Beck SV, Carvalho GR, Barlow A, Rüber L, Hui Tan H, Nugroho E, Wowor D, Mohd Nor SA, Herder F, Muchlisin ZA, de Bruyn M.

PLoS One. 2017 Jul 25;12(7):e0179557. doi: 10.1371/journal.pone.0179557. eCollection 2017.

27.

Polysaccharide-derived mesoporous materials (Starbon®) for sustainable separation of complex mixtures.

Zuin VG, Budarin VL, De Bruyn M, Shuttleworth PS, Hunt AJ, Pluciennik C, Borisova A, Dodson J, Parker HL, Clark JH.

Faraday Discuss. 2017 Sep 21;202:451-464. doi: 10.1039/c7fd00056a.

PMID:
28660921
28.

Inhibition of gelatinase B/MMP-9 does not attenuate colitis in murine models of inflammatory bowel disease.

de Bruyn M, Breynaert C, Arijs I, De Hertogh G, Geboes K, Thijs G, Matteoli G, Hu J, Van Damme J, Arnold B, Ferrante M, Vermeire S, Van Assche G, Opdenakker G.

Nat Commun. 2017 May 31;8:15384. doi: 10.1038/ncomms15384.

29.

Somatic POLE proofreading domain mutation, immune response, and prognosis in colorectal cancer: a retrospective, pooled biomarker study.

Domingo E, Freeman-Mills L, Rayner E, Glaire M, Briggs S, Vermeulen L, Fessler E, Medema JP, Boot A, Morreau H, van Wezel T, Liefers GJ, Lothe RA, Danielsen SA, Sveen A, Nesbakken A, Zlobec I, Lugli A, Koelzer VH, Berger MD, Castellví-Bel S, Muñoz J; Epicolon consortium, de Bruyn M, Nijman HW, Novelli M, Lawson K, Oukrif D, Frangou E, Dutton P, Tejpar S, Delorenzi M, Kerr R, Kerr D, Tomlinson I, Church DN.

Lancet Gastroenterol Hepatol. 2016 Nov;1(3):207-216. doi: 10.1016/S2468-1253(16)30014-0. Epub 2016 Jul 20.

PMID:
28404093
30.

Subtle Microwave-Induced Overheating Effects in an Industrial Demethylation Reaction and Their Direct Use in the Development of an Innovative Microwave Reactor.

De Bruyn M, Budarin VL, Sturm GSJ, Stefanidis GD, Radoiu M, Stankiewicz A, Macquarrie DJ.

J Am Chem Soc. 2017 Apr 19;139(15):5431-5436. doi: 10.1021/jacs.7b00689. Epub 2017 Apr 5.

PMID:
28345911
31.

Immunological profiling of molecularly classified high-risk endometrial cancers identifies POLE-mutant and microsatellite unstable carcinomas as candidates for checkpoint inhibition.

Eggink FA, Van Gool IC, Leary A, Pollock PM, Crosbie EJ, Mileshkin L, Jordanova ES, Adam J, Freeman-Mills L, Church DN, Creutzberg CL, De Bruyn M, Nijman HW, Bosse T.

Oncoimmunology. 2016 Dec 9;6(2):e1264565. doi: 10.1080/2162402X.2016.1264565. eCollection 2017.

32.

Antibody-Based Cancer Therapy: Successful Agents and Novel Approaches.

Hendriks D, Choi G, de Bruyn M, Wiersma VR, Bremer E.

Int Rev Cell Mol Biol. 2017;331:289-383. doi: 10.1016/bs.ircmb.2016.10.002. Epub 2017 Jan 27. Review.

PMID:
28325214
33.

Forensic application of DNA barcoding for identification of illegally traded African pangolin scales.

Mwale M, Dalton DL, Jansen R, De Bruyn M, Pietersen D, Mokgokong PS, Kotzé A.

Genome. 2017 Mar;60(3):272-284. doi: 10.1139/gen-2016-0144. Epub 2016 Oct 27.

PMID:
28177847
34.

Epithelial organoid cultures from patients with ulcerative colitis and Crohn's disease: a truly long-term model to study the molecular basis for inflammatory bowel disease?

Noben M, Verstockt B, de Bruyn M, Hendriks N, Van Assche G, Vermeire S, Verfaillie C, Ferrante M.

Gut. 2017 Dec;66(12):2193-2195. doi: 10.1136/gutjnl-2016-313667. Epub 2017 Feb 3. No abstract available.

PMID:
28159838
35.

Intelligent Approach to Solvent Substitution: The Identification of a New Class of Levoglucosenone Derivatives.

Alves Costa Pacheco A, Sherwood J, Zhenova A, McElroy CR, Hunt AJ, Parker HL, Farmer TJ, Constantinou A, De Bruyn M, Whitwood AC, Raverty W, Clark JH.

ChemSusChem. 2016 Dec 20;9(24):3503-3512. doi: 10.1002/cssc.201600795. Epub 2016 Nov 17.

PMID:
27860452
36.

Effect of vedolizumab (anti-α4β7-integrin) therapy on histological healing and mucosal gene expression in patients with UC.

Arijs I, De Hertogh G, Lemmens B, Van Lommel L, de Bruyn M, Vanhove W, Cleynen I, Machiels K, Ferrante M, Schuit F, Van Assche G, Rutgeerts P, Vermeire S.

Gut. 2018 Jan;67(1):43-52. doi: 10.1136/gutjnl-2016-312293. Epub 2016 Oct 7.

PMID:
27802155
37.

Genetic Deletion of Tissue Inhibitor of Metalloproteinase-1/TIMP-1 Alters Inflammation and Attenuates Fibrosis in Dextran Sodium Sulphate-induced Murine Models of Colitis.

Breynaert C, de Bruyn M, Arijs I, Cremer J, Martens E, Van Lommel L, Geboes K, De Hertogh G, Schuit F, Ferrante M, Vermeire S, Ceuppens J, Opdenakker G, Van Assche G.

J Crohns Colitis. 2016 Nov;10(11):1336-1350. Epub 2016 May 17.

PMID:
27194531
38.

Microsatellite instability derived JAK1 frameshift mutations are associated with tumor immune evasion in endometrioid endometrial cancer.

Stelloo E, Versluis MA, Nijman HW, de Bruyn M, Plat A, Osse EM, van Dijk RH, Nout RA, Creutzberg CL, de Bock GH, Smit VT, Bosse T, Hollema H.

Oncotarget. 2016 Jun 28;7(26):39885-39893. doi: 10.18632/oncotarget.9414.

39.

The molecular biology of matrix metalloproteinases and tissue inhibitors of metalloproteinases in inflammatory bowel diseases.

de Bruyn M, Vandooren J, Ugarte-Berzal E, Arijs I, Vermeire S, Opdenakker G.

Crit Rev Biochem Mol Biol. 2016 Sep;51(5):295-358. Epub 2016 Jun 30. Review.

PMID:
27362691
40.

DNA Barcoding Reveals High Cryptic Diversity of the Freshwater Halfbeak Genus Hemirhamphodon from Sundaland.

Lim H, Zainal Abidin M, Pulungan CP, de Bruyn M, Mohd Nor SA.

PLoS One. 2016 Sep 22;11(9):e0163596. doi: 10.1371/journal.pone.0163596. eCollection 2016.

41.

CD103+ intraepithelial T cells in high-grade serous ovarian cancer are phenotypically diverse TCRαβ+ CD8αβ+ T cells that can be targeted for cancer immunotherapy.

Komdeur FL, Wouters MC, Workel HH, Tijans AM, Terwindt AL, Brunekreeft KL, Plat A, Klip HG, Eggink FA, Leffers N, Helfrich W, Samplonius DF, Bremer E, Wisman GB, Daemen T, Duiker EW, Hollema H, Nijman HW, de Bruyn M.

Oncotarget. 2016 Nov 15;7(46):75130-75144. doi: 10.18632/oncotarget.12077.

42.

Size matters: Survival benefit conferred by intratumoral T cells is dependent on surgical outcome, treatment sequence and T cell differentiation.

Wouters MC, Komdeur FL, de Bruyn M, Nijman HW.

Oncoimmunology. 2016 Jan 4;5(5):e1122863. doi: 10.1080/2162402X.2015.1122863. eCollection 2016 May.

43.

CD103 defines intraepithelial CD8+ PD1+ tumour-infiltrating lymphocytes of prognostic significance in endometrial adenocarcinoma.

Workel HH, Komdeur FL, Wouters MC, Plat A, Klip HG, Eggink FA, Wisman GB, Arts HJ, Oonk MH, Mourits MJ, Yigit R, Versluis M, Duiker EW, Hollema H, de Bruyn M, Nijman HW.

Eur J Cancer. 2016 Jun;60:1-11. doi: 10.1016/j.ejca.2016.02.026. Epub 2016 Mar 31.

PMID:
27038842
44.

Population differentiation in the context of Holocene climate change for a migratory marine species, the southern elephant seal.

Corrigan LJ, Fabiani A, Chauke LF, McMahon CR, de Bruyn M, Bester MN, Bastos A, Campagna C, Muelbert MM, Hoelzel AR.

J Evol Biol. 2016 Sep;29(9):1667-79. doi: 10.1111/jeb.12870. Epub 2016 Jun 7.

45.

An Interesting Class of Porous Polymer--Revisiting the Structure of Mesoporous α-D-Polysaccharide Gels.

White RJ, Shuttleworth PS, Budarin VL, De Bruyn M, Fischer A, Clark JH.

ChemSusChem. 2016 Feb 8;9(3):280-8. doi: 10.1002/cssc.201501354. Epub 2016 Jan 19.

PMID:
26785060
46.

Specific members of the predominant gut microbiota predict pouchitis following colectomy and IPAA in UC.

Machiels K, Sabino J, Vandermosten L, Joossens M, Arijs I, de Bruyn M, Eeckhaut V, Van Assche G, Ferrante M, Verhaegen J, Van Steen K, Van Immerseel F, Huys G, Verbeke K, Wolthuis A, de Buck Van Overstraeten A, D'Hoore A, Rutgeerts P, Vermeire S.

Gut. 2017 Jan;66(1):79-88. doi: 10.1136/gutjnl-2015-309398. Epub 2015 Sep 30.

PMID:
26423113
47.

Treatment Regimen, Surgical Outcome, and T-cell Differentiation Influence Prognostic Benefit of Tumor-Infiltrating Lymphocytes in High-Grade Serous Ovarian Cancer.

Wouters MC, Komdeur FL, Workel HH, Klip HG, Plat A, Kooi NM, Wisman GB, Mourits MJ, Arts HJ, Oonk MH, Yigit R, de Jong S, Melief CJ, Hollema H, Duiker EW, Daemen T, de Bruyn M, Nijman HW.

Clin Cancer Res. 2016 Feb 1;22(3):714-24. doi: 10.1158/1078-0432.CCR-15-1617. Epub 2015 Sep 18.

48.

A Matrix-based Model Predicts Primary Response to Infliximab in Crohn's Disease.

Billiet T, Papamichael K, de Bruyn M, Verstockt B, Cleynen I, Princen F, Singh S, Ferrante M, Van Assche G, Vermeire S.

J Crohns Colitis. 2015 Dec;9(12):1120-6. doi: 10.1093/ecco-jcc/jjv156. Epub 2015 Sep 7.

PMID:
26351386
49.

Serum Neutrophil Gelatinase B-associated Lipocalin and Matrix Metalloproteinase-9 Complex as a Surrogate Marker for Mucosal Healing in Patients with Crohn's Disease.

de Bruyn M, Arijs I, De Hertogh G, Ferrante M, Van Assche G, Rutgeerts P, Vermeire S, Opdenakker G.

J Crohns Colitis. 2015 Dec;9(12):1079-87. doi: 10.1093/ecco-jcc/jjv148. Epub 2015 Sep 7.

PMID:
26351381
50.

CD20+inflammatory T-cells are present in blood and brain of multiple sclerosis patients and can be selectively targeted for apoptotic elimination.

Holley JE, Bremer E, Kendall AC, de Bruyn M, Helfrich W, Tarr JM, Newcombe J, Gutowski NJ, Eggleton P.

Mult Scler Relat Disord. 2014 Sep;3(5):650-8. doi: 10.1016/j.msard.2014.06.001. Epub 2014 Jun 12.

PMID:
26265276

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