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Items: 1 to 20 of 79

1.

Phylogenetic Clustering of Genes Reveals Shared Evolutionary Trajectories and Putative Gene Functions.

Liu C, Wright B, Allen-Vercoe E, Gu H, Beiko R.

Genome Biol Evol. 2018 Sep 1;10(9):2255-2265. doi: 10.1093/gbe/evy178.

2.

Considerations for Best Practices in Studies of Fiber or Other Dietary Components and the Intestinal Microbiome.

Klurfeld DM, Davis CD, Karp RW, Allen-Vercoe E, Chang EB, Chassaing B, Fahey GC, Hamaker BR, Holscher HD, Lampe JW, Marette A, Martens E, O'Keefe SJ, Rose DJ, Saarela M, Schneeman BO, Slavin JL, Sonnenburg JL, Swanson KS, Wu GD, Lynch CJ.

Am J Physiol Endocrinol Metab. 2018 Aug 21. doi: 10.1152/ajpendo.00058.2018. [Epub ahead of print]

PMID:
30130151
3.

Using bioreactors to study the effects of drugs on the human microbiota.

Guzman-Rodriguez M, McDonald JAK, Hyde R, Allen-Vercoe E, Claud EC, Sheth PM, Petrof EO.

Methods. 2018 Aug 11. pii: S1046-2023(17)30439-5. doi: 10.1016/j.ymeth.2018.08.003. [Epub ahead of print] Review.

PMID:
30102990
4.

Moderate Renal Impairment and Toxic Metabolites Produced by the Intestinal Microbiome: Dietary Implications.

Pignanelli M, Bogiatzi C, Gloor G, Allen-Vercoe E, Reid G, Urquhart BL, Ruetz KN, Velenosi TJ, Spence JD.

J Ren Nutr. 2018 Aug 9. pii: S1051-2276(18)30128-6. doi: 10.1053/j.jrn.2018.05.007. [Epub ahead of print]

PMID:
30100156
5.

Guelph Family Health Study: pilot study of a home-based obesity prevention intervention.

Haines J, Douglas S, Mirotta JA, O'Kane C, Breau R, Walton K, Krystia O, Chamoun E, Annis A, Darlington GA, Buchholz AC, Duncan AM, Vallis LA, Spriet LL, Mutch DM, Brauer P, Allen-Vercoe E, Taveras EM, Ma DWL; Guelph Family Health Study.

Can J Public Health. 2018 Apr 25. doi: 10.17269/s41997-018-0072-3. [Epub ahead of print]

PMID:
29981086
6.

Mediterranean Diet Score: Associations with Metabolic Products of the Intestinal Microbiome, Carotid Plaque Burden, and Renal Function.

Pignanelli M, Just C, Bogiatzi C, Dinculescu V, Gloor GB, Allen-Vercoe E, Reid G, Urquhart BL, Ruetz KN, Velenosi TJ, Spence JD.

Nutrients. 2018 Jun 16;10(6). pii: E779. doi: 10.3390/nu10060779.

7.

Data on the gut and saliva microbiota from a cohort of atherosclerosis patients determined by 16S rRNA gene sequencing.

Gloor GB, Wong RG, Allen-Vercoe E, Dinculescu V, Pignanelli M, Bogiatzi C, Reid G, Spence JD.

Data Brief. 2018 May 11;19:481-485. doi: 10.1016/j.dib.2018.05.032. eCollection 2018 Aug.

8.

Metabolic products of the intestinal microbiome and extremes of atherosclerosis.

Bogiatzi C, Gloor G, Allen-Vercoe E, Reid G, Wong RG, Urquhart BL, Dinculescu V, Ruetz KN, Velenosi TJ, Pignanelli M, Spence JD.

Atherosclerosis. 2018 Jun;273:91-97. doi: 10.1016/j.atherosclerosis.2018.04.015. Epub 2018 Apr 17.

PMID:
29702430
9.

The Human Gut Microbial Metabolome Modulates Fungal Growth via the TOR Signaling Pathway.

García C, Tebbji F, Daigneault M, Liu NN, Köhler JR, Allen-Vercoe E, Sellam A.

mSphere. 2017 Dec 13;2(6). pii: e00555-17. doi: 10.1128/mSphere.00555-17. eCollection 2017 Nov-Dec.

10.

Protease-Mediated Suppression of DRG Neuron Excitability by Commensal Bacteria.

Sessenwein JL, Baker CC, Pradhananga S, Maitland ME, Petrof EO, Allen-Vercoe E, Noordhof C, Reed DE, Vanner SJ, Lomax AE.

J Neurosci. 2017 Nov 29;37(48):11758-11768. doi: 10.1523/JNEUROSCI.1672-17.2017. Epub 2017 Oct 31.

11.

A chemical and biological toolbox for Type Vd secretion: Characterization of the phospholipase A1 autotransporter FplA from Fusobacterium nucleatum.

Casasanta MA, Yoo CC, Smith HB, Duncan AJ, Cochrane K, Varano AC, Allen-Vercoe E, Slade DJ.

J Biol Chem. 2017 Dec 8;292(49):20240-20254. doi: 10.1074/jbc.M117.819144. Epub 2017 Oct 11.

12.

Towards standards for human fecal sample processing in metagenomic studies.

Costea PI, Zeller G, Sunagawa S, Pelletier E, Alberti A, Levenez F, Tramontano M, Driessen M, Hercog R, Jung FE, Kultima JR, Hayward MR, Coelho LP, Allen-Vercoe E, Bertrand L, Blaut M, Brown JRM, Carton T, Cools-Portier S, Daigneault M, Derrien M, Druesne A, de Vos WM, Finlay BB, Flint HJ, Guarner F, Hattori M, Heilig H, Luna RA, van Hylckama Vlieg J, Junick J, Klymiuk I, Langella P, Le Chatelier E, Mai V, Manichanh C, Martin JC, Mery C, Morita H, O'Toole PW, Orvain C, Patil KR, Penders J, Persson S, Pons N, Popova M, Salonen A, Saulnier D, Scott KP, Singh B, Slezak K, Veiga P, Versalovic J, Zhao L, Zoetendal EG, Ehrlich SD, Dore J, Bork P.

Nat Biotechnol. 2017 Nov;35(11):1069-1076. doi: 10.1038/nbt.3960. Epub 2017 Oct 2.

PMID:
28967887
13.

Microbial Interactions and Interventions in Colorectal Cancer.

Van Raay T, Allen-Vercoe E.

Microbiol Spectr. 2017 Jun;5(3). doi: 10.1128/microbiolspec.BAD-0004-2016. Review.

PMID:
28643625
14.

Impact of food grade and nano-TiO2 particles on a human intestinal community.

Dudefoi W, Moniz K, Allen-Vercoe E, Ropers MH, Walker VK.

Food Chem Toxicol. 2017 Aug;106(Pt A):242-249. doi: 10.1016/j.fct.2017.05.050. Epub 2017 May 28.

15.

Corrigendum: Intestinal microbiota as a tetrahydrobiopterin exogenous source in hph-1 mice.

Belik J, Shifrin Y, Arning E, Bottiglieri T, Pan J, Daigneault MC, Allen-Vercoe E.

Sci Rep. 2017 Apr 11;7:44161. doi: 10.1038/srep44161. No abstract available.

16.

Intestinal microbiota as a tetrahydrobiopterin exogenous source in hph-1 mice.

Belik J, Shifrin Y, Arning E, Bottiglieri T, Pan J, Daigneault MC, Allen-Vercoe E.

Sci Rep. 2017 Jan 12;7:39854. doi: 10.1038/srep39854. Erratum in: Sci Rep. 2017 Apr 11;7:44161.

17.

Fecal Microbiota-based Therapeutics for Recurrent Clostridium difficile Infection, Ulcerative Colitis and Obesity.

Carlucci C, Petrof EO, Allen-Vercoe E.

EBioMedicine. 2016 Nov;13:37-45. doi: 10.1016/j.ebiom.2016.09.029. Epub 2016 Oct 1. Review.

18.

A human gut ecosystem protects against C. difficile disease by targeting TcdA.

Martz SL, Guzman-Rodriguez M, He SM, Noordhof C, Hurlbut DJ, Gloor GB, Carlucci C, Weese S, Allen-Vercoe E, Sun J, Claud EC, Petrof EO.

J Gastroenterol. 2017 Apr;52(4):452-465. doi: 10.1007/s00535-016-1232-y. Epub 2016 Jun 21.

19.

A review of the associations between single nucleotide polymorphisms in taste receptors, eating behaviors, and health.

Chamoun E, Mutch DM, Allen-Vercoe E, Buchholz AC, Duncan AM, Spriet LL, Haines J, Ma DWL; Guelph Family Health Study.

Crit Rev Food Sci Nutr. 2018 Jan 22;58(2):194-207. doi: 10.1080/10408398.2016.1152229. Epub 2017 Jul 21. Review.

PMID:
27247080
20.

Rebooting the microbiome.

Munoz S, Guzman-Rodriguez M, Sun J, Zhang YG, Noordhof C, He SM, Allen-Vercoe E, Claud EC, Petrof EO.

Gut Microbes. 2016 Jul 3;7(4):353-363. Epub 2016 May 13.

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