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Items: 14

1.

COSSMO: predicting competitive alternative splice site selection using deep learning.

Bretschneider H, Gandhi S, Deshwar AG, Zuberi K, Frey BJ.

Bioinformatics. 2018 Jul 1;34(13):i429-i437. doi: 10.1093/bioinformatics/bty244.

2.

Outcomes from 18 years of cervical spine surgery in MPS IVA: a single centre's experience.

Broomfield A, Zuberi K, Mercer J, Moss G, Finnegan N, Hensman P, Walker R, Bukhari S, Wright NB, Stewart F, Jones SA, Ramirez R.

Childs Nerv Syst. 2018 Sep;34(9):1705-1716. doi: 10.1007/s00381-018-3823-9. Epub 2018 Jun 26.

PMID:
29946810
3.

GeneMANIA update 2018.

Franz M, Rodriguez H, Lopes C, Zuberi K, Montojo J, Bader GD, Morris Q.

Nucleic Acids Res. 2018 Jul 2;46(W1):W60-W64. doi: 10.1093/nar/gky311.

4.

Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli.

Vlasblom J, Zuberi K, Rodriguez H, Arnold R, Gagarinova A, Deineko V, Kumar A, Leung E, Rizzolo K, Samanfar B, Chang L, Phanse S, Golshani A, Greenblatt JF, Houry WA, Emili A, Morris Q, Bader G, Babu M.

Bioinformatics. 2015 Feb 1;31(3):306-10. doi: 10.1093/bioinformatics/btu671. Epub 2014 Oct 13.

5.

GeneMANIA: Fast gene network construction and function prediction for Cytoscape.

Montojo J, Zuberi K, Rodriguez H, Bader GD, Morris Q.

F1000Res. 2014 Jul 1;3:153. doi: 10.12688/f1000research.4572.1. eCollection 2014.

6.

Network Assessor: an automated method for quantitative assessment of a network's potential for gene function prediction.

Montojo J, Zuberi K, Shao Q, Bader GD, Morris Q.

Front Genet. 2014 May 16;5:123. doi: 10.3389/fgene.2014.00123. eCollection 2014.

7.

Novel cardiovascular gene functions revealed via systematic phenotype prediction in zebrafish.

Musso G, Tasan M, Mosimann C, Beaver JE, Plovie E, Carr LA, Chua HN, Dunham J, Zuberi K, Rodriguez H, Morris Q, Zon L, Roth FP, MacRae CA.

Development. 2014 Jan;141(1):224-35. doi: 10.1242/dev.099796.

8.

GeneMANIA prediction server 2013 update.

Zuberi K, Franz M, Rodriguez H, Montojo J, Lopes CT, Bader GD, Morris Q.

Nucleic Acids Res. 2013 Jul;41(Web Server issue):W115-22. doi: 10.1093/nar/gkt533.

9.

Serum PTH and ionized calcium levels as predictors of symptomatic hypocalcemia after parathyroidectomy.

Zuberi KA, Urquhart AC.

Laryngoscope. 2010;120 Suppl 4:S192. doi: 10.1002/lary.21656.

PMID:
21225790
10.

RBPDB: a database of RNA-binding specificities.

Cook KB, Kazan H, Zuberi K, Morris Q, Hughes TR.

Nucleic Acids Res. 2011 Jan;39(Database issue):D301-8. doi: 10.1093/nar/gkq1069. Epub 2010 Oct 29.

11.

GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop.

Montojo J, Zuberi K, Rodriguez H, Kazi F, Wright G, Donaldson SL, Morris Q, Bader GD.

Bioinformatics. 2010 Nov 15;26(22):2927-8. doi: 10.1093/bioinformatics/btq562. Epub 2010 Oct 5.

12.

The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function.

Warde-Farley D, Donaldson SL, Comes O, Zuberi K, Badrawi R, Chao P, Franz M, Grouios C, Kazi F, Lopes CT, Maitland A, Mostafavi S, Montojo J, Shao Q, Wright G, Bader GD, Morris Q.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W214-20. doi: 10.1093/nar/gkq537.

13.

The evidence for technical considerations in pancreatic resections for malignancy.

Martin RF, Zuberi KA.

Surg Clin North Am. 2010 Apr;90(2):265-85. doi: 10.1016/j.suc.2010.01.001.

PMID:
20362786
14.

The top 10 list for a safe and effective sign-out.

Kemp CD, Bath JM, Berger J, Bergsman A, Ellison T, Emery K, Garonzik-Wang J, Hui-Chou HG, Mayo SC, Serrano OK, Shridharani S, Zuberi K, Lipsett PA, Freischlag JA.

Arch Surg. 2008 Oct;143(10):1008-10. doi: 10.1001/archsurg.143.10.1008.

PMID:
18936381

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