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Items: 1 to 50 of 72

1.

Primate piRNA Cluster Evolution Suggests Limited Relevance of Pseudogenes in piRNA-Mediated Gene Regulation.

Gebert D, Zischler H, Rosenkranz D.

Genome Biol Evol. 2019 Apr 1;11(4):1088-1104. doi: 10.1093/gbe/evz060.

2.

Temperature-responsive miRNAs in Drosophila orchestrate adaptation to different ambient temperatures.

Fast I, Hewel C, Wester L, Schumacher J, Gebert D, Zischler H, Berger C, Rosenkranz D.

RNA. 2017 Sep;23(9):1352-1364. doi: 10.1261/rna.061119.117. Epub 2017 Jun 19.

3.

Effects of different kinds of essentiality on sequence evolution of human testis proteins.

Schumacher J, Zischler H, Herlyn H.

Sci Rep. 2017 Mar 8;7:43534. doi: 10.1038/srep43534.

4.

The pioneering role of PRDM9 indel mutations in tarsier evolution.

Heerschop S, Zischler H, Merker S, Perwitasari-Farajallah D, Driller C.

Sci Rep. 2016 Oct 4;6:34618. doi: 10.1038/srep34618.

5.

Remarkable ancient divergences amongst neglected lorisiform primates.

Pozzi L, Nekaris KA, Perkin A, Bearder SK, Pimley ER, Schulze H, Streicher U, Nadler T, Kitchener A, Zischler H, Zinner D, Roos C.

Zool J Linn Soc. 2015 Nov;175(3):661-674. Epub 2015 Jun 15.

6.

Stop and Go - Waves of Tarsier Dispersal Mirror the Genesis of Sulawesi Island.

Driller C, Merker S, Perwitasari-Farajallah D, Sinaga W, Anggraeni N, Zischler H.

PLoS One. 2015 Nov 11;10(11):e0141212. doi: 10.1371/journal.pone.0141212. eCollection 2015.

7.

Piwi proteins and piRNAs in mammalian oocytes and early embryos: From sample to sequence.

Rosenkranz D, Han CT, Roovers EF, Zischler H, Ketting RF.

Genom Data. 2015 Jul 10;5:309-13. doi: 10.1016/j.gdata.2015.06.026. eCollection 2015 Sep.

8.

piRNAs from Pig Testis Provide Evidence for a Conserved Role of the Piwi Pathway in Post-Transcriptional Gene Regulation in Mammals.

Gebert D, Ketting RF, Zischler H, Rosenkranz D.

PLoS One. 2015 May 7;10(5):e0124860. doi: 10.1371/journal.pone.0124860. eCollection 2015.

9.

Piwi proteins and piRNAs in mammalian oocytes and early embryos.

Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.

Cell Rep. 2015 Mar 31;10(12):2069-82. doi: 10.1016/j.celrep.2015.02.062. Epub 2015 Mar 26.

10.

Tupaia small RNAs provide insights into function and evolution of RNAi-based transposon defense in mammals.

Rosenkranz D, Rudloff S, Bastuck K, Ketting RF, Zischler H.

RNA. 2015 May;21(5):911-22. doi: 10.1261/rna.048603.114. Epub 2015 Mar 23.

11.

Profiling of RNA modifications by multiplexed stable isotope labelling.

Kellner S, Neumann J, Rosenkranz D, Lebedeva S, Ketting RF, Zischler H, Schneider D, Helm M.

Chem Commun (Camb). 2014 Apr 4;50(26):3516-8. doi: 10.1039/c3cc49114e. Epub 2014 Feb 24.

PMID:
24567952
12.

Evolutionary conservation of mammalian sperm proteins associates with overall, not tyrosine, phosphorylation in human spermatozoa.

Schumacher J, Ramljak S, Asif AR, Schaffrath M, Zischler H, Herlyn H.

J Proteome Res. 2013 Dec 6;12(12):5370-82. doi: 10.1021/pr400228c. Epub 2013 Sep 27.

PMID:
23919900
13.

A comparative analysis to study editing of small noncoding BC200- and Alu transcripts in brain of prion-inoculated rhesus monkeys (M. Mulatta).

Kiesel P, Kues A, Kaup FJ, Bodemer W, Gibson TJ, Zischler H.

J Toxicol Environ Health A. 2012;75(7):391-401. doi: 10.1080/15287394.2012.670896.

PMID:
22524594
14.

Methylation and expression analyses of the 7q autism susceptibility locus genes MEST , COPG2, and TSGA14 in human and anthropoid primate cortices.

Schneider E, Mayer S, El Hajj N, Jensen LR, Kuss AW, Zischler H, Kondova I, Bontrop RE, Navarro B, Fuchs E, Zechner U, Haaf T.

Cytogenet Genome Res. 2012;136(4):278-87. doi: 10.1159/000337298. Epub 2012 Mar 24.

15.

Prion infected rhesus monkeys to study differential transcription of Alu DNA elements and editing of Alu transcripts in neuronal cells and blood cells.

Kiesel P, Bodemer W, Gibson T, Zischler H, Kaup FJ.

J Med Primatol. 2012 Jun;41(3):176-82. doi: 10.1111/j.1600-0684.2012.00535.x. Epub 2012 Mar 2.

PMID:
22380733
16.

proTRAC--a software for probabilistic piRNA cluster detection, visualization and analysis.

Rosenkranz D, Zischler H.

BMC Bioinformatics. 2012 Jan 10;13:5. doi: 10.1186/1471-2105-13-5.

17.

Sexual size dimorphism predicts rates of sequence evolution of SPerm Adhesion Molecule 1 (SPAM1, also PH-20) in monkeys, but not in hominoids (apes including humans).

Prothmann A, Laube I, Dietz J, Roos C, Mengel K, Zischler H, Herlyn H.

Mol Phylogenet Evol. 2012 Apr;63(1):52-63. doi: 10.1016/j.ympev.2011.12.008. Epub 2011 Dec 14.

PMID:
22197807
18.

Possible editing of Alu transcripts in blood cells of sporadic Creutzfeldt-Jakob disease (sCJD).

Kiesel P, Gibson TJ, Ciesielczyk B, Bodemer M, Kaup FJ, Bodemer W, Zischler H, Zerr I.

J Toxicol Environ Health A. 2011;74(2-4):88-95. doi: 10.1080/15287394.2011.529057.

PMID:
21218337
19.

Retroposon insertions provide insights into deep lagomorph evolution.

Kriegs JO, Zemann A, Churakov G, Matzke A, Ohme M, Zischler H, Brosius J, Kryger U, Schmitz J.

Mol Biol Evol. 2010 Dec;27(12):2678-81. doi: 10.1093/molbev/msq162. Epub 2010 Jun 28.

PMID:
20584773
20.

Accelerated evolution of Fetuin-A (FETUA, also AHSG) is driven by positive Darwinian selection, not GC-biased gene conversion.

Döring Y, Zechner U, Roos C, Rosenkranz D, Zischler H, Herlyn H.

Gene. 2010 Sep 1;463(1-2):49-55. doi: 10.1016/j.gene.2010.04.018. Epub 2010 May 13.

PMID:
20471458
21.

Transcription of Alu DNA elements in blood cells of sporadic Creutzfeldt-Jakob disease (sCJD).

Kiesel P, Gibson TJ, Ciesielczyk B, Bodemer M, Kaup FJ, Bodemer W, Zischler H, Zerr I.

Prion. 2010 Apr-Jun;4(2):87-93. Epub 2010 Apr 5.

22.

Positive selection at codon 38 of the human KCNE1 (= minK) gene and sporadic absence of 38Ser-coding mRNAs in Gly38Ser heterozygotes.

Herlyn H, Zechner U, Oswald F, Pfeufer A, Zischler H, Haaf T.

BMC Evol Biol. 2009 Aug 6;9:188. doi: 10.1186/1471-2148-9-188.

23.

Elucidating geological and biological processes underlying the diversification of Sulawesi tarsiers.

Merker S, Driller C, Perwitasari-Farajallah D, Pamungkas J, Zischler H.

Proc Natl Acad Sci U S A. 2009 May 26;106(21):8459-64. doi: 10.1073/pnas.0900319106. Epub 2009 May 18.

24.

Differences in DNA methylation patterns and expression of the CCRK gene in human and nonhuman primate cortices.

Farcas R, Schneider E, Frauenknecht K, Kondova I, Bontrop R, Bohl J, Navarro B, Metzler M, Zischler H, Zechner U, Daser A, Haaf T.

Mol Biol Evol. 2009 Jun;26(6):1379-89. doi: 10.1093/molbev/msp046. Epub 2009 Mar 12.

PMID:
19282513
25.

Hybridization between mouse lemurs in an ecological transition zone in southern Madagascar.

Gligor M, Ganzhorn JU, Rakotondravony D, Ramilijaona OR, Razafimahatratra E, Zischler H, Hapke A.

Mol Ecol. 2009 Feb;18(3):520-33. doi: 10.1111/j.1365-294X.2008.04040.x.

PMID:
19161471
26.

Primate genomes.

Herlyn H, Zischler H.

Genome Dyn. 2006;2:17-32. doi: 10.1159/000095090. Review.

PMID:
18753766
27.

The molecular evolution of sperm zonadhesin.

Herlyn H, Zischler H.

Int J Dev Biol. 2008;52(5-6):781-90. doi: 10.1387/ijdb.082626hh. Review.

28.

Development of the first marmoset-specific DNA microarray (EUMAMA): a new genetic tool for large-scale expression profiling in a non-human primate.

Datson NA, Morsink MC, Atanasova S, Armstrong VW, Zischler H, Schlumbohm C, Dutilh BE, Huynen MA, Waegele B, Ruepp A, de Kloet ER, Fuchs E.

BMC Genomics. 2007 Jun 25;8:190.

29.
30.

Repeat expansion in spinocerebellar ataxia type 17 alleles of the TATA-box binding protein gene: an evolutionary approach.

Tomiuk J, Bachmann L, Bauer C, Rolfs A, Schöls L, Roos C, Zischler H, Schuler MM, Bruntner S, Riess O, Bauer P.

Eur J Hum Genet. 2007 Jan;15(1):81-7. Epub 2006 Oct 11. Erratum in: Eur J Hum Genet. 2008 May;16(5):661.

31.
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33.

Forty million years of independent evolution: a mitochondrial gene and its corresponding nuclear pseudogene in primates.

Schmitz J, Piskurek O, Zischler H.

J Mol Evol. 2005 Jul;61(1):1-11. Epub 2005 Jun 29.

PMID:
16007490
35.

Primate phylogeny: molecular evidence from retroposons.

Schmitz J, Roos C, Zischler H.

Cytogenet Genome Res. 2005;108(1-3):26-37. Review.

PMID:
15545713
36.

A novel class of mammalian-specific tailless retropseudogenes.

Schmitz J, Churakov G, Zischler H, Brosius J.

Genome Res. 2004 Oct;14(10A):1911-5. Epub 2004 Sep 13.

37.

Primate jumping genes elucidate strepsirrhine phylogeny.

Roos C, Schmitz J, Zischler H.

Proc Natl Acad Sci U S A. 2004 Jul 20;101(29):10650-4. Epub 2004 Jul 12.

38.

Molecular phylogeny of Mentawai macaques: taxonomic and biogeographic implications.

Roos C, Ziegler T, Hodges JK, Zischler H, Abegg C.

Mol Phylogenet Evol. 2003 Oct;29(1):139-50.

PMID:
12967615
39.
40.

A promoter that acquired p53 responsiveness during primate evolution.

Contente A, Zischler H, Einspanier A, Dobbelstein M.

Cancer Res. 2003 Apr 15;63(8):1756-8.

41.

Molecular cladistic markers in New World monkey phylogeny (Platyrrhini, Primates).

Singer SS, Schmitz J, Schwiegk C, Zischler H.

Mol Phylogenet Evol. 2003 Mar;26(3):490-501.

PMID:
12644406
42.

The syndermatan phylogeny and the evolution of acanthocephalan endoparasitism as inferred from 18S rDNA sequences.

Herlyn H, Piskurek O, Schmitz J, Ehlers U, Zischler H.

Mol Phylogenet Evol. 2003 Jan;26(1):155-64.

PMID:
12470946
43.

The colugo (Cynocephalus variegatus, Dermoptera): the primates' gliding sister?

Schmitz J, Ohme M, Suryobroto B, Zischler H.

Mol Biol Evol. 2002 Dec;19(12):2308-12.

PMID:
12446821
45.

HERV-K(OLD): ancestor sequences of the human endogenous retrovirus family HERV-K(HML-2).

Reus K, Mayer J, Sauter M, Zischler H, Müller-Lantzsch N, Meese E.

J Virol. 2001 Oct;75(19):8917-26.

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50.

Novel mitochondrial DNA insertion polymorphism and its usefulness for human population studies.

Thomas R, Zischler H, Pääbo S, Stoneking M.

Hum Biol. 1996 Dec;68(6):847-54.

PMID:
8979460

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